© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophio5|5332 |
| Gene name | |
| Location | scaffold_433:7239..9829 |
| Strand | + |
| Gene length (bp) | 2590 |
| Transcript length (bp) | 2397 |
| Coding sequence length (bp) | 2394 |
| Protein length (aa) | 798 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03169 | OPT | OPT oligopeptide transporter protein | 1.2E-180 | 99 | 754 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 39 | 795 | 0.0E+00 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 78 | 793 | 0.0E+00 |
| sp|P40897|OPT1_YEAST | Oligopeptide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT1 PE=1 SV=1 | 37 | 793 | 1.0E-171 |
| sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 44 | 767 | 2.0E-166 |
| sp|O04514|OPT2_ARATH | Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 | 70 | 770 | 3.0E-163 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 39 | 795 | 0.0E+00 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 78 | 793 | 0.0E+00 |
| sp|P40897|OPT1_YEAST | Oligopeptide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT1 PE=1 SV=1 | 37 | 793 | 1.0E-171 |
| sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 44 | 767 | 2.0E-166 |
| sp|O04514|OPT2_ARATH | Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 | 70 | 770 | 3.0E-163 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 78 | 777 | 7.0E-163 |
| sp|Q9FME8|OPT4_ARATH | Oligopeptide transporter 4 OS=Arabidopsis thaliana GN=OPT4 PE=1 SV=1 | 77 | 770 | 8.0E-160 |
| sp|O82485|OPT7_ARATH | Oligopeptide transporter 7 OS=Arabidopsis thaliana GN=OPT7 PE=2 SV=1 | 35 | 768 | 2.0E-158 |
| sp|Q9T095|OPT6_ARATH | Oligopeptide transporter 6 OS=Arabidopsis thaliana GN=OPT6 PE=2 SV=1 | 77 | 770 | 8.0E-152 |
| sp|O23482|OPT3_ARATH | Oligopeptide transporter 3 OS=Arabidopsis thaliana GN=OPT3 PE=2 SV=3 | 56 | 768 | 3.0E-150 |
| sp|Q9FJD1|OPT8_ARATH | Oligopeptide transporter 8 OS=Arabidopsis thaliana GN=OPT8 PE=2 SV=1 | 72 | 770 | 8.0E-147 |
| sp|Q9FJD2|OPT9_ARATH | Oligopeptide transporter 9 OS=Arabidopsis thaliana GN=OPT9 PE=2 SV=1 | 64 | 784 | 1.0E-140 |
| sp|Q7LL00|YQJC_SCHPO | Uncharacterized oligopeptide transporter C1840.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1840.12 PE=3 SV=2 | 7 | 768 | 4.0E-129 |
| sp|Q06593|OPT2_YEAST | Oligopeptide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT2 PE=1 SV=1 | 12 | 769 | 9.0E-120 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
| GO:0022857 | transmembrane transporter activity | No |
| GO:1904680 | peptide transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0042887 | amide transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 101 | 123 | 22 |
| 2 | 175 | 197 | 22 |
| 3 | 207 | 229 | 22 |
| 4 | 234 | 256 | 22 |
| 5 | 271 | 290 | 19 |
| 6 | 297 | 314 | 17 |
| 7 | 329 | 351 | 22 |
| 8 | 358 | 380 | 22 |
| 9 | 424 | 446 | 22 |
| 10 | 478 | 500 | 22 |
| 11 | 505 | 527 | 22 |
| 12 | 534 | 556 | 22 |
| 13 | 588 | 610 | 22 |
| 14 | 630 | 649 | 19 |
| 15 | 659 | 676 | 17 |
| 16 | 683 | 700 | 17 |
| 17 | 704 | 721 | 17 |
| 18 | 734 | 756 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5332 MVPSVFRKRHEPEDVTPIPAALESNASGVDHLKHLHEFEKAHKLDPNLPIDDLNDVDAAIAMGNAEKGIEIEHAL MEDNSPYPEVRAVVRNYDVDVPVNTIRAWVIGLLLCSVGSSINMIFSLRYPNVTITTYVVQLIAYPIGRGWDMIM PDRVWNFCGLKFNLRPGKFNYKEHVIIVAMSNAAYGGGALYANDVIIAQKIFYGQDFGMAFQILFGITTLCTGYG LAGLARRFLVWPAAMIWPADLVNCALFYTLHDHSTSDPTKTNGWSIGRYKLFLIIFCGGFFYYWFPGWIFKGLSL FAWVCWMAPNNLVLNKLFGVQHGYGLMPITFDWSIISGFIGSPLIPPFHAIANVIGGITVFFVIASIGIHFTGAL YADYVPVQSSESYDNTGSIYNVSRVLDANFQFNETAYKEYSPLYLSTQFAMAYGLSFAAMASVIIHVALYHGKEI WRQFRMARHQEDDVHMRLMKKYRDAEDWWYAALFIVMVAISFGVVTGWPTGFPPWAFVICLLLPIVWLIPIGLIQ AITNIQLGLNVLTEFIIGYMAPGRPLVMMLFKNYGYISMSQALYFAQDLKLGHYMKVPPRVMFSSQLVASIWSAT LQICVLNWALRNIPEVCSTTQPNNYVCPNSRVFYTASVVWGVIGPARIFSQGATYASLRWFWLVGAVTPVATWLL ARRWPKSFWRYVCTPIIFGGVGLLPPATVYIYLCWGVVGIIFGYFIKRRYTGWWLQYNYITSAALDCGLICSTLI IFFTLYLTSTNPPKWWGNVGIFKNLDYTNQAVTKKLAPGETFGPSVFP |
| Coding | >Ophio5|5332 ATGGTGCCCTCCGTCTTTCGCAAGCGCCACGAGCCCGAGGACGTGACGCCCATCCCGGCCGCTCTCGAGTCCAAC GCCTCGGGCGTCGACCATCTGAAGCACCTTCACGAGTTTGAGAAGGCTCATAAGCTTGACCCCAACCTACCCATC GACGACCTCAACGATGTCGACGCCGCTATCGCCATGGGCAATGCTGAGAAGGGCATCGAGATTGAGCACGCTCTC ATGGAGGACAACAGCCCCTATCCGGAGGTCCGCGCCGTCGTCCGCAACTACGACGTCGACGTGCCCGTAAACACC ATCCGCGCCTGGGTCATCGGCTTGCTGCTGTGCTCCGTCGGTTCCAGCATCAACATGATCTTCTCGCTGCGCTAT CCAAACGTCACCATCACCACGTACGTTGTTCAGCTCATCGCCTATCCAATCGGCCGCGGCTGGGACATGATTATG CCGGACCGCGTCTGGAATTTCTGCGGCCTCAAGTTCAACCTACGTCCCGGCAAGTTCAACTATAAGGAGCACGTC ATCATCGTCGCCATGTCCAACGCCGCGTACGGCGGAGGTGCTCTCTACGCCAACGACGTCATCATCGCTCAAAAG ATCTTTTACGGTCAGGATTTTGGCATGGCCTTTCAGATCCTCTTCGGCATCACCACCCTTTGCACCGGCTACGGA CTCGCCGGCCTTGCCCGCCGCTTCTTGGTCTGGCCGGCCGCCATGATCTGGCCGGCCGATCTCGTCAACTGTGCT CTCTTCTATACCCTGCACGACCACTCAACGTCAGACCCTACCAAGACCAACGGCTGGTCCATCGGGCGCTACAAG CTGTTTCTCATCATCTTCTGCGGGGGCTTCTTCTACTACTGGTTCCCCGGCTGGATCTTCAAGGGCCTTTCCCTC TTCGCCTGGGTCTGCTGGATGGCCCCGAACAACCTGGTCCTGAACAAGCTGTTCGGCGTCCAGCACGGTTACGGC TTGATGCCCATCACCTTTGACTGGTCCATCATCAGCGGCTTCATCGGCTCGCCCCTCATTCCGCCCTTTCACGCC ATCGCCAACGTTATCGGAGGCATCACGGTCTTTTTCGTCATAGCCTCCATTGGCATCCACTTCACCGGCGCCCTT TACGCCGACTACGTGCCCGTTCAGTCCTCCGAGTCGTACGACAACACGGGCAGCATCTACAACGTCAGTCGCGTT CTCGATGCCAACTTTCAGTTCAACGAGACGGCTTATAAAGAGTACTCGCCCCTGTACCTGTCCACCCAGTTCGCC ATGGCGTACGGCCTCTCCTTTGCCGCCATGGCGTCCGTCATCATTCATGTCGCCCTTTACCATGGAAAGGAGATT TGGAGGCAGTTTAGGATGGCCCGTCATCAGGAGGACGACGTCCATATGCGCCTGATGAAGAAGTACCGTGACGCC GAGGACTGGTGGTATGCCGCTCTGTTCATCGTCATGGTGGCCATTTCGTTCGGTGTCGTGACGGGCTGGCCGACG GGCTTCCCTCCCTGGGCCTTTGTCATCTGTCTACTCCTCCCTATTGTCTGGCTCATCCCCATCGGTCTCATCCAG GCCATCACCAACATCCAGCTCGGCCTCAACGTTCTGACCGAATTCATCATCGGTTACATGGCGCCGGGACGGCCG CTGGTCATGATGCTCTTCAAAAACTACGGCTACATCTCCATGTCGCAGGCCCTCTACTTTGCTCAAGATCTCAAG CTCGGACACTATATGAAGGTGCCTCCCCGCGTTATGTTCTCGTCGCAGCTGGTGGCCTCGATCTGGTCGGCCACT CTGCAGATTTGCGTCCTCAACTGGGCGCTTCGCAACATCCCCGAAGTCTGCAGCACCACGCAGCCAAACAACTAC GTCTGCCCCAACAGTCGCGTTTTCTACACGGCGTCGGTTGTATGGGGCGTCATTGGTCCCGCCCGCATCTTCAGC CAAGGGGCAACGTACGCCTCGCTGCGCTGGTTCTGGCTCGTCGGCGCCGTCACGCCTGTCGCGACCTGGCTGCTG GCGCGTCGGTGGCCCAAGTCCTTCTGGCGCTACGTCTGCACGCCCATCATCTTCGGCGGCGTCGGCCTCCTCCCG CCGGCTACCGTCTACATCTACCTCTGCTGGGGCGTCGTCGGCATCATCTTTGGCTACTTCATCAAGCGTCGCTAC ACTGGCTGGTGGTTGCAGTACAACTACATCACCTCGGCTGCCCTCGACTGCGGTCTCATCTGTTCGACTTTGATC ATCTTTTTCACCCTGTACCTGACGTCGACGAACCCGCCGAAGTGGTGGGGCAACGTTGGCATCTTCAAGAATCTC GACTACACCAACCAGGCCGTCACCAAGAAGTTGGCGCCCGGAGAGACGTTTGGGCCGTCCGTCTTCCCC |
| Transcript | >Ophio5|5332 ATGGTGCCCTCCGTCTTTCGCAAGCGCCACGAGCCCGAGGACGTGACGCCCATCCCGGCCGCTCTCGAGTCCAAC GCCTCGGGCGTCGACCATCTGAAGCACCTTCACGAGTTTGAGAAGGCTCATAAGCTTGACCCCAACCTACCCATC GACGACCTCAACGATGTCGACGCCGCTATCGCCATGGGCAATGCTGAGAAGGGCATCGAGATTGAGCACGCTCTC ATGGAGGACAACAGCCCCTATCCGGAGGTCCGCGCCGTCGTCCGCAACTACGACGTCGACGTGCCCGTAAACACC ATCCGCGCCTGGGTCATCGGCTTGCTGCTGTGCTCCGTCGGTTCCAGCATCAACATGATCTTCTCGCTGCGCTAT CCAAACGTCACCATCACCACGTACGTTGTTCAGCTCATCGCCTATCCAATCGGCCGCGGCTGGGACATGATTATG CCGGACCGCGTCTGGAATTTCTGCGGCCTCAAGTTCAACCTACGTCCCGGCAAGTTCAACTATAAGGAGCACGTC ATCATCGTCGCCATGTCCAACGCCGCGTACGGCGGAGGTGCTCTCTACGCCAACGACGTCATCATCGCTCAAAAG ATCTTTTACGGTCAGGATTTTGGCATGGCCTTTCAGATCCTCTTCGGCATCACCACCCTTTGCACCGGCTACGGA CTCGCCGGCCTTGCCCGCCGCTTCTTGGTCTGGCCGGCCGCCATGATCTGGCCGGCCGATCTCGTCAACTGTGCT CTCTTCTATACCCTGCACGACCACTCAACGTCAGACCCTACCAAGACCAACGGCTGGTCCATCGGGCGCTACAAG CTGTTTCTCATCATCTTCTGCGGGGGCTTCTTCTACTACTGGTTCCCCGGCTGGATCTTCAAGGGCCTTTCCCTC TTCGCCTGGGTCTGCTGGATGGCCCCGAACAACCTGGTCCTGAACAAGCTGTTCGGCGTCCAGCACGGTTACGGC TTGATGCCCATCACCTTTGACTGGTCCATCATCAGCGGCTTCATCGGCTCGCCCCTCATTCCGCCCTTTCACGCC ATCGCCAACGTTATCGGAGGCATCACGGTCTTTTTCGTCATAGCCTCCATTGGCATCCACTTCACCGGCGCCCTT TACGCCGACTACGTGCCCGTTCAGTCCTCCGAGTCGTACGACAACACGGGCAGCATCTACAACGTCAGTCGCGTT CTCGATGCCAACTTTCAGTTCAACGAGACGGCTTATAAAGAGTACTCGCCCCTGTACCTGTCCACCCAGTTCGCC ATGGCGTACGGCCTCTCCTTTGCCGCCATGGCGTCCGTCATCATTCATGTCGCCCTTTACCATGGAAAGGAGATT TGGAGGCAGTTTAGGATGGCCCGTCATCAGGAGGACGACGTCCATATGCGCCTGATGAAGAAGTACCGTGACGCC GAGGACTGGTGGTATGCCGCTCTGTTCATCGTCATGGTGGCCATTTCGTTCGGTGTCGTGACGGGCTGGCCGACG GGCTTCCCTCCCTGGGCCTTTGTCATCTGTCTACTCCTCCCTATTGTCTGGCTCATCCCCATCGGTCTCATCCAG GCCATCACCAACATCCAGCTCGGCCTCAACGTTCTGACCGAATTCATCATCGGTTACATGGCGCCGGGACGGCCG CTGGTCATGATGCTCTTCAAAAACTACGGCTACATCTCCATGTCGCAGGCCCTCTACTTTGCTCAAGATCTCAAG CTCGGACACTATATGAAGGTGCCTCCCCGCGTTATGTTCTCGTCGCAGCTGGTGGCCTCGATCTGGTCGGCCACT CTGCAGATTTGCGTCCTCAACTGGGCGCTTCGCAACATCCCCGAAGTCTGCAGCACCACGCAGCCAAACAACTAC GTCTGCCCCAACAGTCGCGTTTTCTACACGGCGTCGGTTGTATGGGGCGTCATTGGTCCCGCCCGCATCTTCAGC CAAGGGGCAACGTACGCCTCGCTGCGCTGGTTCTGGCTCGTCGGCGCCGTCACGCCTGTCGCGACCTGGCTGCTG GCGCGTCGGTGGCCCAAGTCCTTCTGGCGCTACGTCTGCACGCCCATCATCTTCGGCGGCGTCGGCCTCCTCCCG CCGGCTACCGTCTACATCTACCTCTGCTGGGGCGTCGTCGGCATCATCTTTGGCTACTTCATCAAGCGTCGCTAC ACTGGCTGGTGGTTGCAGTACAACTACATCACCTCGGCTGCCCTCGACTGCGGTCTCATCTGTTCGACTTTGATC ATCTTTTTCACCCTGTACCTGACGTCGACGAACCCGCCGAAGTGGTGGGGCAACGTTGGCATCTTCAAGAATCTC GACTACACCAACCAGGCCGTCACCAAGAAGTTGGCGCCCGGAGAGACGTTTGGGCCGTCCGTCTTCCCCTGA |
| Gene | >Ophio5|5332 ATGGTGCCCTCCGTCTTTCGCAAGCGCCACGAGCCCGAGGACGTGACGCCCATCCCGGCCGCTCTCGAGTCCAAC GCCTCGGGCGTCGACCATCTGAAGCACCTTCACGAGTTTGAGAAGGCTCATAAGCTTGACCCCAACCTACCCATC GACGACCTCAACGATGTCGACGCCGCTATCGCCATGGGCAATGCTGAGAAGGGCATCGAGATTGAGCACGCTCTC ATGGAGGACAACAGCCCCTATCCGGAGGTGAAGGAAAACCTCTTTTCTCTCGAGAGAGGCCGCTACTGACCTCGA CTGAAAGGTCCGCGCCGTCGTCCGCAACTACGACGTCGACGTGCCCGTAAACACCATCCGCGCCTGGGTCATCGG CTTGCTGCTGTGCTCCGTCGGTTCCAGCATCAACATGATCTTCTCGCTGCGCTATCCAAACGTCACCATCACCAC GTACGTTGTTCAGCTCATCGCCTATCCAATCGGCCGCGGCTGGGACATGATTATGCCGGACCGCGTCTGGAATTT CTGCGGCCTCAAGTTCAACCTACGTCCCGGCAAGTTCAACTATAAGGAGCACGTCATCATCGTCGCCATGTCCAA CGTGAAGATTCCCTTCCTTTCCCTTGCCCCCCCCCCTTGAAAAATCGGAGCGCCCTTGCTGATGTCGTGACAAGG CCGCGTACGGCGGAGGTGCTCTCTACGCCAACGACGTCATCATCGCTCAAAAGATCTTTTACGGTCAGGATTTTG GCATGGCCTTTCAGATCCTCTTCGGCATCACCACCCTTTGCACCGGCTACGGACTCGCCGGCCTTGCCCGCCGCT TCTTGGTCTGGCCGGCCGCCATGATCTGGCCGGCCGATCTCGTCAACTGTGCTCTCTTCTATACCCTGCACGACC ACTCAACGTCAGACCCTACCAAGACCAACGGCTGGTCCATCGGGCGCTACAAGCTGTTTCTCATCATCTTCTGCG GGGGCTTCTTCTACTACTGGTTCCCCGGCTGGATCTTCAAGGGCCTTTCCCTCTTCGCCTGGGTCTGCTGGATGG CCCCGAACAACCTGGTCCTGAACAAGCTGTTCGGCGTCCAGCACGGTTACGGCTTGATGCCCATCACCTTTGACT GGTCCATCATCAGCGGCTTCATCGGCTCGCCCCTCATTCCGCCCTTTCACGCCATCGCCAACGTTATCGGAGGCA TCACGGTCTTTTTCGTCATAGCCTCCATTGGCATCCACTTCACCGGCGCCCTTTACGCCGACTACGTGCCCGTTC AGTCCTCCGAGTCGTACGACAACACGGGCAGCATCTACAACGTCAGTCGCGTTCTCGATGCCAACTTTCAGTTCA ACGAGACGGCTTATAAAGAGTACTCGCCCCTGTACCTGTCCACCCAGTTCGCCATGGCGTACGGCCTCTCCTTTG CCGCCATGGCGTCCGTCATCATTCATGTCGCCCTTTACCATGGAAAGGAGATTTGGAGGCAGTTTAGGATGGCCC GTCATCAGGAGGACGACGTCCATATGCGCCTGATGAAGAAGTACCGTGACGCCGAGGACTGGTGGTATGCCGGTA TGTGTGACCTTCTGCTCTTGGAGCCGCCGCTCCTTTATCCGCCGTGCTGACCTTGGGCCCAGCTCTGTTCATCGT CATGGTGGCCATTTCGTTCGGTGTCGTGACGGGCTGGCCGACGGGCTTCCCTCCCTGGGCCTTTGTCATCTGTCT ACTCCTCCCTATTGTCTGGCTCATCCCCATCGGTCTCATCCAGGCCATCACCAACATCCAGCTCGGCCTCAACGT TCTGACCGAATTCATCATCGGTTACATGGCGCCGGGACGGCCGCTGGTCATGATGCTCTTCAAAAACTACGGCTA CATCTCCATGTCGCAGGCCCTCTACTTTGCTCAAGATCTCAAGCTCGGACACTATATGAAGGTGCCTCCCCGCGT TATGTTCTCGTCGCAGCTGGTGGCCTCGATCTGGTCGGCCACTCTGCAGATTTGCGTCCTCAACTGGGCGCTTCG CAACATCCCCGAAGTCTGCAGCACCACGCAGCCAAACAACTACGTCTGCCCCAACAGTCGCGTTTTCTACACGGC GTCGGTTGTATGGGGCGTCATTGGTCCCGCCCGCATCTTCAGCCAAGGGGCAACGTACGCCTCGCTGCGCTGGTT CTGGCTCGTCGGCGCCGTCACGCCTGTCGCGACCTGGCTGCTGGCGCGTCGGTGGCCCAAGTCCTTCTGGCGCTA CGTCTGCACGCCCATCATCTTCGGCGGCGTCGGCCTCCTCCCGCCGGCTACCGTCTACATCTACCTCTGCTGGGG CGTCGTCGGCATCATCTTTGGCTACTTCATCAAGCGTCGCTACACTGGCTGGTGGTTGCAGTACAACTACATCAC CTCGGCTGCCCTCGACTGCGGTCTCATCTGTTCGACTTTGATCATCTTTTTCACCCTGTACCTGACGTCGACGAA CCCGCCGAAGTGGTGGGGCAACGTTGGCATCTTCAAGAATCTCGACTACACCAACCAGGCCGTCACCAAGAAGTT GGCGCCCGGAGAGACGTTTGGGCCGTCCGTCTTCCCCTGA |