Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5348
Gene name
Locationscaffold_435:10158..11541
Strand+
Gene length (bp)1383
Transcript length (bp)1251
Coding sequence length (bp)1248
Protein length (aa) 416

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 1.2E-07 13 43
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 4.2E-06 82 183

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q59QC7|UPC2_CANAL Sterol uptake control protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UPC2 PE=1 SV=1 61 351 3.0E-09
sp|Q59QC7|UPC2_CANAL Sterol uptake control protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UPC2 PE=1 SV=1 4 48 3.0E-08

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0140110 transcription regulator activity No
GO:0031323 regulation of cellular metabolic process No
GO:0065007 biological regulation No
GO:0046872 metal ion binding No
GO:0010468 regulation of gene expression No
GO:0043167 ion binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0005488 binding No
GO:0080090 regulation of primary metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0050789 regulation of biological process No
GO:0003700 DNA-binding transcription factor activity No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:2001141 regulation of RNA biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0031326 regulation of cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5348
MPPRRSHRKSRAGCRRCKSRKIKCDEVHPRCGNCVKHGVLCDFENGPVPPRKPIAAGLSPVPSPGLSPDPVSVGS
DRLMELRLLHHFTTSTAKTLFVRPSPADDVWMRAVPLIAFQGRPYLMDAILSVAALHLRTLCPDDSILVRASHAY
SDASLTAYCAAVERGITAANAEALFLTATLIAFRSSASRLFLKDDSEPDTAPNTRYVLPMAWFHAFQSVKSIIST
SWQWIQDSDVVKTVIDSQPNWKQDTNTLHDDSFFAHLLDGLDQELADEPLQHVSATSQGYFYAVSVLTWAHKSAY
APAALAFPAGVSGRFVELIEEKRPRALAILACFYALLKRVDGVWWLSDMARREVAGLSSLFDPASPWRRHLEWPI
RVSVWDGSNVPPDLWGVDCETQPQEERRLVETMWLSMEAPV
Coding >Ophio5|5348
ATGCCGCCGCGGCGCTCGCACAGAAAGTCGCGTGCTGGGTGCCGGAGGTGCAAGAGCAGGAAGATCAAGTGCGAC
GAGGTGCATCCGCGATGCGGAAATTGCGTCAAGCATGGCGTCTTGTGCGACTTTGAGAACGGCCCTGTGCCGCCT
CGCAAACCCATCGCCGCCGGCCTCTCGCCCGTCCCATCGCCTGGCCTCTCGCCCGACCCCGTCTCTGTCGGCTCC
GACCGCCTCATGGAGCTTCGTCTCCTGCACCACTTCACAACCAGCACCGCCAAGACGCTCTTCGTCCGTCCCTCC
CCCGCCGACGATGTCTGGATGCGCGCCGTGCCTCTCATCGCCTTTCAGGGCAGGCCTTACCTGATGGACGCCATC
CTCTCCGTCGCCGCCCTGCATCTTCGCACCCTGTGTCCGGACGACAGCATCCTCGTCCGCGCGTCGCACGCCTAC
TCGGACGCTTCCCTGACCGCCTACTGCGCCGCCGTCGAGCGCGGCATCACCGCCGCCAATGCCGAGGCCCTCTTC
CTCACCGCCACTCTCATCGCCTTCCGCTCCTCCGCCTCCCGCCTCTTCCTGAAAGACGATTCCGAGCCAGATACA
GCTCCCAATACCCGCTACGTCCTGCCCATGGCCTGGTTTCATGCTTTCCAGAGCGTAAAGTCCATCATTTCCACT
TCCTGGCAGTGGATCCAGGACAGCGACGTCGTCAAGACCGTCATCGACTCCCAGCCCAACTGGAAGCAGGATACG
AATACTTTGCACGACGACTCCTTCTTCGCCCACCTACTCGACGGTCTCGACCAGGAGCTTGCCGACGAGCCACTT
CAGCACGTCTCGGCCACCAGTCAGGGCTACTTTTATGCCGTCAGCGTCCTCACATGGGCGCACAAGAGCGCCTAC
GCTCCCGCCGCCTTGGCCTTCCCGGCCGGCGTCTCTGGCCGCTTCGTCGAACTCATCGAGGAGAAGCGCCCGCGC
GCGCTCGCCATCCTCGCCTGCTTCTACGCCCTGCTGAAGCGCGTCGACGGCGTGTGGTGGCTGAGTGACATGGCT
CGCCGAGAGGTAGCCGGGCTCTCCAGCTTGTTCGATCCGGCCTCGCCCTGGCGCCGTCATCTCGAGTGGCCCATC
CGCGTCTCGGTCTGGGACGGGAGCAACGTGCCGCCGGACCTCTGGGGCGTCGACTGTGAGACCCAGCCGCAGGAG
GAAAGACGTCTCGTCGAGACCATGTGGCTGTCGATGGAAGCCCCGGTC
Transcript >Ophio5|5348
ATGCCGCCGCGGCGCTCGCACAGAAAGTCGCGTGCTGGGTGCCGGAGGTGCAAGAGCAGGAAGATCAAGTGCGAC
GAGGTGCATCCGCGATGCGGAAATTGCGTCAAGCATGGCGTCTTGTGCGACTTTGAGAACGGCCCTGTGCCGCCT
CGCAAACCCATCGCCGCCGGCCTCTCGCCCGTCCCATCGCCTGGCCTCTCGCCCGACCCCGTCTCTGTCGGCTCC
GACCGCCTCATGGAGCTTCGTCTCCTGCACCACTTCACAACCAGCACCGCCAAGACGCTCTTCGTCCGTCCCTCC
CCCGCCGACGATGTCTGGATGCGCGCCGTGCCTCTCATCGCCTTTCAGGGCAGGCCTTACCTGATGGACGCCATC
CTCTCCGTCGCCGCCCTGCATCTTCGCACCCTGTGTCCGGACGACAGCATCCTCGTCCGCGCGTCGCACGCCTAC
TCGGACGCTTCCCTGACCGCCTACTGCGCCGCCGTCGAGCGCGGCATCACCGCCGCCAATGCCGAGGCCCTCTTC
CTCACCGCCACTCTCATCGCCTTCCGCTCCTCCGCCTCCCGCCTCTTCCTGAAAGACGATTCCGAGCCAGATACA
GCTCCCAATACCCGCTACGTCCTGCCCATGGCCTGGTTTCATGCTTTCCAGAGCGTAAAGTCCATCATTTCCACT
TCCTGGCAGTGGATCCAGGACAGCGACGTCGTCAAGACCGTCATCGACTCCCAGCCCAACTGGAAGCAGGATACG
AATACTTTGCACGACGACTCCTTCTTCGCCCACCTACTCGACGGTCTCGACCAGGAGCTTGCCGACGAGCCACTT
CAGCACGTCTCGGCCACCAGTCAGGGCTACTTTTATGCCGTCAGCGTCCTCACATGGGCGCACAAGAGCGCCTAC
GCTCCCGCCGCCTTGGCCTTCCCGGCCGGCGTCTCTGGCCGCTTCGTCGAACTCATCGAGGAGAAGCGCCCGCGC
GCGCTCGCCATCCTCGCCTGCTTCTACGCCCTGCTGAAGCGCGTCGACGGCGTGTGGTGGCTGAGTGACATGGCT
CGCCGAGAGGTAGCCGGGCTCTCCAGCTTGTTCGATCCGGCCTCGCCCTGGCGCCGTCATCTCGAGTGGCCCATC
CGCGTCTCGGTCTGGGACGGGAGCAACGTGCCGCCGGACCTCTGGGGCGTCGACTGTGAGACCCAGCCGCAGGAG
GAAAGACGTCTCGTCGAGACCATGTGGCTGTCGATGGAAGCCCCGGTCTGA
Gene >Ophio5|5348
ATGCCGCCGCGGCGCTCGCACAGAAAGTCGCGTGCTGGGTGCCGGAGGTGCAAGAGCAGGAAGATCAAGGTGGGT
GTTCCCCTTCCCAAACACCTTCGACGCGTCTGCCTGCCTACATTACTGACCATCAGAGCTTGTCCCAGTGCGACG
AGGTGCATCCGCGATGCGGAAATTGCGTCAAGCATGGCGTCTTGTGCGACTTTGAGAACGGCCCTGTGCCGCCTC
GCAAACCCATCGCCGCCGGCCTCTCGCCCGTCCCATCGCCTGGCCTCTCGCCCGACCCCGTCTCTGTCGGCTCCG
ACCGCCTCATGGAGCTTCGTCTCCTGCACCACTTCACAACCAGCACCGCCAAGACGCTCTTCGTCCGTCCCTCCC
CCGCCGACGATGTCTGGATGCGCGCCGTGCCTCTCATCGCCTTTCAGGGCAGGCCTTACCTGATGGACGCCATCC
TCTCCGTCGCCGCCCTGCATCTTCGCACCCTGTGTCCGGACGACAGCATCCTCGTCCGCGCGTCGCACGCCTACT
CGGACGCTTCCCTGACCGCCTACTGCGCCGCCGTCGAGCGCGGCATCACCGCCGCCAATGCCGAGGCCCTCTTCC
TCACCGCCACTCTCATCGCCTTCCGCTCCTCCGCCTCCCGCCTCTTCCTGAAAGACGATTCCGAGCCAGATACAG
CTCCCAATACCCGCTACGTCCTGCCCATGGCCTGGTTTCATGCTTTCCAGAGCGTAAAGTCCATCATTTCCACTT
CCTGGCAGTGGATCCAGGACAGCGACGTCGTCAAGACCGTCATCGACTCCCAGCCCAACTGGAAGCAGGATACGA
ATACTTTGCACGACGACTCCTTCTTCGCCCACCTACTCGACGGTCTCGACCAGGAGCTTGCCGACGAGCCACTTC
AGCACGTCTCGGCCACCAGTCAGGGCTACTTTTATGCCGTCAGCGTCCTCACATGGGCGCACAAGAGCGCCTACG
CTCCCGCCGCCTTGGCCTTCCCGGCCGGCGTCTCTGGCCGCTTCGTCGAACTCATCGAGGAGAAGCGCCCGCGCG
CGCTCGCCATCCTCGCCTGCTTCTACGCCCTGCTGAAGCGCGTCGACGGCGTGTGGTGGCTGAGTGACATGGCTC
GCCGAGAGGTAGCCGGGCTCTCCAGCTTGTTCGATCCGGCCTCGCCCTGGCGCCGTCATCTCGAGTGGCCCATCC
GCGTCTCGGTCTGGGACGGGAGCAACGTGCCGCCGGACCTCTGGGGCGTCGACTGTGAGACCCAGCCGCAGGAGG
AAAGACGTCTCGTCGAGACCATGGTGAGCCACATGGAAATGCTGAGCAAGCAGGCCAGCCAGGCCGCTAAGAACG
CGTCAGTGGCTGTCGATGGAAGCCCCGGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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