Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5290
Gene name
Locationscaffold_43:7055..8896
Strand+
Gene length (bp)1841
Transcript length (bp)1566
Coding sequence length (bp)1563
Protein length (aa) 521

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 4.9E-08 154 185
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 4.0E-06 208 312

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q59QC7|UPC2_CANAL Sterol uptake control protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UPC2 PE=1 SV=1 144 198 2.0E-10
sp|Q12151|UPC2_YEAST Sterol uptake control protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPC2 PE=1 SV=1 201 315 1.0E-09
sp|Q12151|UPC2_YEAST Sterol uptake control protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPC2 PE=1 SV=1 144 184 2.0E-09
sp|Q05958|ECM22_YEAST Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 144 189 3.0E-08
sp|Q05958|ECM22_YEAST Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 201 311 9.0E-08
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Swissprot ID Swissprot Description Start End E-value
sp|Q59QC7|UPC2_CANAL Sterol uptake control protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UPC2 PE=1 SV=1 144 198 2.0E-10
sp|Q12151|UPC2_YEAST Sterol uptake control protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPC2 PE=1 SV=1 201 315 1.0E-09
sp|Q12151|UPC2_YEAST Sterol uptake control protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPC2 PE=1 SV=1 144 184 2.0E-09
sp|Q05958|ECM22_YEAST Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 144 189 3.0E-08
sp|Q05958|ECM22_YEAST Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 201 311 9.0E-08
sp|Q9UT46|MOC3_SCHPO Transcriptional regulatory protein moc3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=moc3 PE=1 SV=4 150 186 2.0E-06
sp|O74308|YOG2_SCHPO Uncharacterized transcriptional regulatory protein C15D4.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15D4.02 PE=3 SV=3 107 189 6.0E-06
sp|Q59MD2|UME6_CANAL Transcriptional regulatory protein UME6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UME6 PE=2 SV=1 138 186 8.0E-06
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GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0140110 transcription regulator activity No
GO:0031323 regulation of cellular metabolic process No
GO:0065007 biological regulation No
GO:0046872 metal ion binding No
GO:0010468 regulation of gene expression No
GO:0043167 ion binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0005488 binding No
GO:0080090 regulation of primary metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0050789 regulation of biological process No
GO:0003700 DNA-binding transcription factor activity No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:2001141 regulation of RNA biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0031326 regulation of cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5290
MLDSGDYPVFAPEPSRGGAESLVPADGRQRDAGGGQTVCVVAVHNEESVSPVDGCWKTTPFFFHPSTTGRRPPLV
GAMDMRHFSASVLPFAGPEFDYSSLLQPDDGAVPLPTPAGPASESPDRPTPSSPDAVVRRQPAQRQRLERRGHTK
SRRGCYNCKRRRIKCQETRPACGHCVKTGLECEYPSLPRIIHQPQHQIPLFSLQDMRLFQHFLTQCYPVHPLKQD
EIWTHEIPCIAHNHDFLMHAVLGFAASELSHTEESSDLLTAAMNHRVKAIRAIKKRLTEGSGVDMTYEEANALVA
TCFALTFQSVSLDDGLPEYMTFIRGILIIGMQMMLKGITPLFDSLFEDRQDELMAAPILGFPLIPSGWADAAAVA
ISALRPLCVDAVEVAYHRQLTAIAQKLQISSFDAYQANAREYAWWMMLPHATFQQLINLNRQTTILLHTHWIALS
QIMALITEREHEARERRTRRDRGMDPGFIRWLRYLNTRVDLEHQAYNQWPVWVDEQLNRDVTLVAFLGNRR
Coding >Ophio5|5290
ATGCTCGATTCGGGCGACTATCCCGTCTTTGCACCTGAGCCGTCTCGCGGCGGAGCAGAGAGTCTCGTCCCTGCA
GATGGGAGACAGCGCGATGCCGGGGGCGGCCAGACTGTGTGTGTCGTCGCCGTACATAACGAAGAGAGCGTCTCA
CCGGTTGACGGTTGTTGGAAAACCACCCCCTTTTTTTTTCATCCATCAACGACAGGACGCCGCCCCCCTCTCGTC
GGAGCCATGGATATGCGGCACTTTTCCGCGAGCGTGCTTCCCTTCGCTGGACCCGAGTTCGACTACTCCTCGCTG
CTGCAGCCCGACGATGGCGCCGTGCCGCTACCGACGCCGGCCGGCCCGGCCTCCGAGTCTCCCGATCGGCCCACG
CCATCTAGTCCGGACGCCGTCGTCCGGCGTCAACCGGCGCAGCGGCAGAGGCTAGAGCGCCGAGGTCACACCAAG
AGTCGTCGGGGCTGCTACAACTGCAAGAGGCGACGCATCAAGTGTCAAGAGACGCGTCCTGCTTGCGGCCACTGC
GTCAAGACAGGGCTCGAGTGCGAGTATCCCTCGCTGCCGCGCATCATCCATCAGCCTCAACATCAGATTCCACTC
TTCAGTCTACAAGACATGCGTCTCTTTCAACATTTTCTCACTCAGTGTTATCCGGTTCATCCTCTCAAGCAGGAC
GAGATCTGGACTCATGAGATCCCCTGCATCGCGCACAACCACGACTTTCTGATGCACGCCGTTCTCGGCTTCGCC
GCCTCGGAGCTCTCTCATACCGAAGAGAGCAGCGACCTGCTAACAGCTGCCATGAACCACCGCGTCAAGGCCATC
CGGGCCATCAAGAAGCGCCTGACCGAGGGCTCCGGCGTCGATATGACCTATGAGGAGGCCAACGCGCTCGTGGCG
ACGTGCTTTGCCCTGACATTTCAGTCGGTCAGCCTGGACGATGGACTACCCGAGTACATGACGTTTATCCGCGGC
ATCCTCATCATCGGCATGCAAATGATGCTCAAGGGTATCACGCCCCTCTTCGACAGCCTGTTTGAAGACCGGCAG
GACGAGCTGATGGCAGCGCCCATACTCGGCTTTCCGCTGATTCCCAGTGGCTGGGCGGATGCCGCTGCCGTGGCC
ATATCAGCTCTGCGGCCGCTGTGCGTCGATGCGGTCGAGGTGGCGTACCATCGGCAGCTCACTGCCATTGCACAG
AAATTGCAGATCAGCTCCTTTGACGCTTACCAGGCCAATGCCAGAGAATACGCCTGGTGGATGATGCTCCCCCAC
GCCACATTCCAGCAGCTCATCAATCTCAACCGGCAGACGACGATACTTCTTCACACACACTGGATTGCCCTTTCA
CAGATCATGGCCCTGATTACGGAGAGAGAGCACGAGGCCAGGGAAAGACGCACGCGGCGGGATCGCGGCATGGAC
CCGGGCTTCATCAGGTGGCTGAGGTATCTCAACACGCGAGTCGACTTGGAGCACCAGGCATATAATCAGTGGCCC
GTCTGGGTGGACGAGCAGCTCAACAGAGACGTCACCTTGGTCGCCTTTCTCGGCAACCGAAGA
Transcript >Ophio5|5290
ATGCTCGATTCGGGCGACTATCCCGTCTTTGCACCTGAGCCGTCTCGCGGCGGAGCAGAGAGTCTCGTCCCTGCA
GATGGGAGACAGCGCGATGCCGGGGGCGGCCAGACTGTGTGTGTCGTCGCCGTACATAACGAAGAGAGCGTCTCA
CCGGTTGACGGTTGTTGGAAAACCACCCCCTTTTTTTTTCATCCATCAACGACAGGACGCCGCCCCCCTCTCGTC
GGAGCCATGGATATGCGGCACTTTTCCGCGAGCGTGCTTCCCTTCGCTGGACCCGAGTTCGACTACTCCTCGCTG
CTGCAGCCCGACGATGGCGCCGTGCCGCTACCGACGCCGGCCGGCCCGGCCTCCGAGTCTCCCGATCGGCCCACG
CCATCTAGTCCGGACGCCGTCGTCCGGCGTCAACCGGCGCAGCGGCAGAGGCTAGAGCGCCGAGGTCACACCAAG
AGTCGTCGGGGCTGCTACAACTGCAAGAGGCGACGCATCAAGTGTCAAGAGACGCGTCCTGCTTGCGGCCACTGC
GTCAAGACAGGGCTCGAGTGCGAGTATCCCTCGCTGCCGCGCATCATCCATCAGCCTCAACATCAGATTCCACTC
TTCAGTCTACAAGACATGCGTCTCTTTCAACATTTTCTCACTCAGTGTTATCCGGTTCATCCTCTCAAGCAGGAC
GAGATCTGGACTCATGAGATCCCCTGCATCGCGCACAACCACGACTTTCTGATGCACGCCGTTCTCGGCTTCGCC
GCCTCGGAGCTCTCTCATACCGAAGAGAGCAGCGACCTGCTAACAGCTGCCATGAACCACCGCGTCAAGGCCATC
CGGGCCATCAAGAAGCGCCTGACCGAGGGCTCCGGCGTCGATATGACCTATGAGGAGGCCAACGCGCTCGTGGCG
ACGTGCTTTGCCCTGACATTTCAGTCGGTCAGCCTGGACGATGGACTACCCGAGTACATGACGTTTATCCGCGGC
ATCCTCATCATCGGCATGCAAATGATGCTCAAGGGTATCACGCCCCTCTTCGACAGCCTGTTTGAAGACCGGCAG
GACGAGCTGATGGCAGCGCCCATACTCGGCTTTCCGCTGATTCCCAGTGGCTGGGCGGATGCCGCTGCCGTGGCC
ATATCAGCTCTGCGGCCGCTGTGCGTCGATGCGGTCGAGGTGGCGTACCATCGGCAGCTCACTGCCATTGCACAG
AAATTGCAGATCAGCTCCTTTGACGCTTACCAGGCCAATGCCAGAGAATACGCCTGGTGGATGATGCTCCCCCAC
GCCACATTCCAGCAGCTCATCAATCTCAACCGGCAGACGACGATACTTCTTCACACACACTGGATTGCCCTTTCA
CAGATCATGGCCCTGATTACGGAGAGAGAGCACGAGGCCAGGGAAAGACGCACGCGGCGGGATCGCGGCATGGAC
CCGGGCTTCATCAGGTGGCTGAGGTATCTCAACACGCGAGTCGACTTGGAGCACCAGGCATATAATCAGTGGCCC
GTCTGGGTGGACGAGCAGCTCAACAGAGACGTCACCTTGGTCGCCTTTCTCGGCAACCGAAGATAG
Gene >Ophio5|5290
ATGCTCGATTCGGGCGACTATCCCGTCTTTGCACCTGAGCCGTCTCGCGGCGGAGCAGAGAGTCTCGTCCCTGCA
GATGGGAGACGTATGTATTATGTATGTGTATGGATGTATTTATTATTGCAGAGCGCGATGCCGGGGGCGGCCAGA
CTGTGTGTGTCGTCGCCGTACATAACGAAGAGAGCGTCTCACCGGTTGACGGTTGTTGGAAAACCACCCCCTTTT
TTTTTCATCCATCAACGACAGGACGCCGCCCCCCTCTCGTCGGAGCCATGGATATGCGGCACTTTTCCGCGAGCG
TGCTTCCCTTCGCTGGACCCGAGTTCGACTACTCCTCGCTGCTGCAGCCCGACGATGGCGCCGTGCCGCTACCGA
CGCCGGCCGGCCCGGCCTCCGAGTCTCCCGATCGGCCCACGCCATCTAGTCCGGACGCCGTCGTCCGGCGTCAAC
CGGCGCAGCGGCAGAGGCTAGAGCGCCGAGGTCACACCAAGAGTCGTCGGGGCTGCTACAACTGCAAGAGGCGAC
GCATCAAGGTGCGGATTGGCCTCCGGGTTTTGTGTTTCCTCCCTGACTAGCTCTGGCCCAGTGTCAAGAGACGCG
TCCTGCTTGCGGCCACTGCGTCAAGACAGGGCTCGAGTGCGAGTATCCCTCGCTGCCGCGCATCATCCATCAGGT
GTGTGTGTTTTGAGAGTCCCCCCCCAAAAAGTAGGCGGTGCCCTGACCGCACCCTTCCTCGTCCAGCCTCAACAT
CAGATTCCACTCTTCAGTCTACAAGACATGCGTCTCTTTCAACATTTTCTCACTCAGTGTTATCCGGTTCATCCT
CTCAAGCAGGACGAGATCTGGACTCATGAGATCCCCTGCATCGCGCACAACGTATTGCCCCCCCTTACTCACACG
TATAACGTCTGGCTCACGCCGTGCAAAAGCACGACTTTCTGATGCACGCCGTTCTCGGCTTCGCCGCCTCGGAGC
TCTCTCATACCGAAGAGAGCAGCGACCTGCTAACAGCTGCCATGAACCACCGCGTCAAGGCCATCCGGGCCATCA
AGAAGCGCCTGACCGAGGGCTCCGGCGTCGATATGACCTATGAGGAGGCCAACGCGCTCGTGGCGACGTGCTTTG
CCCTGACATTTCAGTCGGTCAGCCTGGACGATGGACTACCCGAGTACATGACGTTTATCCGCGGCATCCTCATCA
TCGGCATGCAAATGATGCTCAAGGGTATCACGCCCCTCTTCGACAGCCTGTTTGAAGACCGGCAGGACGAGCTGA
TGGCAGCGCCCATACTCGGCTTTCCGCTGATTCCCAGTGGCTGGGCGGATGCCGCTGCCGTGGCCATATCAGCTC
TGCGGCCGCTGTGCGTCGATGCGGTCGAGGTGGCGTACCATCGGCAGCTCACTGCCATTGCACAGAAATTGCAGA
TCAGCTCCTTTGACGGTGGGTCGTCCGTCTGTATATCTTCCTTTTTATATCCATTCACGGCTGACGGGCCGCCAG
CTTACCAGGCCAATGCCAGAGAATACGCCTGGTGGATGATGCTCCCCCACGCCACATTCCAGCAGCTCATCAATC
TCAACCGGCAGACGACGATACTTCTTCACACACACTGGATTGCCCTTTCACAGATCATGGCCCTGATTACGGAGA
GAGAGCACGAGGCCAGGGAAAGACGCACGCGGCGGGATCGCGGCATGGACCCGGGCTTCATCAGGTGGCTGAGGT
ATCTCAACACGCGAGTCGACTTGGAGCACCAGGCATATAATCAGTGGCCCGTCTGGGTGGACGAGCAGCTCAACA
GAGACGTCACCTTGGTCGCCTTTCTCGGCAACCGAAGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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