Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5344
Gene name
Locationscaffold_435:1730..2505
Strand-
Gene length (bp)775
Transcript length (bp)636
Coding sequence length (bp)633
Protein length (aa) 211

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5344
MRASTALIALGAAVASAQSNGVGNYSSELDMHIDPNSIGSQQRAIWCRAQTNTCGLLCDNNTSKNSCVQEKLEYD
CICAANNSAPALQYYQQTIPTFICETLFSQCDKQNVGNAEGQQSCITNIQNLCGKGAPPKVSSGSSSGGDSSGGD
SSDSSDSSSTAASSSSQATATQPGNNNAVTTTRSGGLAAPTKVPAANGVAFAVAVGALALL
Coding >Ophio5|5344
ATGCGTGCCTCTACCGCACTCATCGCCCTCGGCGCTGCCGTTGCCTCGGCCCAGTCCAACGGAGTTGGCAACTAC
TCGAGCGAGCTGGACATGCACATTGATCCCAACTCGATTGGCTCCCAGCAGCGAGCTATCTGGTGTCGCGCTCAG
ACCAACACTTGCGGACTCCTCTGCGATAACAACACCAGCAAGAACAGTTGCGTCCAGGAGAAGCTTGAGTACGAC
TGTATCTGTGCTGCCAACAACTCGGCCCCGGCCCTGCAGTATTACCAGCAGACCATCCCCACGTTCATCTGTGAG
ACACTTTTCAGCCAGTGCGACAAGCAGAACGTCGGCAACGCAGAAGGTCAGCAGTCGTGCATCACCAACATCCAG
AACCTGTGCGGCAAGGGTGCCCCGCCCAAGGTGTCGAGCGGCAGCAGCAGCGGCGGTGACAGCAGCGGCGGTGAC
AGCAGCGACAGCAGCGACAGCTCCAGCACGGCCGCCTCGAGCTCGTCGCAGGCGACTGCGACGCAGCCGGGCAAC
AACAACGCCGTGACGACGACGAGGTCGGGTGGCCTCGCTGCCCCGACCAAGGTTCCGGCTGCCAATGGTGTGGCC
TTTGCCGTTGCCGTGGGCGCTCTCGCTCTTCTC
Transcript >Ophio5|5344
ATGCGTGCCTCTACCGCACTCATCGCCCTCGGCGCTGCCGTTGCCTCGGCCCAGTCCAACGGAGTTGGCAACTAC
TCGAGCGAGCTGGACATGCACATTGATCCCAACTCGATTGGCTCCCAGCAGCGAGCTATCTGGTGTCGCGCTCAG
ACCAACACTTGCGGACTCCTCTGCGATAACAACACCAGCAAGAACAGTTGCGTCCAGGAGAAGCTTGAGTACGAC
TGTATCTGTGCTGCCAACAACTCGGCCCCGGCCCTGCAGTATTACCAGCAGACCATCCCCACGTTCATCTGTGAG
ACACTTTTCAGCCAGTGCGACAAGCAGAACGTCGGCAACGCAGAAGGTCAGCAGTCGTGCATCACCAACATCCAG
AACCTGTGCGGCAAGGGTGCCCCGCCCAAGGTGTCGAGCGGCAGCAGCAGCGGCGGTGACAGCAGCGGCGGTGAC
AGCAGCGACAGCAGCGACAGCTCCAGCACGGCCGCCTCGAGCTCGTCGCAGGCGACTGCGACGCAGCCGGGCAAC
AACAACGCCGTGACGACGACGAGGTCGGGTGGCCTCGCTGCCCCGACCAAGGTTCCGGCTGCCAATGGTGTGGCC
TTTGCCGTTGCCGTGGGCGCTCTCGCTCTTCTCTGA
Gene >Ophio5|5344
ATGCGTGCCTCTACCGCACTCATCGCCCTCGGCGCTGCCGTTGCCTCGGCCCAGTCCAACGGAGTTGGCAACTAC
TCGAGCGAGCTGGACATGCACATTGATCCCAACTCGATTGGCTCCCAGCAGCGAGGTATGTACTTCCCATTCCAG
ACCCTTGTTTGTCATGAGGCTTACGACGCTTTTCACCTAAGCTATCTGGTGTCGCGCTCAGACCAACACTTGCGG
ACTCCTCTGCGATAACAACACCAGCAAGAACAGTTGCGTCCAGGTAGGCTCGCCCCCTCCCGTTTCACAGCGTCG
TGCCGTAGATCATGTCGGCTGACGTTTTCTTTGTTCCTCTCTTTAGGAGAAGCTTGAGTACGACTGTATCTGTGC
TGCCAACAACTCGGCCCCGGCCCTGCAGTATTACCAGCAGACCATCCCCACGTTCATCTGTGAGACACTTTTCAG
CCAGTGCGACAAGCAGAACGTCGGCAACGCAGAAGGTCAGCAGTCGTGCATCACCAACATCCAGAACCTGTGCGG
CAAGGGTGCCCCGCCCAAGGTGTCGAGCGGCAGCAGCAGCGGCGGTGACAGCAGCGGCGGTGACAGCAGCGACAG
CAGCGACAGCTCCAGCACGGCCGCCTCGAGCTCGTCGCAGGCGACTGCGACGCAGCCGGGCAACAACAACGCCGT
GACGACGACGAGGTCGGGTGGCCTCGCTGCCCCGACCAAGGTTCCGGCTGCCAATGGTGTGGCCTTTGCCGTTGC
CGTGGGCGCTCTCGCTCTTCTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail