© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5306 |
| Gene name | |
| Location | scaffold_43:53140..56122 |
| Strand | + |
| Gene length (bp) | 2982 |
| Transcript length (bp) | 2553 |
| Coding sequence length (bp) | 2550 |
| Protein length (aa) | 850 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00515 | TPR_1 | Tetratricopeptide repeat | 7.9E-07 | 290 | 322 |
| PF00515 | TPR_1 | Tetratricopeptide repeat | 6.4E-08 | 326 | 355 |
| PF07719 | TPR_2 | Tetratricopeptide repeat | 1.3E-05 | 219 | 251 |
| PF07719 | TPR_2 | Tetratricopeptide repeat | 2.2E-05 | 290 | 320 |
| PF07719 | TPR_2 | Tetratricopeptide repeat | 2.0E-05 | 326 | 355 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 3.6E-05 | 219 | 251 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 6.5E-04 | 290 | 322 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 2.8E-02 | 326 | 355 |
| PF14559 | TPR_19 | Tetratricopeptide repeat | 2.0E-05 | 273 | 325 |
| PF13414 | TPR_11 | TPR repeat | 1.7E-06 | 297 | 336 |
| PF13432 | TPR_16 | Tetratricopeptide repeat | 1.9E-03 | 223 | 283 |
| PF13432 | TPR_16 | Tetratricopeptide repeat | 2.6E-03 | 274 | 321 |
| PF13432 | TPR_16 | Tetratricopeptide repeat | 1.5E-06 | 332 | 393 |
| PF13174 | TPR_6 | Tetratricopeptide repeat | 5.0E-03 | 222 | 250 |
| PF13174 | TPR_6 | Tetratricopeptide repeat | 6.3E-02 | 292 | 317 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 1.2E-02 | 292 | 321 |
| PF12895 | ANAPC3 | Anaphase-promoting complex, cyclosome, subunit 3 | 8.6E-08 | 273 | 349 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O60184|CYC8_SCHPO | General transcriptional corepressor ssn6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ssn6 PE=1 SV=1 | 35 | 421 | 0.0E+00 |
| sp|O77033|CYC8_DICDI | General transcriptional corepressor trfA OS=Dictyostelium discoideum GN=trfA PE=2 SV=1 | 34 | 404 | 2.0E-168 |
| sp|P14922|CYC8_YEAST | General transcriptional corepressor CYC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CYC8 PE=1 SV=2 | 42 | 423 | 1.0E-145 |
| sp|Q6B4Z3|UTY_PANTR | Histone demethylase UTY OS=Pan troglodytes GN=UTY PE=2 SV=1 | 85 | 411 | 2.0E-57 |
| sp|O14607|UTY_HUMAN | Histone demethylase UTY OS=Homo sapiens GN=UTY PE=1 SV=2 | 85 | 411 | 1.0E-56 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O60184|CYC8_SCHPO | General transcriptional corepressor ssn6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ssn6 PE=1 SV=1 | 35 | 421 | 0.0E+00 |
| sp|O77033|CYC8_DICDI | General transcriptional corepressor trfA OS=Dictyostelium discoideum GN=trfA PE=2 SV=1 | 34 | 404 | 2.0E-168 |
| sp|P14922|CYC8_YEAST | General transcriptional corepressor CYC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CYC8 PE=1 SV=2 | 42 | 423 | 1.0E-145 |
| sp|Q6B4Z3|UTY_PANTR | Histone demethylase UTY OS=Pan troglodytes GN=UTY PE=2 SV=1 | 85 | 411 | 2.0E-57 |
| sp|O14607|UTY_HUMAN | Histone demethylase UTY OS=Homo sapiens GN=UTY PE=1 SV=2 | 85 | 411 | 1.0E-56 |
| sp|O15550|KDM6A_HUMAN | Lysine-specific demethylase 6A OS=Homo sapiens GN=KDM6A PE=1 SV=2 | 85 | 408 | 9.0E-56 |
| sp|O70546|KDM6A_MOUSE | Lysine-specific demethylase 6A OS=Mus musculus GN=Kdm6a PE=1 SV=2 | 87 | 408 | 2.0E-55 |
| sp|P79457|UTY_MOUSE | Histone demethylase UTY OS=Mus musculus GN=Uty PE=1 SV=2 | 85 | 408 | 7.0E-55 |
| sp|Q8CGY8|OGT1_MOUSE | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Mus musculus GN=Ogt PE=1 SV=2 | 6 | 391 | 2.0E-16 |
| sp|P81436|OGT1_RABIT | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Oryctolagus cuniculus GN=OGT PE=1 SV=2 | 6 | 391 | 2.0E-16 |
| sp|O15294|OGT1_HUMAN | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3 | 6 | 391 | 3.0E-16 |
| sp|Q27HV0|OGT1_PIG | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Sus scrofa GN=OGT PE=2 SV=1 | 6 | 391 | 3.0E-16 |
| sp|P56558|OGT1_RAT | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Rattus norvegicus GN=Ogt PE=1 SV=1 | 39 | 391 | 2.0E-15 |
| sp|Q96301|SPY_ARATH | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Arabidopsis thaliana GN=SPY PE=1 SV=1 | 59 | 390 | 1.0E-14 |
| sp|O82422|SPY_HORVU | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Hordeum vulgare GN=SPY PE=2 SV=1 | 55 | 390 | 2.0E-14 |
| sp|O82039|SPY_PETHY | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Petunia hybrida GN=SPY PE=2 SV=1 | 48 | 390 | 1.0E-13 |
| sp|Q8RVB2|SPY_SOLLC | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Solanum lycopersicum GN=SPY PE=2 SV=1 | 59 | 390 | 2.0E-13 |
| sp|Q6YZI0|SPY_ORYSJ | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Oryza sativa subsp. japonica GN=SPY PE=3 SV=1 | 55 | 390 | 3.0E-13 |
| sp|Q6YZI0|SPY_ORYSJ | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Oryza sativa subsp. japonica GN=SPY PE=3 SV=1 | 16 | 355 | 4.0E-12 |
| sp|Q8RVB2|SPY_SOLLC | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Solanum lycopersicum GN=SPY PE=2 SV=1 | 58 | 355 | 8.0E-12 |
| sp|Q6YZI0|SPY_ORYSJ | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Oryza sativa subsp. japonica GN=SPY PE=3 SV=1 | 58 | 368 | 3.0E-11 |
| sp|O82422|SPY_HORVU | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Hordeum vulgare GN=SPY PE=2 SV=1 | 83 | 368 | 3.0E-11 |
| sp|Q9M8Y0|SEC_ARATH | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC OS=Arabidopsis thaliana GN=SEC PE=2 SV=1 | 44 | 390 | 7.0E-11 |
| sp|Q96301|SPY_ARATH | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Arabidopsis thaliana GN=SPY PE=1 SV=1 | 27 | 390 | 1.0E-10 |
| sp|Q8CGY8|OGT1_MOUSE | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Mus musculus GN=Ogt PE=1 SV=2 | 46 | 393 | 2.0E-10 |
| sp|Q27HV0|OGT1_PIG | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Sus scrofa GN=OGT PE=2 SV=1 | 46 | 393 | 3.0E-10 |
| sp|O15294|OGT1_HUMAN | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3 | 46 | 393 | 3.0E-10 |
| sp|P56558|OGT1_RAT | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Rattus norvegicus GN=Ogt PE=1 SV=1 | 46 | 393 | 3.0E-10 |
| sp|P81436|OGT1_RABIT | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Oryctolagus cuniculus GN=OGT PE=1 SV=2 | 46 | 393 | 3.0E-10 |
| sp|O18158|OGT1_CAEEL | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase OS=Caenorhabditis elegans GN=ogt-1 PE=1 SV=2 | 57 | 393 | 4.0E-10 |
| sp|Q4V8A2|CDC27_RAT | Cell division cycle protein 27 homolog OS=Rattus norvegicus GN=Cdc27 PE=2 SV=1 | 150 | 355 | 6.0E-10 |
| sp|O82039|SPY_PETHY | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Petunia hybrida GN=SPY PE=2 SV=1 | 48 | 176 | 7.0E-10 |
| sp|A2A6Q5|CDC27_MOUSE | Cell division cycle protein 27 homolog OS=Mus musculus GN=Cdc27 PE=1 SV=1 | 150 | 355 | 7.0E-10 |
| sp|Q8RVB2|SPY_SOLLC | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Solanum lycopersicum GN=SPY PE=2 SV=1 | 48 | 176 | 7.0E-10 |
| sp|Q8LP10|SPY_EUSER | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Eustoma exaltatum subsp. russellianum GN=SPY PE=2 SV=1 | 59 | 390 | 1.0E-09 |
| sp|P30260|CDC27_HUMAN | Cell division cycle protein 27 homolog OS=Homo sapiens GN=CDC27 PE=1 SV=2 | 150 | 355 | 1.0E-09 |
| sp|A7Z061|CDC27_BOVIN | Cell division cycle protein 27 homolog OS=Bos taurus GN=CDC27 PE=2 SV=1 | 49 | 217 | 1.0E-09 |
| sp|P30260|CDC27_HUMAN | Cell division cycle protein 27 homolog OS=Homo sapiens GN=CDC27 PE=1 SV=2 | 49 | 217 | 1.0E-09 |
| sp|A2A6Q5|CDC27_MOUSE | Cell division cycle protein 27 homolog OS=Mus musculus GN=Cdc27 PE=1 SV=1 | 57 | 217 | 1.0E-09 |
| sp|Q4V8A2|CDC27_RAT | Cell division cycle protein 27 homolog OS=Rattus norvegicus GN=Cdc27 PE=2 SV=1 | 57 | 217 | 1.0E-09 |
| sp|Q96301|SPY_ARATH | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Arabidopsis thaliana GN=SPY PE=1 SV=1 | 48 | 176 | 1.0E-09 |
| sp|A7Z061|CDC27_BOVIN | Cell division cycle protein 27 homolog OS=Bos taurus GN=CDC27 PE=2 SV=1 | 150 | 355 | 2.0E-09 |
| sp|Q8RVB2|SPY_SOLLC | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Solanum lycopersicum GN=SPY PE=2 SV=1 | 83 | 390 | 2.0E-09 |
| sp|Q28G25|BBS4_XENTR | Bardet-Biedl syndrome 4 protein homolog OS=Xenopus tropicalis GN=bbs4 PE=2 SV=1 | 58 | 347 | 2.0E-09 |
| sp|O82422|SPY_HORVU | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Hordeum vulgare GN=SPY PE=2 SV=1 | 48 | 176 | 4.0E-09 |
| sp|Q6PGP7|TTC37_HUMAN | Tetratricopeptide repeat protein 37 OS=Homo sapiens GN=TTC37 PE=1 SV=1 | 48 | 353 | 1.0E-08 |
| sp|O18158|OGT1_CAEEL | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase OS=Caenorhabditis elegans GN=ogt-1 PE=1 SV=2 | 90 | 390 | 2.0E-08 |
| sp|Q6YZI0|SPY_ORYSJ | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Oryza sativa subsp. japonica GN=SPY PE=3 SV=1 | 48 | 176 | 2.0E-08 |
| sp|Q8VD33|SGTB_MOUSE | Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus GN=Sgtb PE=1 SV=1 | 225 | 459 | 4.0E-08 |
| sp|Q80W98|SGTB_RAT | Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus norvegicus GN=Sgtb PE=1 SV=1 | 225 | 459 | 4.0E-08 |
| sp|Q8LP10|SPY_EUSER | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Eustoma exaltatum subsp. russellianum GN=SPY PE=2 SV=1 | 48 | 176 | 4.0E-08 |
| sp|Q4V8A2|CDC27_RAT | Cell division cycle protein 27 homolog OS=Rattus norvegicus GN=Cdc27 PE=2 SV=1 | 43 | 230 | 5.0E-08 |
| sp|A2A6Q5|CDC27_MOUSE | Cell division cycle protein 27 homolog OS=Mus musculus GN=Cdc27 PE=1 SV=1 | 43 | 252 | 6.0E-08 |
| sp|O82422|SPY_HORVU | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Hordeum vulgare GN=SPY PE=2 SV=1 | 20 | 355 | 6.0E-08 |
| sp|P30260|CDC27_HUMAN | Cell division cycle protein 27 homolog OS=Homo sapiens GN=CDC27 PE=1 SV=2 | 43 | 252 | 6.0E-08 |
| sp|A7Z061|CDC27_BOVIN | Cell division cycle protein 27 homolog OS=Bos taurus GN=CDC27 PE=2 SV=1 | 43 | 230 | 7.0E-08 |
| sp|Q8IUR5|TMTC1_HUMAN | Transmembrane and TPR repeat-containing protein 1 OS=Homo sapiens GN=TMTC1 PE=1 SV=3 | 46 | 399 | 8.0E-08 |
| sp|Q3UV71|TMTC1_MOUSE | Transmembrane and TPR repeat-containing protein 1 OS=Mus musculus GN=Tmtc1 PE=2 SV=2 | 58 | 355 | 1.0E-07 |
| sp|Q96301|SPY_ARATH | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Arabidopsis thaliana GN=SPY PE=1 SV=1 | 42 | 320 | 1.0E-07 |
| sp|O82039|SPY_PETHY | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Petunia hybrida GN=SPY PE=2 SV=1 | 30 | 212 | 2.0E-07 |
| sp|Q96EQ0|SGTB_HUMAN | Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sapiens GN=SGTB PE=1 SV=1 | 297 | 459 | 2.0E-07 |
| sp|Q6B4Z3|UTY_PANTR | Histone demethylase UTY OS=Pan troglodytes GN=UTY PE=2 SV=1 | 42 | 316 | 2.0E-07 |
| sp|Q9M8Y0|SEC_ARATH | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC OS=Arabidopsis thaliana GN=SEC PE=2 SV=1 | 43 | 237 | 3.0E-07 |
| sp|Q13099|IFT88_HUMAN | Intraflagellar transport protein 88 homolog OS=Homo sapiens GN=IFT88 PE=2 SV=2 | 44 | 314 | 4.0E-07 |
| sp|Q01495|PEX5_PICAN | Peroxisomal targeting signal receptor OS=Pichia angusta GN=PEX5 PE=1 SV=1 | 154 | 409 | 4.0E-07 |
| sp|O82039|SPY_PETHY | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Petunia hybrida GN=SPY PE=2 SV=1 | 20 | 320 | 5.0E-07 |
| sp|Q80XJ3|TTC28_MOUSE | Tetratricopeptide repeat protein 28 OS=Mus musculus GN=Ttc28 PE=1 SV=3 | 59 | 387 | 5.0E-07 |
| sp|Q8RVB2|SPY_SOLLC | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Solanum lycopersicum GN=SPY PE=2 SV=1 | 30 | 212 | 7.0E-07 |
| sp|P10505|APC3_SCHPO | Anaphase-promoting complex subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nuc2 PE=1 SV=3 | 188 | 422 | 7.0E-07 |
| sp|Q96301|SPY_ARATH | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Arabidopsis thaliana GN=SPY PE=1 SV=1 | 30 | 205 | 9.0E-07 |
| sp|Q1JQ97|BBS4_BOVIN | Bardet-Biedl syndrome 4 protein homolog OS=Bos taurus GN=BBS4 PE=2 SV=1 | 58 | 363 | 1.0E-06 |
| sp|Q8RVB2|SPY_SOLLC | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Solanum lycopersicum GN=SPY PE=2 SV=1 | 29 | 320 | 1.0E-06 |
| sp|O14607|UTY_HUMAN | Histone demethylase UTY OS=Homo sapiens GN=UTY PE=1 SV=2 | 43 | 316 | 1.0E-06 |
| sp|P81436|OGT1_RABIT | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Oryctolagus cuniculus GN=OGT PE=1 SV=2 | 43 | 267 | 2.0E-06 |
| sp|Q61371|IFT88_MOUSE | Intraflagellar transport protein 88 homolog OS=Mus musculus GN=Ift88 PE=1 SV=2 | 20 | 315 | 2.0E-06 |
| sp|P0CT30|SGT2_USTMA | Small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=UMAG_10205 PE=3 SV=1 | 297 | 399 | 2.0E-06 |
| sp|Q27HV0|OGT1_PIG | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Sus scrofa GN=OGT PE=2 SV=1 | 43 | 267 | 2.0E-06 |
| sp|P56558|OGT1_RAT | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Rattus norvegicus GN=Ogt PE=1 SV=1 | 43 | 267 | 2.0E-06 |
| sp|Q8CGY8|OGT1_MOUSE | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Mus musculus GN=Ogt PE=1 SV=2 | 43 | 267 | 2.0E-06 |
| sp|Q4V8A2|CDC27_RAT | Cell division cycle protein 27 homolog OS=Rattus norvegicus GN=Cdc27 PE=2 SV=1 | 267 | 396 | 2.0E-06 |
| sp|O15294|OGT1_HUMAN | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3 | 43 | 267 | 2.0E-06 |
| sp|A7Z061|CDC27_BOVIN | Cell division cycle protein 27 homolog OS=Bos taurus GN=CDC27 PE=2 SV=1 | 267 | 396 | 3.0E-06 |
| sp|P30260|CDC27_HUMAN | Cell division cycle protein 27 homolog OS=Homo sapiens GN=CDC27 PE=1 SV=2 | 267 | 396 | 3.0E-06 |
| sp|A2A6Q5|CDC27_MOUSE | Cell division cycle protein 27 homolog OS=Mus musculus GN=Cdc27 PE=1 SV=1 | 267 | 396 | 3.0E-06 |
| sp|Q57711|Y941_METJA | TPR repeat-containing protein MJ0941 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0941 PE=3 SV=3 | 57 | 180 | 5.0E-06 |
| sp|O70593|SGTA_RAT | Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus GN=Sgta PE=1 SV=1 | 286 | 412 | 6.0E-06 |
| sp|B5X0I6|VIP6_ARATH | Protein CTR9 homolog OS=Arabidopsis thaliana GN=VIP6 PE=1 SV=1 | 58 | 358 | 7.0E-06 |
| sp|Q8BJU0|SGTA_MOUSE | Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus GN=Sgta PE=1 SV=2 | 286 | 412 | 8.0E-06 |
| sp|P17885|BIMA_EMENI | Protein bimA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bimA PE=2 SV=1 | 182 | 404 | 9.0E-06 |
| sp|Q06AN9|CD27A_ARATH | Cell division cycle protein 27 homolog A OS=Arabidopsis thaliana GN=CDC27A PE=1 SV=2 | 79 | 264 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5306 MANHHPSPTMMQMQHQAQVAAQGVQQGHYAPSHQIASMNEAVWLQIGSFSELLRVPDEAMHAYERALQANPNSAA ALNAIGMLLKGREAFDKALEFFRAIVQLEQNNGEAWGNLGHCYLMTENLQKAYDAYQQALVNLRDPKDPMLWYGI GILYDRYGSYDYAEEAFSQVMQIQPDFEKANEIYFRLGIIYKQQSKFNQSLECFKYIVNSPPGPLTQEDIWFQIG HVHEQQKDFDNAKAAYQRVLDHSPNHAKVLQQLGWLHHQQNNSYETQDRAIQYLEKSVSADNTDAQSWYLLGRCY MSQQKYPKAYEAYQQAVYRDGKNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPYISEVWYDLGTLYESCNNQI ADALDAYQRAAELDPGNPHIKARLQLLRAASNNGGGAPPAPQPADVHPQAYQAAGPSGPVGPQWGGSAQQPPSGG PPPPPAGAGENWARGLSNVNPPPQPPNPYEGRGEPFRGPPPPPQRQPSPPQEPPMRQQPYSDVIRGGPPRRGMSP AGHGQYSQGPPPPPPALGPAPVDRRVVNPNWGGATPSASAPPSSSANGANPPPNGMAPYRSIHSPRADGRLAHDN RMPSPKSAYPQHQAPPPAYVHHPEAPPQAGPESGPAPPPTAPEVSAQRLDDRPPSVGPKRMREWEEESAAKKQAN EENRARLDDMRHRRPSTPPAPRDAYRRNSPESRRADDPRRGEDSRKVDDARSQSDGYHPSEAAHHAPPVGPSQLP PMPQAGGPAQEKPQAGPVLKEERPAADQVTMPPPAPAAAEPERAARKMDVDEDYDDSGEDDKKAVLTNGSAQGPG SADGKTTSPTGAGVNGPSSAVAKGE |
| Coding | >Ophio5|5306 ATGGCGAATCACCATCCGTCGCCTACCATGATGCAGATGCAACATCAAGCCCAGGTGGCGGCCCAGGGCGTCCAG CAGGGTCATTACGCCCCGTCGCATCAGATCGCCTCCATGAACGAGGCCGTCTGGCTGCAGATTGGGAGCTTCTCG GAACTCCTGCGCGTGCCGGATGAGGCCATGCACGCCTACGAGCGTGCTCTCCAAGCCAATCCCAACTCGGCCGCT GCTCTGAATGCCATTGGCATGCTCCTCAAGGGCCGTGAGGCATTTGACAAGGCTCTCGAGTTCTTTCGCGCTATT GTCCAATTGGAGCAGAACAATGGCGAGGCCTGGGGAAATTTGGGTCACTGCTATCTCATGACAGAAAATCTTCAA AAAGCATACGATGCGTATCAACAAGCGCTGGTCAACCTCAGGGATCCCAAGGATCCGATGCTCTGGTACGGCATC GGCATACTGTACGATAGGTACGGCAGCTATGACTATGCCGAAGAAGCCTTTTCCCAGGTTATGCAGATTCAGCCC GACTTCGAAAAGGCCAACGAGATTTATTTCCGCTTGGGTATCATCTACAAGCAGCAGTCCAAGTTCAATCAGAGC CTTGAGTGTTTCAAGTACATAGTCAACTCGCCTCCCGGGCCTTTGACACAAGAGGACATTTGGTTCCAGATCGGT CACGTGCATGAGCAGCAGAAAGACTTCGACAATGCCAAGGCTGCCTATCAACGCGTCTTGGATCATTCGCCCAAC CATGCCAAGGTACTGCAACAGCTTGGCTGGCTCCATCACCAGCAGAACAACTCCTACGAAACCCAGGATAGGGCC ATCCAGTATCTGGAAAAGTCCGTCAGCGCAGACAACACCGACGCCCAGAGCTGGTACTTACTCGGCCGGTGTTAC ATGTCGCAGCAAAAGTATCCCAAAGCGTACGAGGCCTACCAGCAGGCCGTGTATCGTGATGGGAAGAACCCGACA TTCTGGTGTTCCATTGGTGTGCTTTACTATCAAATCAACCAGTATCGGGATGCTCTCGACGCATATTCGCGTGCC ATCAGGCTAAATCCTTACATTTCCGAGGTGTGGTATGACCTGGGTACACTGTACGAGTCTTGCAACAACCAAATC GCCGACGCGCTGGATGCGTATCAGAGGGCCGCGGAGCTCGACCCTGGTAATCCCCACATCAAGGCTCGTCTGCAG CTTCTCCGCGCCGCCTCCAACAACGGCGGCGGCGCGCCCCCGGCTCCCCAGCCGGCAGACGTCCATCCTCAGGCT TATCAGGCTGCCGGACCGTCGGGCCCGGTCGGACCCCAGTGGGGGGGCTCTGCACAGCAGCCGCCCTCGGGCGGG CCGCCGCCGCCGCCAGCGGGGGCTGGGGAGAACTGGGCGCGTGGACTTTCCAACGTCAACCCGCCTCCGCAGCCC CCCAATCCTTACGAGGGACGGGGAGAGCCCTTCCGCGGCCCGCCGCCGCCTCCGCAGCGTCAACCTAGCCCGCCG CAGGAGCCGCCGATGCGGCAGCAGCCTTATTCTGATGTCATCAGGGGGGGGCCTCCGCGCCGCGGCATGTCTCCG GCTGGACACGGGCAATACTCGCAGGGCCCCCCTCCGCCGCCCCCCGCGTTGGGCCCGGCGCCGGTTGATCGAAGG GTGGTGAACCCCAATTGGGGTGGTGCTACGCCGTCCGCCTCCGCGCCCCCATCGAGCTCCGCAAACGGGGCCAAC CCTCCGCCAAACGGTATGGCTCCTTACAGGTCGATCCACAGCCCTCGTGCTGACGGCCGTCTTGCCCACGACAAC CGGATGCCTTCACCCAAGTCGGCTTACCCGCAACACCAAGCCCCACCCCCGGCTTACGTTCATCACCCGGAAGCG CCGCCTCAAGCCGGGCCCGAGAGCGGACCGGCCCCGCCGCCGACGGCTCCTGAGGTGTCGGCCCAGCGTCTGGAT GACAGACCGCCCTCGGTCGGTCCTAAGCGGATGCGAGAGTGGGAGGAGGAGTCTGCTGCCAAGAAGCAGGCAAAC GAGGAGAACCGGGCGCGGCTCGATGATATGAGGCATCGGAGGCCCTCAACTCCTCCCGCCCCTCGAGACGCGTAC CGTCGCAACTCGCCCGAGTCGAGAAGGGCCGACGATCCGCGCCGCGGCGAGGATTCGAGGAAGGTTGACGACGCA CGCTCCCAGAGCGATGGCTACCATCCCTCGGAGGCTGCCCACCATGCTCCGCCCGTCGGCCCTAGTCAACTACCG CCTATGCCGCAGGCAGGCGGCCCTGCGCAAGAGAAGCCGCAAGCTGGGCCGGTACTCAAGGAGGAACGGCCCGCA GCGGACCAGGTCACCATGCCCCCCCCGGCTCCGGCGGCGGCGGAACCCGAGCGAGCGGCGAGGAAGATGGACGTG GACGAGGATTACGACGACAGCGGTGAGGACGATAAGAAGGCAGTGCTCACCAACGGTTCAGCGCAGGGACCAGGC TCCGCGGACGGGAAGACGACATCGCCCACTGGCGCCGGTGTGAATGGTCCCTCCAGCGCCGTCGCTAAAGGCGAG |
| Transcript | >Ophio5|5306 ATGGCGAATCACCATCCGTCGCCTACCATGATGCAGATGCAACATCAAGCCCAGGTGGCGGCCCAGGGCGTCCAG CAGGGTCATTACGCCCCGTCGCATCAGATCGCCTCCATGAACGAGGCCGTCTGGCTGCAGATTGGGAGCTTCTCG GAACTCCTGCGCGTGCCGGATGAGGCCATGCACGCCTACGAGCGTGCTCTCCAAGCCAATCCCAACTCGGCCGCT GCTCTGAATGCCATTGGCATGCTCCTCAAGGGCCGTGAGGCATTTGACAAGGCTCTCGAGTTCTTTCGCGCTATT GTCCAATTGGAGCAGAACAATGGCGAGGCCTGGGGAAATTTGGGTCACTGCTATCTCATGACAGAAAATCTTCAA AAAGCATACGATGCGTATCAACAAGCGCTGGTCAACCTCAGGGATCCCAAGGATCCGATGCTCTGGTACGGCATC GGCATACTGTACGATAGGTACGGCAGCTATGACTATGCCGAAGAAGCCTTTTCCCAGGTTATGCAGATTCAGCCC GACTTCGAAAAGGCCAACGAGATTTATTTCCGCTTGGGTATCATCTACAAGCAGCAGTCCAAGTTCAATCAGAGC CTTGAGTGTTTCAAGTACATAGTCAACTCGCCTCCCGGGCCTTTGACACAAGAGGACATTTGGTTCCAGATCGGT CACGTGCATGAGCAGCAGAAAGACTTCGACAATGCCAAGGCTGCCTATCAACGCGTCTTGGATCATTCGCCCAAC CATGCCAAGGTACTGCAACAGCTTGGCTGGCTCCATCACCAGCAGAACAACTCCTACGAAACCCAGGATAGGGCC ATCCAGTATCTGGAAAAGTCCGTCAGCGCAGACAACACCGACGCCCAGAGCTGGTACTTACTCGGCCGGTGTTAC ATGTCGCAGCAAAAGTATCCCAAAGCGTACGAGGCCTACCAGCAGGCCGTGTATCGTGATGGGAAGAACCCGACA TTCTGGTGTTCCATTGGTGTGCTTTACTATCAAATCAACCAGTATCGGGATGCTCTCGACGCATATTCGCGTGCC ATCAGGCTAAATCCTTACATTTCCGAGGTGTGGTATGACCTGGGTACACTGTACGAGTCTTGCAACAACCAAATC GCCGACGCGCTGGATGCGTATCAGAGGGCCGCGGAGCTCGACCCTGGTAATCCCCACATCAAGGCTCGTCTGCAG CTTCTCCGCGCCGCCTCCAACAACGGCGGCGGCGCGCCCCCGGCTCCCCAGCCGGCAGACGTCCATCCTCAGGCT TATCAGGCTGCCGGACCGTCGGGCCCGGTCGGACCCCAGTGGGGGGGCTCTGCACAGCAGCCGCCCTCGGGCGGG CCGCCGCCGCCGCCAGCGGGGGCTGGGGAGAACTGGGCGCGTGGACTTTCCAACGTCAACCCGCCTCCGCAGCCC CCCAATCCTTACGAGGGACGGGGAGAGCCCTTCCGCGGCCCGCCGCCGCCTCCGCAGCGTCAACCTAGCCCGCCG CAGGAGCCGCCGATGCGGCAGCAGCCTTATTCTGATGTCATCAGGGGGGGGCCTCCGCGCCGCGGCATGTCTCCG GCTGGACACGGGCAATACTCGCAGGGCCCCCCTCCGCCGCCCCCCGCGTTGGGCCCGGCGCCGGTTGATCGAAGG GTGGTGAACCCCAATTGGGGTGGTGCTACGCCGTCCGCCTCCGCGCCCCCATCGAGCTCCGCAAACGGGGCCAAC CCTCCGCCAAACGGTATGGCTCCTTACAGGTCGATCCACAGCCCTCGTGCTGACGGCCGTCTTGCCCACGACAAC CGGATGCCTTCACCCAAGTCGGCTTACCCGCAACACCAAGCCCCACCCCCGGCTTACGTTCATCACCCGGAAGCG CCGCCTCAAGCCGGGCCCGAGAGCGGACCGGCCCCGCCGCCGACGGCTCCTGAGGTGTCGGCCCAGCGTCTGGAT GACAGACCGCCCTCGGTCGGTCCTAAGCGGATGCGAGAGTGGGAGGAGGAGTCTGCTGCCAAGAAGCAGGCAAAC GAGGAGAACCGGGCGCGGCTCGATGATATGAGGCATCGGAGGCCCTCAACTCCTCCCGCCCCTCGAGACGCGTAC CGTCGCAACTCGCCCGAGTCGAGAAGGGCCGACGATCCGCGCCGCGGCGAGGATTCGAGGAAGGTTGACGACGCA CGCTCCCAGAGCGATGGCTACCATCCCTCGGAGGCTGCCCACCATGCTCCGCCCGTCGGCCCTAGTCAACTACCG CCTATGCCGCAGGCAGGCGGCCCTGCGCAAGAGAAGCCGCAAGCTGGGCCGGTACTCAAGGAGGAACGGCCCGCA GCGGACCAGGTCACCATGCCCCCCCCGGCTCCGGCGGCGGCGGAACCCGAGCGAGCGGCGAGGAAGATGGACGTG GACGAGGATTACGACGACAGCGGTGAGGACGATAAGAAGGCAGTGCTCACCAACGGTTCAGCGCAGGGACCAGGC TCCGCGGACGGGAAGACGACATCGCCCACTGGCGCCGGTGTGAATGGTCCCTCCAGCGCCGTCGCTAAAGGCGAG TGA |
| Gene | >Ophio5|5306 ATGGCGAATCACCATCCGTCGCCTACCATGATGCAGATGCAACATCAAGCCCAGGTGGCGGCCCAGGGCGTCCAG CAGGGTCATTACGCCCCGTCGCATCAGATCGCCTCCATGAACGAGGCCGTCTGGCTGCAGATTGGTAAGGTTACC GTCCTCCCTTTTTTTTTCCCCATGTCCATTGTTGACCGTCTTGCCCCCAGGGAGCTTCTCGGAACTCCTGCGCGT GCCGGATGAGGCCATGCACGCCTACGAGCGTGCTCTCCAAGCCAATCCCAACTCGGCCGCTGCTCTGAATGCCAT TGGCATGCTCCTCAAGGGCCGTGAGGCATTTGACAAGGCTCTCGAGTTCTTTCGCGCTATTGTCCAATTGGAGCA GAACAATGGCGAGGCCTGGGGAAATTTGGGTATGCTTCGTCTCTAACCCTTTGCTTGTTCAACACGCTCATCGAC GAGACAGGTCACTGCTATCTCATGACAGAAAATCTTCAAAAAGCATACGATGCGTATCAACAAGCGCTGGTCAAC CTCAGGGATCCCAAGGTATTACATCTCTCCCTCCGCCAGTCTGCGCTCGTGCCTGACCTTGTTCTCGTAGGATCC GATGCTCTGGTACGGCATCGGCATACTGTACGATAGGTACGGCAGCTATGACTATGCCGAAGAAGCCTTTTCCCA GGTTATGCAGATTCAGCCCGACTTCGAAAAGGCCAACGAGATTTATTTCCGCTTGGGTATCATCTACAAGCAGCA GTCCAAGTTCAATCAGAGCCTTGAGGTGAGATGAAATCGCCTCGCTCCCGTCCTTGAACATGTTGGACCATTTGC TTATTCCGTCTGTCCAGTGTTTCAAGTACATAGTCAACTCGCCTCCCGGGCCTTTGACACAAGAGGACATTTGGT TCCAGATCGGTCACGTGCATGAGCAGCAGAAAGACGTAGGTCTTGACTTAGCTGGCTAGTCTATCTGGTGGTGGT ATCACTGACGTGTGCTTCTTGTCTAGTTCGACAATGCCAAGGCTGCCTATCAACGCGTCTTGGATCATTCGCCCA ACCATGCCAAGGTACTGCAACAGCTTGGCTGGCTCCATCACCAGCAGAACAACTCCTACGAAACCCAGGATAGGG CCATCCAGTATCTGGAAAAGTCCGTCAGCGCAGGTACGCCCCTTACCGTCCAGCAGCCGCATGCCGTGGAGCCTT AGCTGACCAACGCTTCTCCAGACAACACCGACGCCCAGAGCTGGTACTTACTCGGCCGGTGTTACATGTCGCAGC AAAAGTATCCCAAAGCGTACGAGGCCTACCAGCAGGCCGTGTATCGTGATGGGAAGAACCCGACATTCTGGTGTT CCATTGGTGTGCTTTACTATCAAATCAACCAGTATCGGGATGCTCTCGACGCATATTCGCGTGCCATCAGGCTAA ATCCTTACATTTCCGAGGTGTGGTATGACCTGGGTACACTGGTAAGTCTTGCTCCTTGTCCGCTTTGTTCTCTCC TCCAACTTGACAGCTGACTTTGCCCCCCAGTACGAGTCTTGCAACAACCAAATCGCCGACGCGCTGGATGCGTAT CAGAGGGCCGCGGAGCTCGACCCTGGTAATCCCCACATCAAGGCTCGTCTGCAGCTTCTCCGCGCCGCCTCCAAC AACGGCGGCGGCGCGCCCCCGGCTCCCCAGCCGGCAGACGTCCATCCTCAGGCTTATCAGGCTGCCGGACCGTCG GGCCCGGTCGGACCCCAGTGGGGGGGCTCTGCACAGCAGCCGCCCTCGGGCGGGCCGCCGCCGCCGCCAGCGGGG GCTGGGGAGAACTGGGCGCGTGGACTTTCCAACGTCAACCCGCCTCCGCAGCCCCCCAATCCTTACGAGGGACGG GGAGAGCCCTTCCGCGGCCCGCCGCCGCCTCCGCAGCGTCAACCTAGCCCGCCGCAGGAGCCGCCGATGCGGCAG CAGCCTTATTCTGATGTCATCAGGGGGGGGCCTCCGCGCCGCGGCATGTCTCCGGCTGGACACGGGCAATACTCG CAGGGCCCCCCTCCGCCGCCCCCCGCGTTGGGCCCGGCGCCGGTTGATCGAAGGGTGGTGAACCCCAATTGGGGT GGTGCTACGCCGTCCGCCTCCGCGCCCCCATCGAGCTCCGCAAACGGGGCCAACCCTCCGCCAAACGGTATGGCT CCTTACAGGTCGATCCACAGCCCTCGTGCTGACGGCCGTCTTGCCCACGACAACCGGATGCCTTCACCCAAGTCG GCTTACCCGCAACACCAAGCCCCACCCCCGGCTTACGTTCATCACCCGGAAGCGCCGCCTCAAGCCGGGCCCGAG AGCGGACCGGCCCCGCCGCCGACGGCTCCTGAGGTGTCGGCCCAGCGTCTGGATGACAGACCGCCCTCGGTCGGT CCTAAGCGGATGCGAGAGTGGGAGGAGGAGTCTGCTGCCAAGAAGCAGGCAAACGAGGAGAACCGGGCGCGGCTC GATGATATGAGGCATCGGAGGCCCTCAACTCCTCCCGCCCCTCGAGACGCGTACCGTCGCAACTCGCCCGAGTCG AGAAGGGCCGACGATCCGCGCCGCGGCGAGGATTCGAGGAAGGTTGACGACGCACGCTCCCAGAGCGATGGCTAC CATCCCTCGGAGGCTGCCCACCATGCTCCGCCCGTCGGCCCTAGTCAACTACCGCCTATGCCGCAGGCAGGCGGC CCTGCGCAAGAGAAGCCGCAAGCTGGGCCGGTACTCAAGGAGGAACGGCCCGCAGCGGACCAGGTCACCATGCCC CCCCCGGCTCCGGCGGCGGCGGAACCCGAGCGAGCGGCGAGGAAGATGGACGTGGACGAGGATTACGACGACAGC GGTGAGGACGATAAGAAGGCAGTGCTCACCAACGGTTCAGCGCAGGGACCAGGCTCCGCGGACGGGAAGACGACA TCGCCCACTGGCGCCGGTGTGAATGGTCCCTCCAGCGCCGTCGCTAAAGGCGAGTGA |