© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5290 |
| Gene name | |
| Location | scaffold_43:7055..8896 |
| Strand | + |
| Gene length (bp) | 1841 |
| Transcript length (bp) | 1566 |
| Coding sequence length (bp) | 1563 |
| Protein length (aa) | 521 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00172 | Zn_clus | Fungal Zn(2)-Cys(6) binuclear cluster domain | 4.9E-08 | 154 | 185 |
| PF11951 | Fungal_trans_2 | Fungal specific transcription factor domain | 4.0E-06 | 208 | 312 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q59QC7|UPC2_CANAL | Sterol uptake control protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UPC2 PE=1 SV=1 | 144 | 198 | 2.0E-10 |
| sp|Q12151|UPC2_YEAST | Sterol uptake control protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPC2 PE=1 SV=1 | 201 | 315 | 1.0E-09 |
| sp|Q12151|UPC2_YEAST | Sterol uptake control protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPC2 PE=1 SV=1 | 144 | 184 | 2.0E-09 |
| sp|Q05958|ECM22_YEAST | Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 | 144 | 189 | 3.0E-08 |
| sp|Q05958|ECM22_YEAST | Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 | 201 | 311 | 9.0E-08 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q59QC7|UPC2_CANAL | Sterol uptake control protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UPC2 PE=1 SV=1 | 144 | 198 | 2.0E-10 |
| sp|Q12151|UPC2_YEAST | Sterol uptake control protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPC2 PE=1 SV=1 | 201 | 315 | 1.0E-09 |
| sp|Q12151|UPC2_YEAST | Sterol uptake control protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPC2 PE=1 SV=1 | 144 | 184 | 2.0E-09 |
| sp|Q05958|ECM22_YEAST | Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 | 144 | 189 | 3.0E-08 |
| sp|Q05958|ECM22_YEAST | Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 | 201 | 311 | 9.0E-08 |
| sp|Q9UT46|MOC3_SCHPO | Transcriptional regulatory protein moc3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=moc3 PE=1 SV=4 | 150 | 186 | 2.0E-06 |
| sp|O74308|YOG2_SCHPO | Uncharacterized transcriptional regulatory protein C15D4.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15D4.02 PE=3 SV=3 | 107 | 189 | 6.0E-06 |
| sp|Q59MD2|UME6_CANAL | Transcriptional regulatory protein UME6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UME6 PE=2 SV=1 | 138 | 186 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0008270 | zinc ion binding | Yes |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Yes |
| GO:0008150 | biological_process | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0140110 | transcription regulator activity | No |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0065007 | biological regulation | No |
| GO:0046872 | metal ion binding | No |
| GO:0010468 | regulation of gene expression | No |
| GO:0043167 | ion binding | No |
| GO:0043169 | cation binding | No |
| GO:0003674 | molecular_function | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:0005488 | binding | No |
| GO:0080090 | regulation of primary metabolic process | No |
| GO:0009889 | regulation of biosynthetic process | No |
| GO:0050789 | regulation of biological process | No |
| GO:0003700 | DNA-binding transcription factor activity | No |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 27 | 0.45 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| Fungal Specific TF |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5290 MLDSGDYPVFAPEPSRGGAESLVPADGRQRDAGGGQTVCVVAVHNEESVSPVDGCWKTTPFFFHPSTTGRRPPLV GAMDMRHFSASVLPFAGPEFDYSSLLQPDDGAVPLPTPAGPASESPDRPTPSSPDAVVRRQPAQRQRLERRGHTK SRRGCYNCKRRRIKCQETRPACGHCVKTGLECEYPSLPRIIHQPQHQIPLFSLQDMRLFQHFLTQCYPVHPLKQD EIWTHEIPCIAHNHDFLMHAVLGFAASELSHTEESSDLLTAAMNHRVKAIRAIKKRLTEGSGVDMTYEEANALVA TCFALTFQSVSLDDGLPEYMTFIRGILIIGMQMMLKGITPLFDSLFEDRQDELMAAPILGFPLIPSGWADAAAVA ISALRPLCVDAVEVAYHRQLTAIAQKLQISSFDAYQANAREYAWWMMLPHATFQQLINLNRQTTILLHTHWIALS QIMALITEREHEARERRTRRDRGMDPGFIRWLRYLNTRVDLEHQAYNQWPVWVDEQLNRDVTLVAFLGNRR |
| Coding | >Ophio5|5290 ATGCTCGATTCGGGCGACTATCCCGTCTTTGCACCTGAGCCGTCTCGCGGCGGAGCAGAGAGTCTCGTCCCTGCA GATGGGAGACAGCGCGATGCCGGGGGCGGCCAGACTGTGTGTGTCGTCGCCGTACATAACGAAGAGAGCGTCTCA CCGGTTGACGGTTGTTGGAAAACCACCCCCTTTTTTTTTCATCCATCAACGACAGGACGCCGCCCCCCTCTCGTC GGAGCCATGGATATGCGGCACTTTTCCGCGAGCGTGCTTCCCTTCGCTGGACCCGAGTTCGACTACTCCTCGCTG CTGCAGCCCGACGATGGCGCCGTGCCGCTACCGACGCCGGCCGGCCCGGCCTCCGAGTCTCCCGATCGGCCCACG CCATCTAGTCCGGACGCCGTCGTCCGGCGTCAACCGGCGCAGCGGCAGAGGCTAGAGCGCCGAGGTCACACCAAG AGTCGTCGGGGCTGCTACAACTGCAAGAGGCGACGCATCAAGTGTCAAGAGACGCGTCCTGCTTGCGGCCACTGC GTCAAGACAGGGCTCGAGTGCGAGTATCCCTCGCTGCCGCGCATCATCCATCAGCCTCAACATCAGATTCCACTC TTCAGTCTACAAGACATGCGTCTCTTTCAACATTTTCTCACTCAGTGTTATCCGGTTCATCCTCTCAAGCAGGAC GAGATCTGGACTCATGAGATCCCCTGCATCGCGCACAACCACGACTTTCTGATGCACGCCGTTCTCGGCTTCGCC GCCTCGGAGCTCTCTCATACCGAAGAGAGCAGCGACCTGCTAACAGCTGCCATGAACCACCGCGTCAAGGCCATC CGGGCCATCAAGAAGCGCCTGACCGAGGGCTCCGGCGTCGATATGACCTATGAGGAGGCCAACGCGCTCGTGGCG ACGTGCTTTGCCCTGACATTTCAGTCGGTCAGCCTGGACGATGGACTACCCGAGTACATGACGTTTATCCGCGGC ATCCTCATCATCGGCATGCAAATGATGCTCAAGGGTATCACGCCCCTCTTCGACAGCCTGTTTGAAGACCGGCAG GACGAGCTGATGGCAGCGCCCATACTCGGCTTTCCGCTGATTCCCAGTGGCTGGGCGGATGCCGCTGCCGTGGCC ATATCAGCTCTGCGGCCGCTGTGCGTCGATGCGGTCGAGGTGGCGTACCATCGGCAGCTCACTGCCATTGCACAG AAATTGCAGATCAGCTCCTTTGACGCTTACCAGGCCAATGCCAGAGAATACGCCTGGTGGATGATGCTCCCCCAC GCCACATTCCAGCAGCTCATCAATCTCAACCGGCAGACGACGATACTTCTTCACACACACTGGATTGCCCTTTCA CAGATCATGGCCCTGATTACGGAGAGAGAGCACGAGGCCAGGGAAAGACGCACGCGGCGGGATCGCGGCATGGAC CCGGGCTTCATCAGGTGGCTGAGGTATCTCAACACGCGAGTCGACTTGGAGCACCAGGCATATAATCAGTGGCCC GTCTGGGTGGACGAGCAGCTCAACAGAGACGTCACCTTGGTCGCCTTTCTCGGCAACCGAAGA |
| Transcript | >Ophio5|5290 ATGCTCGATTCGGGCGACTATCCCGTCTTTGCACCTGAGCCGTCTCGCGGCGGAGCAGAGAGTCTCGTCCCTGCA GATGGGAGACAGCGCGATGCCGGGGGCGGCCAGACTGTGTGTGTCGTCGCCGTACATAACGAAGAGAGCGTCTCA CCGGTTGACGGTTGTTGGAAAACCACCCCCTTTTTTTTTCATCCATCAACGACAGGACGCCGCCCCCCTCTCGTC GGAGCCATGGATATGCGGCACTTTTCCGCGAGCGTGCTTCCCTTCGCTGGACCCGAGTTCGACTACTCCTCGCTG CTGCAGCCCGACGATGGCGCCGTGCCGCTACCGACGCCGGCCGGCCCGGCCTCCGAGTCTCCCGATCGGCCCACG CCATCTAGTCCGGACGCCGTCGTCCGGCGTCAACCGGCGCAGCGGCAGAGGCTAGAGCGCCGAGGTCACACCAAG AGTCGTCGGGGCTGCTACAACTGCAAGAGGCGACGCATCAAGTGTCAAGAGACGCGTCCTGCTTGCGGCCACTGC GTCAAGACAGGGCTCGAGTGCGAGTATCCCTCGCTGCCGCGCATCATCCATCAGCCTCAACATCAGATTCCACTC TTCAGTCTACAAGACATGCGTCTCTTTCAACATTTTCTCACTCAGTGTTATCCGGTTCATCCTCTCAAGCAGGAC GAGATCTGGACTCATGAGATCCCCTGCATCGCGCACAACCACGACTTTCTGATGCACGCCGTTCTCGGCTTCGCC GCCTCGGAGCTCTCTCATACCGAAGAGAGCAGCGACCTGCTAACAGCTGCCATGAACCACCGCGTCAAGGCCATC CGGGCCATCAAGAAGCGCCTGACCGAGGGCTCCGGCGTCGATATGACCTATGAGGAGGCCAACGCGCTCGTGGCG ACGTGCTTTGCCCTGACATTTCAGTCGGTCAGCCTGGACGATGGACTACCCGAGTACATGACGTTTATCCGCGGC ATCCTCATCATCGGCATGCAAATGATGCTCAAGGGTATCACGCCCCTCTTCGACAGCCTGTTTGAAGACCGGCAG GACGAGCTGATGGCAGCGCCCATACTCGGCTTTCCGCTGATTCCCAGTGGCTGGGCGGATGCCGCTGCCGTGGCC ATATCAGCTCTGCGGCCGCTGTGCGTCGATGCGGTCGAGGTGGCGTACCATCGGCAGCTCACTGCCATTGCACAG AAATTGCAGATCAGCTCCTTTGACGCTTACCAGGCCAATGCCAGAGAATACGCCTGGTGGATGATGCTCCCCCAC GCCACATTCCAGCAGCTCATCAATCTCAACCGGCAGACGACGATACTTCTTCACACACACTGGATTGCCCTTTCA CAGATCATGGCCCTGATTACGGAGAGAGAGCACGAGGCCAGGGAAAGACGCACGCGGCGGGATCGCGGCATGGAC CCGGGCTTCATCAGGTGGCTGAGGTATCTCAACACGCGAGTCGACTTGGAGCACCAGGCATATAATCAGTGGCCC GTCTGGGTGGACGAGCAGCTCAACAGAGACGTCACCTTGGTCGCCTTTCTCGGCAACCGAAGATAG |
| Gene | >Ophio5|5290 ATGCTCGATTCGGGCGACTATCCCGTCTTTGCACCTGAGCCGTCTCGCGGCGGAGCAGAGAGTCTCGTCCCTGCA GATGGGAGACGTATGTATTATGTATGTGTATGGATGTATTTATTATTGCAGAGCGCGATGCCGGGGGCGGCCAGA CTGTGTGTGTCGTCGCCGTACATAACGAAGAGAGCGTCTCACCGGTTGACGGTTGTTGGAAAACCACCCCCTTTT TTTTTCATCCATCAACGACAGGACGCCGCCCCCCTCTCGTCGGAGCCATGGATATGCGGCACTTTTCCGCGAGCG TGCTTCCCTTCGCTGGACCCGAGTTCGACTACTCCTCGCTGCTGCAGCCCGACGATGGCGCCGTGCCGCTACCGA CGCCGGCCGGCCCGGCCTCCGAGTCTCCCGATCGGCCCACGCCATCTAGTCCGGACGCCGTCGTCCGGCGTCAAC CGGCGCAGCGGCAGAGGCTAGAGCGCCGAGGTCACACCAAGAGTCGTCGGGGCTGCTACAACTGCAAGAGGCGAC GCATCAAGGTGCGGATTGGCCTCCGGGTTTTGTGTTTCCTCCCTGACTAGCTCTGGCCCAGTGTCAAGAGACGCG TCCTGCTTGCGGCCACTGCGTCAAGACAGGGCTCGAGTGCGAGTATCCCTCGCTGCCGCGCATCATCCATCAGGT GTGTGTGTTTTGAGAGTCCCCCCCCAAAAAGTAGGCGGTGCCCTGACCGCACCCTTCCTCGTCCAGCCTCAACAT CAGATTCCACTCTTCAGTCTACAAGACATGCGTCTCTTTCAACATTTTCTCACTCAGTGTTATCCGGTTCATCCT CTCAAGCAGGACGAGATCTGGACTCATGAGATCCCCTGCATCGCGCACAACGTATTGCCCCCCCTTACTCACACG TATAACGTCTGGCTCACGCCGTGCAAAAGCACGACTTTCTGATGCACGCCGTTCTCGGCTTCGCCGCCTCGGAGC TCTCTCATACCGAAGAGAGCAGCGACCTGCTAACAGCTGCCATGAACCACCGCGTCAAGGCCATCCGGGCCATCA AGAAGCGCCTGACCGAGGGCTCCGGCGTCGATATGACCTATGAGGAGGCCAACGCGCTCGTGGCGACGTGCTTTG CCCTGACATTTCAGTCGGTCAGCCTGGACGATGGACTACCCGAGTACATGACGTTTATCCGCGGCATCCTCATCA TCGGCATGCAAATGATGCTCAAGGGTATCACGCCCCTCTTCGACAGCCTGTTTGAAGACCGGCAGGACGAGCTGA TGGCAGCGCCCATACTCGGCTTTCCGCTGATTCCCAGTGGCTGGGCGGATGCCGCTGCCGTGGCCATATCAGCTC TGCGGCCGCTGTGCGTCGATGCGGTCGAGGTGGCGTACCATCGGCAGCTCACTGCCATTGCACAGAAATTGCAGA TCAGCTCCTTTGACGGTGGGTCGTCCGTCTGTATATCTTCCTTTTTATATCCATTCACGGCTGACGGGCCGCCAG CTTACCAGGCCAATGCCAGAGAATACGCCTGGTGGATGATGCTCCCCCACGCCACATTCCAGCAGCTCATCAATC TCAACCGGCAGACGACGATACTTCTTCACACACACTGGATTGCCCTTTCACAGATCATGGCCCTGATTACGGAGA GAGAGCACGAGGCCAGGGAAAGACGCACGCGGCGGGATCGCGGCATGGACCCGGGCTTCATCAGGTGGCTGAGGT ATCTCAACACGCGAGTCGACTTGGAGCACCAGGCATATAATCAGTGGCCCGTCTGGGTGGACGAGCAGCTCAACA GAGACGTCACCTTGGTCGCCTTTCTCGGCAACCGAAGATAG |