© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5326 |
| Gene name | |
| Location | scaffold_432:8726..9835 |
| Strand | - |
| Gene length (bp) | 1109 |
| Transcript length (bp) | 1002 |
| Coding sequence length (bp) | 999 |
| Protein length (aa) | 333 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00397 | WW | WW domain | 1.4E-08 | 141 | 169 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14097|YERE_SCHPO | WW domain-containing protein C2F3.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2F3.14c PE=1 SV=1 | 247 | 329 | 1.0E-15 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 42 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5326 MPGEIVVPHSAGGTSTTSISSQNLFFPGSRSPNTRRRTPPCPVQEFASCLGPTPNGFLPPMSSPPGTHASGSATP SVAEASDVKDVAPATEAVLPCPDPTEHLKVTAESEQAEKQSAAVPEETSDDGPPLPDEPVPQDKDDGWDCLWEPT HQKWYFVNRFTGVSQWENPRVPDAAVSSSAEAQPAASLNEKPAAGGYNPAIHGDYDPNAWYAQAYNQEQEQQQQM QDAAAAAAAAAAAAFGDPAGAYGTTVGFNRFTGQFQAPGAGPQRHSDEAKARRQMNAFFDVDAAANAHDGRSLKA ERQNQKLSKSELKAYKEKRRAKKEEKRRAWLMD |
| Coding | >Ophio5|5326 ATGCCCGGGGAAATTGTAGTTCCGCATTCCGCGGGCGGCACTTCAACCACCTCCATATCCTCGCAGAACCTCTTC TTTCCAGGATCTCGCTCGCCCAACACACGCCGACGAACGCCGCCTTGTCCAGTCCAGGAGTTTGCCAGCTGCCTT GGCCCGACCCCCAACGGATTCTTGCCACCAATGTCCTCGCCGCCAGGAACCCACGCGTCCGGTTCGGCGACGCCG TCCGTCGCCGAGGCGTCGGACGTGAAAGATGTCGCGCCTGCGACCGAGGCAGTCCTCCCGTGTCCGGACCCGACA GAGCATCTCAAGGTTACGGCTGAAAGCGAGCAGGCCGAGAAACAGTCTGCGGCCGTCCCTGAGGAGACATCGGAC GATGGACCTCCCTTACCTGATGAGCCGGTGCCACAGGACAAAGACGACGGTTGGGACTGCTTGTGGGAGCCGACG CATCAGAAATGGTATTTTGTCAATCGCTTCACTGGCGTGAGCCAGTGGGAGAATCCTCGCGTCCCCGACGCCGCT GTCTCCTCCTCCGCAGAAGCGCAGCCCGCTGCATCCTTGAACGAGAAGCCAGCTGCGGGAGGCTATAACCCGGCT ATTCATGGCGACTACGACCCTAACGCGTGGTACGCTCAGGCCTACAATCAGGAACAAGAACAGCAGCAGCAGATG CAAGATGCGGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTTTCGGTGACCCCGCTGGCGCATACGGCACTACA GTCGGCTTCAATCGCTTCACCGGGCAGTTTCAAGCCCCCGGCGCCGGCCCGCAACGCCACAGCGATGAGGCCAAG GCCAGACGCCAGATGAATGCCTTTTTCGACGTCGATGCCGCCGCCAACGCGCACGATGGCCGCAGCCTCAAAGCG GAGCGTCAGAATCAGAAGCTCAGTAAGTCCGAACTCAAGGCTTACAAAGAGAAGCGACGCGCCAAAAAGGAAGAG AAACGTAGAGCTTGGCTTATGGAT |
| Transcript | >Ophio5|5326 ATGCCCGGGGAAATTGTAGTTCCGCATTCCGCGGGCGGCACTTCAACCACCTCCATATCCTCGCAGAACCTCTTC TTTCCAGGATCTCGCTCGCCCAACACACGCCGACGAACGCCGCCTTGTCCAGTCCAGGAGTTTGCCAGCTGCCTT GGCCCGACCCCCAACGGATTCTTGCCACCAATGTCCTCGCCGCCAGGAACCCACGCGTCCGGTTCGGCGACGCCG TCCGTCGCCGAGGCGTCGGACGTGAAAGATGTCGCGCCTGCGACCGAGGCAGTCCTCCCGTGTCCGGACCCGACA GAGCATCTCAAGGTTACGGCTGAAAGCGAGCAGGCCGAGAAACAGTCTGCGGCCGTCCCTGAGGAGACATCGGAC GATGGACCTCCCTTACCTGATGAGCCGGTGCCACAGGACAAAGACGACGGTTGGGACTGCTTGTGGGAGCCGACG CATCAGAAATGGTATTTTGTCAATCGCTTCACTGGCGTGAGCCAGTGGGAGAATCCTCGCGTCCCCGACGCCGCT GTCTCCTCCTCCGCAGAAGCGCAGCCCGCTGCATCCTTGAACGAGAAGCCAGCTGCGGGAGGCTATAACCCGGCT ATTCATGGCGACTACGACCCTAACGCGTGGTACGCTCAGGCCTACAATCAGGAACAAGAACAGCAGCAGCAGATG CAAGATGCGGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTTTCGGTGACCCCGCTGGCGCATACGGCACTACA GTCGGCTTCAATCGCTTCACCGGGCAGTTTCAAGCCCCCGGCGCCGGCCCGCAACGCCACAGCGATGAGGCCAAG GCCAGACGCCAGATGAATGCCTTTTTCGACGTCGATGCCGCCGCCAACGCGCACGATGGCCGCAGCCTCAAAGCG GAGCGTCAGAATCAGAAGCTCAGTAAGTCCGAACTCAAGGCTTACAAAGAGAAGCGACGCGCCAAAAAGGAAGAG AAACGTAGAGCTTGGCTTATGGATTGA |
| Gene | >Ophio5|5326 ATGCCCGGGGAAATTGTAGTTCCGCATTCCGCGGGCGGCACTTCAACCACCTCCATATCCTCGCAGAACCTCTTC TTTCCGTAAGCCTGCTTCACCTTGGGACAACAGCGCTCAGACAGAGGATCTCGCTCGCCCAACACACGCCGACGA ACGCCGCCTTGTCCAGTCCAGGTGCCTACATTGAGTATTTGATTGAAAATGGCCCCGTTTCTACGATGCTCATAC TTTTACGCCGACAGGAGTTTGCCAGCTGCCTTGGCCCGACCCCCAACGGATTCTTGCCACCAATGTCCTCGCCGC CAGGAACCCACGCGTCCGGTTCGGCGACGCCGTCCGTCGCCGAGGCGTCGGACGTGAAAGATGTCGCGCCTGCGA CCGAGGCAGTCCTCCCGTGTCCGGACCCGACAGAGCATCTCAAGGTTACGGCTGAAAGCGAGCAGGCCGAGAAAC AGTCTGCGGCCGTCCCTGAGGAGACATCGGACGATGGACCTCCCTTACCTGATGAGCCGGTGCCACAGGACAAAG ACGACGGTTGGGACTGCTTGTGGGAGCCGACGCATCAGAAATGGTATTTTGTCAATCGCTTCACTGGCGTGAGCC AGTGGGAGAATCCTCGCGTCCCCGACGCCGCTGTCTCCTCCTCCGCAGAAGCGCAGCCCGCTGCATCCTTGAACG AGAAGCCAGCTGCGGGAGGCTATAACCCGGCTATTCATGGCGACTACGACCCTAACGCGTGGTACGCTCAGGCCT ACAATCAGGAACAAGAACAGCAGCAGCAGATGCAAGATGCGGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTT TCGGTGACCCCGCTGGCGCATACGGCACTACAGTCGGCTTCAATCGCTTCACCGGGCAGTTTCAAGCCCCCGGCG CCGGCCCGCAACGCCACAGCGATGAGGCCAAGGCCAGACGCCAGATGAATGCCTTTTTCGACGTCGATGCCGCCG CCAACGCGCACGATGGCCGCAGCCTCAAAGCGGAGCGTCAGAATCAGAAGCTCAGTAAGTCCGAACTCAAGGCTT ACAAAGAGAAGCGACGCGCCAAAAAGGAAGAGAAACGTAGAGCTTGGCTTATGGATTGA |