© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5274 |
| Gene name | |
| Location | scaffold_427:12592..14948 |
| Strand | - |
| Gene length (bp) | 2356 |
| Transcript length (bp) | 2169 |
| Coding sequence length (bp) | 2166 |
| Protein length (aa) | 722 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1817 | 0.1079 | 0.7695 | 0.1153 | 0.1991 | 0.0933 | 0.3357 | 0.2087 | 0.2666 | 0.0336 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 22 | 0.999447 |
| Orthofinder run ID | 4 |
| Orthogroup | 2 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5274 MDLLSLLSLCLFPLVCLSSVIGQSSSPGLAGHHVVPEVYGPSERFESWKRLKRRSVESGPASGATAIPNEQVENK LIAIGLYLRPSYSMAVGDVNSFHQAIIVSSATNHIEVYDAVNSVVSGQTFVDGKPPWRFQFEETISPEKARLLVA RVVLGETVASSADIYKILEPLPMPCRGENCVSWVKSGLQALQDARHLQPFDIDLVVLKAVDYGVPRHKLALKPGA MDFATWEKYRNTISRYQPREGIIVPDPAAVKIEQNVAKAEARKVTAGPSTGSKQTLEEVYSSPADEMKKRSLKNF KMLVDRHGLEDIQQRTKLSTDQLHERFMDKHKGNFRLTPRGVGLTTLGGVAVIAWGYSIYDVFKQDSTALEKTAV VTALVPVVGCVTQALANDQSSSLNIARIADYHVCLVADGLTVSGFWAIGIPLQVMRILTHGVMEIIKFREKVKEE NLHQLRSEGWKKVLERFETVLRSESYIGNVGLELDATRAGILLAASEAYADFEAGMTESLNETLPTSPRKAHDVA NAQAEALNMIHQETCRKLQQSKEELRWQLKRDLGRALHHQSREYDDRFATNLLKEWETKSFSVSRQELSKSYRRV MEKNPLMAMEGVRGLSGIIDQHLGVAWALPPNCSHPDPLPPRPRPRNPDCDDPCPSKASGTPVFEELTGVGKGQF ECVFRNPQGQSIYEFRPICCPFTNMERLVTAVDRVERVRCVDKKPKR |
| Coding | >Ophio5|5274 ATGGACCTCCTCTCCCTTCTCTCGCTTTGCCTGTTTCCTCTCGTCTGCCTGTCTTCGGTCATCGGACAGTCGTCG AGTCCGGGGCTAGCCGGGCATCATGTCGTGCCCGAGGTTTATGGCCCTAGTGAGCGTTTCGAGAGCTGGAAGCGA CTCAAACGCCGTTCAGTGGAATCGGGTCCAGCGTCAGGAGCAACAGCCATTCCGAACGAGCAGGTGGAGAACAAG CTCATCGCCATTGGACTCTACTTGCGACCTAGTTATAGCATGGCAGTGGGAGATGTCAATTCTTTTCACCAGGCC ATCATCGTCAGCTCAGCAACAAACCATATCGAGGTTTACGACGCGGTGAATTCGGTGGTTTCCGGCCAGACTTTT GTCGACGGAAAGCCGCCCTGGAGGTTCCAGTTCGAAGAAACCATCAGCCCCGAGAAAGCCAGGCTTTTGGTGGCG AGGGTTGTGCTCGGAGAAACGGTGGCCTCGTCAGCAGATATTTATAAGATCCTAGAGCCTCTGCCGATGCCTTGC CGCGGTGAGAATTGTGTCAGCTGGGTCAAGTCAGGGTTGCAGGCGCTTCAAGACGCCCGTCATCTGCAGCCGTTT GATATCGATCTAGTGGTGCTGAAAGCCGTCGACTACGGCGTCCCGAGACACAAGTTGGCTTTGAAACCCGGTGCT ATGGACTTTGCTACTTGGGAGAAATACAGGAACACAATATCGCGCTATCAACCAAGAGAGGGCATCATTGTTCCT GACCCGGCGGCGGTAAAGATTGAGCAGAATGTGGCGAAGGCCGAGGCCCGGAAAGTCACGGCAGGACCTTCGACG GGCAGCAAACAAACTCTGGAAGAGGTCTATTCATCACCGGCCGATGAGATGAAGAAACGGTCGCTCAAGAACTTC AAGATGCTCGTCGACCGTCATGGTCTCGAGGACATTCAGCAACGCACCAAATTGAGTACTGATCAGTTGCACGAG CGCTTCATGGACAAACACAAAGGCAACTTCAGGTTGACGCCAAGAGGTGTAGGTTTGACCACCCTGGGCGGTGTG GCTGTCATCGCCTGGGGCTATTCCATCTACGATGTCTTCAAGCAAGATTCGACGGCTCTGGAGAAGACGGCGGTT GTGACGGCCCTGGTGCCAGTCGTCGGCTGCGTGACCCAGGCGTTAGCTAATGATCAGTCCTCTTCGCTAAACATT GCCCGCATCGCTGACTATCATGTCTGTCTCGTTGCCGATGGCTTGACAGTGTCTGGATTCTGGGCAATCGGCATT CCGCTCCAGGTGATGCGAATACTCACCCACGGGGTCATGGAAATCATCAAGTTTCGTGAAAAGGTAAAGGAGGAG AACCTGCATCAGTTACGTTCTGAAGGCTGGAAGAAGGTTCTAGAGCGGTTTGAAACGGTGCTTCGGTCGGAGAGC TACATAGGCAACGTCGGCCTTGAGCTTGACGCTACCAGGGCCGGTATCCTGCTTGCCGCATCAGAAGCCTATGCA GATTTCGAAGCCGGAATGACGGAAAGCCTAAACGAGACGCTGCCGACGTCGCCAAGAAAGGCTCATGACGTTGCC AACGCCCAGGCCGAGGCCTTGAACATGATTCATCAAGAAACTTGTAGGAAGCTCCAGCAAAGCAAGGAGGAACTC CGGTGGCAACTGAAGCGTGATCTTGGCAGAGCCCTTCACCACCAGTCGCGGGAGTATGACGATAGATTTGCTACA AATCTACTCAAGGAGTGGGAGACCAAGAGCTTCAGCGTCTCTCGCCAGGAACTGTCCAAATCCTACCGGCGAGTG ATGGAAAAGAACCCCCTCATGGCAATGGAGGGGGTGAGAGGCCTGAGCGGCATCATCGACCAGCATCTCGGAGTA GCATGGGCCTTGCCGCCGAACTGCTCCCATCCCGATCCGCTGCCGCCGCGGCCGCGACCTCGGAACCCGGACTGC GATGACCCTTGCCCATCGAAGGCCAGCGGCACGCCGGTTTTCGAGGAGTTGACTGGTGTCGGCAAGGGGCAATTC GAATGCGTCTTCCGCAACCCGCAGGGCCAGTCCATTTACGAGTTCAGACCCATTTGTTGTCCTTTTACGAATATG GAGCGGCTAGTTACCGCCGTTGATCGAGTCGAGCGCGTGCGATGTGTTGACAAGAAGCCCAAGAGG |
| Transcript | >Ophio5|5274 ATGGACCTCCTCTCCCTTCTCTCGCTTTGCCTGTTTCCTCTCGTCTGCCTGTCTTCGGTCATCGGACAGTCGTCG AGTCCGGGGCTAGCCGGGCATCATGTCGTGCCCGAGGTTTATGGCCCTAGTGAGCGTTTCGAGAGCTGGAAGCGA CTCAAACGCCGTTCAGTGGAATCGGGTCCAGCGTCAGGAGCAACAGCCATTCCGAACGAGCAGGTGGAGAACAAG CTCATCGCCATTGGACTCTACTTGCGACCTAGTTATAGCATGGCAGTGGGAGATGTCAATTCTTTTCACCAGGCC ATCATCGTCAGCTCAGCAACAAACCATATCGAGGTTTACGACGCGGTGAATTCGGTGGTTTCCGGCCAGACTTTT GTCGACGGAAAGCCGCCCTGGAGGTTCCAGTTCGAAGAAACCATCAGCCCCGAGAAAGCCAGGCTTTTGGTGGCG AGGGTTGTGCTCGGAGAAACGGTGGCCTCGTCAGCAGATATTTATAAGATCCTAGAGCCTCTGCCGATGCCTTGC CGCGGTGAGAATTGTGTCAGCTGGGTCAAGTCAGGGTTGCAGGCGCTTCAAGACGCCCGTCATCTGCAGCCGTTT GATATCGATCTAGTGGTGCTGAAAGCCGTCGACTACGGCGTCCCGAGACACAAGTTGGCTTTGAAACCCGGTGCT ATGGACTTTGCTACTTGGGAGAAATACAGGAACACAATATCGCGCTATCAACCAAGAGAGGGCATCATTGTTCCT GACCCGGCGGCGGTAAAGATTGAGCAGAATGTGGCGAAGGCCGAGGCCCGGAAAGTCACGGCAGGACCTTCGACG GGCAGCAAACAAACTCTGGAAGAGGTCTATTCATCACCGGCCGATGAGATGAAGAAACGGTCGCTCAAGAACTTC AAGATGCTCGTCGACCGTCATGGTCTCGAGGACATTCAGCAACGCACCAAATTGAGTACTGATCAGTTGCACGAG CGCTTCATGGACAAACACAAAGGCAACTTCAGGTTGACGCCAAGAGGTGTAGGTTTGACCACCCTGGGCGGTGTG GCTGTCATCGCCTGGGGCTATTCCATCTACGATGTCTTCAAGCAAGATTCGACGGCTCTGGAGAAGACGGCGGTT GTGACGGCCCTGGTGCCAGTCGTCGGCTGCGTGACCCAGGCGTTAGCTAATGATCAGTCCTCTTCGCTAAACATT GCCCGCATCGCTGACTATCATGTCTGTCTCGTTGCCGATGGCTTGACAGTGTCTGGATTCTGGGCAATCGGCATT CCGCTCCAGGTGATGCGAATACTCACCCACGGGGTCATGGAAATCATCAAGTTTCGTGAAAAGGTAAAGGAGGAG AACCTGCATCAGTTACGTTCTGAAGGCTGGAAGAAGGTTCTAGAGCGGTTTGAAACGGTGCTTCGGTCGGAGAGC TACATAGGCAACGTCGGCCTTGAGCTTGACGCTACCAGGGCCGGTATCCTGCTTGCCGCATCAGAAGCCTATGCA GATTTCGAAGCCGGAATGACGGAAAGCCTAAACGAGACGCTGCCGACGTCGCCAAGAAAGGCTCATGACGTTGCC AACGCCCAGGCCGAGGCCTTGAACATGATTCATCAAGAAACTTGTAGGAAGCTCCAGCAAAGCAAGGAGGAACTC CGGTGGCAACTGAAGCGTGATCTTGGCAGAGCCCTTCACCACCAGTCGCGGGAGTATGACGATAGATTTGCTACA AATCTACTCAAGGAGTGGGAGACCAAGAGCTTCAGCGTCTCTCGCCAGGAACTGTCCAAATCCTACCGGCGAGTG ATGGAAAAGAACCCCCTCATGGCAATGGAGGGGGTGAGAGGCCTGAGCGGCATCATCGACCAGCATCTCGGAGTA GCATGGGCCTTGCCGCCGAACTGCTCCCATCCCGATCCGCTGCCGCCGCGGCCGCGACCTCGGAACCCGGACTGC GATGACCCTTGCCCATCGAAGGCCAGCGGCACGCCGGTTTTCGAGGAGTTGACTGGTGTCGGCAAGGGGCAATTC GAATGCGTCTTCCGCAACCCGCAGGGCCAGTCCATTTACGAGTTCAGACCCATTTGTTGTCCTTTTACGAATATG GAGCGGCTAGTTACCGCCGTTGATCGAGTCGAGCGCGTGCGATGTGTTGACAAGAAGCCCAAGAGGTAA |
| Gene | >Ophio5|5274 ATGGACCTCCTCTCCCTTCTCTCGCTTTGCCTGTTTCCTCTCGTCTGCCTGTCTTCGGTCATCGGACAGTCGTCG AGTCCGGGGCTAGCCGGGCATCATGTCGTGCCCGAGGTTTATGGCCCTAGTGAGCGTTTCGAGAGGTGTGGTGTT TGCAATTCGTATGGAATTGTGATTTTTCTAATGCATGAGACGGCACAAGCATTAGCTGGAAGCGACTCAAACGCC GTTCAGTGGAATCGGGTCCAGCGTCAGGAGCAACAGCCATTCCGAACGAGCAGGTGGAGAACAAGCTCATCGCCA TTGGACTCTACTTGCGACCTAGTTATAGCATGGCAGTGGGAGATGTCAATTCTTTTCACCAGGCCATCATCGTCA GCTCAGCAACAAACCATATCGAGGTTTACGACGCGGTGAATTCGGTGGTTTCCGGCCAGACTTTTGTCGACGGAA AGCCGCCCTGGAGGTTCCAGTTCGAAGAAACCATCAGCCCCGAGAAAGCCAGGCTTTTGGTGGCGAGGGTTGTGC TCGGAGAAACGGTGGCCTCGTCAGCAGATATTTATAAGATCCTAGAGCCTCTGCCGATGCCTTGCCGCGGTGAGA ATTGTGTCAGCTGGGTCAAGTCAGGGTTGCAGGCGCTTCAAGACGCCCGTCATCTGCAGCCGTTTGATATCGATC TAGTGGTGCTGAAAGCCGTCGACTACGGCGTCCCGAGACACAAGTTGGCTTTGAAACCCGGTGCTATGGACTTTG CTACTTGGGAGAAATACAGGAACACAATATCGCGCTATCAACCAAGAGAGGGCATCATTGTTCCTGACCCGGCGG CGGTAAAGATTGAGCAGAATGGTAAGCTCCTGTTGCTTCCACCATTCATGTCCTCGTGTCAACTAGAGACCTAGT GGCGAAGGCCGAGGCCCGGAAAGTCACGGCAGGACCTTCGACGGGCAGCAAACAAACTCTGGAAGAGGTCTATTC ATCACCGGCCGATGAGATGAAGAAACGGTCGCTCAAGAACTTCAAGATGCTCGTCGACCGTCATGGTCTCGAGGA CATTCAGCAACGCACCAAATTGAGTACTGATCAGTTGCACGAGCGCTTCATGGACAAACACAAAGGCAACTTCAG GTTGACGCCAAGAGGTGTAGGTTTGACCACCCTGGGCGGTGTGGCTGTCATCGCCTGGGGCTATTCCATCTACGA TGTCTTCAAGCAAGATTCGACGGCTCTGGAGAAGACGGCGGTTGTGACGGCCCTGGTGCCAGTCGTCGGCTGCGT GACCCAGGCGTTAGCTAATGATCAGTCCTCTTCGCTAAACATTGCCCGCATCGCTGACTATCATGTCTGTCTCGT TGCCGATGGCTTGACAGTGTCTGGATTCTGGGCAATCGGCATTCCGCTCCAGGTGATGCGAATACTCACCCACGG GGTCATGGAAATCATCAAGTTTCGTGAAAAGGTAAAGGAGGAGAACCTGCATCAGTTACGTTCTGAAGGCTGGAA GAAGGTTCTAGAGCGGTTTGAAACGGTGCTTCGGTCGGAGAGCTACATAGGCAACGTCGGCCTTGAGCTTGACGC TACCAGGGCCGGTATCCTGCTTGCCGCATCAGAAGCCTATGCAGATTTCGAAGCCGGAATGACGGAAAGCCTAAA CGAGACGCTGCCGACGTCGCCAAGAAAGGCTCATGACGTTGCCAACGCCCAGGCCGAGGCCTTGAACATGATTCA TCAAGAAACTTGTAGGAAGCTCCAGCAAAGCAAGGAGGAACTCCGGTGGCAACTGAAGCGTGATCTTGGCAGAGC CCTTCACCACCAGTCGCGGGAGTATGACGATAGATTTGCTACAAATCTACTCAAGGAGTGGGAGACCAAGAGCTT CAGCGTCTCTCGCCAGGAACTGTCCAAATCCTACCGGCGAGTGATGGAAAAGAACCCCCTCATGGCAATGGAGGG GGTGAGAGGCCTGAGCGGCATCATCGACCAGCATCTCGGAGTAGCATGGGCCTTGCCGCCGAACTGCTCCCATCC CGATCCGCTGCCGCCGCGGCCGCGACCTCGGAACCCGGACTGCGATGACCCTTGCCCATCGAAGGCCAGCGGCAC GCCGGTTTTCGAGGAGTTGACTGGTGTCGGCAAGGGGCAATTCGAATGCGTCTTCCGCAACCCGCAGGGCCAGTC CATTTACGAGTTCAGACCCATTTGTTGTCCTTTTACGAATATGGAGCGGCTAGTTACCGCCGTTGATCGAGTCGA GGTAAGTCTGGTTACGTTGGCAGTAATGTGTTTTCGTTGGGCTGACAAGATTTACTTACTATTCCTGTAGCGCGT GCGATGTGTTGACAAGAAGCCCAAGAGGTAA |