Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5267
Gene name
Locationscaffold_426:12325..13949
Strand-
Gene length (bp)1624
Transcript length (bp)1410
Coding sequence length (bp)1407
Protein length (aa) 469

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13692 Glyco_trans_1_4 Glycosyl transferases group 1 8.4E-07 313 428

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D4AZD1|ALG1_ARTBC Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01551 PE=3 SV=1 86 453 9.0E-96
sp|Q9BT22|ALG1_HUMAN Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Homo sapiens GN=ALG1 PE=1 SV=2 44 457 4.0E-86
sp|Q5R7A2|ALG1_PONAB Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Pongo abelii GN=ALG1 PE=2 SV=1 44 457 6.0E-86
sp|Q921Q3|ALG1_MOUSE Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Mus musculus GN=Alg1 PE=1 SV=3 50 469 1.0E-84
sp|O13933|ALG1_SCHPO Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg1 PE=3 SV=2 51 453 8.0E-83
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Swissprot ID Swissprot Description Start End E-value
sp|D4AZD1|ALG1_ARTBC Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01551 PE=3 SV=1 86 453 9.0E-96
sp|Q9BT22|ALG1_HUMAN Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Homo sapiens GN=ALG1 PE=1 SV=2 44 457 4.0E-86
sp|Q5R7A2|ALG1_PONAB Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Pongo abelii GN=ALG1 PE=2 SV=1 44 457 6.0E-86
sp|Q921Q3|ALG1_MOUSE Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Mus musculus GN=Alg1 PE=1 SV=3 50 469 1.0E-84
sp|O13933|ALG1_SCHPO Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg1 PE=3 SV=2 51 453 8.0E-83
sp|P90522|ALG1_DICDI Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Dictyostelium discoideum GN=alg1 PE=2 SV=1 51 428 1.0E-80
sp|Q8L7M0|TUN_ARATH UDP-glycosyltransferase TURAN OS=Arabidopsis thaliana GN=TUN PE=2 SV=1 53 451 3.0E-77
sp|Q59Q79|ALG1_CANAL Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ALG1 PE=3 SV=1 42 457 1.0E-74
sp|Q6BS98|ALG1_DEBHA Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ALG1 PE=3 SV=2 51 449 3.0E-74
sp|Q6C3K2|ALG1_YARLI Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ALG1 PE=3 SV=1 53 445 7.0E-73
sp|P16661|ALG1_YEAST Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALG1 PE=1 SV=1 51 449 1.0E-67
sp|Q6FLZ2|ALG1_CANGA Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ALG1 PE=3 SV=1 38 449 2.0E-64
sp|Q6CVU2|ALG1_KLULA Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ALG1 PE=3 SV=1 51 449 4.0E-60
sp|Q75BA5|ALG1_ASHGO Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ALG1 PE=3 SV=2 51 449 4.0E-54
sp|C9J202|AG1L2_HUMAN Putative glycosyltransferase ALG1L2 OS=Homo sapiens GN=ALG1L2 PE=3 SV=1 233 429 6.0E-20
sp|Q6GMV1|ALG1L_HUMAN Putative glycosyltransferase ALG1-like OS=Homo sapiens GN=ALG1L PE=2 SV=2 360 457 2.0E-14
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 42.66 22.62 62.70
CcL In ants, during behavior modification 62.24 33.43 91.04
CcD In ants, recently dead 57.80 31.65 83.95

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.102144 no
SC16a CcD 0.195474 no
CcL CcD 0.784529 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5267
MAPYSLSMAPLLASVLAGALFTFALGYALGLLSRLGRLVPSRYRADAPPHVQILVLGDIGRSPRMQYHALSVAKH
GYNVDLVAYKETARHPDLIANARVSMYALAPQPECIAWSTLPFFLNLPAKVVHQFYTLFYTLMYRTPPARCILIQ
NPPSIPTFHVALLVALLRGSRLVVDWHNYGYSILAQKPLYRPLVPLYRWYELGLGRFLGHANLAVTDAMARQLRY
RLRGPVHTLHDRPAETFRPVPSPEHRLAFLSTLPETKNLARDIVDGNVRLLVSSTSWTPDEDFGMLLDALESYAN
PDAESTAEPPSPILAIITGKGPEREAYLERIKRLHDGGRLPGTRILTAWLSTRDYASLLASADLGVSLHKSSSGV
DLPMKVVDMFGAGLPVAAYSAFESFGELVREGDNGCGFETSEQLADILRRLLSAAGQRELAALKQGAIREGALRR
FDEDIKQEEQEAEPPRRHP
Coding >Ophio5|5267
ATGGCGCCTTATTCCCTGTCCATGGCGCCGCTCCTCGCCTCCGTCCTCGCCGGCGCCCTCTTCACCTTCGCCCTC
GGCTACGCCCTCGGCCTGCTTTCCCGCCTTGGCCGCCTCGTCCCATCGCGCTACCGCGCCGACGCGCCCCCCCAT
GTCCAGATCCTCGTCCTCGGCGACATCGGCCGCAGTCCGCGCATGCAGTATCACGCCCTCAGCGTCGCCAAGCAT
GGCTACAACGTCGACTTGGTCGCCTACAAGGAGACGGCCAGGCATCCGGACCTCATCGCCAATGCCCGCGTCTCA
ATGTACGCCCTCGCGCCCCAGCCCGAATGCATCGCTTGGAGCACCCTGCCCTTCTTCCTCAACCTTCCGGCAAAG
GTTGTCCACCAGTTCTACACCCTCTTCTACACCCTCATGTATCGCACGCCGCCCGCCCGCTGTATCCTCATCCAG
AATCCGCCGTCCATCCCCACCTTCCACGTCGCCCTCCTCGTCGCCCTGCTCCGCGGCAGCAGGCTCGTCGTCGAC
TGGCACAACTACGGCTACTCCATCCTCGCCCAGAAGCCCCTCTATAGGCCTTTGGTCCCGCTCTACCGTTGGTAC
GAGCTGGGACTTGGCCGCTTTCTGGGCCATGCGAACCTCGCCGTCACCGACGCCATGGCGCGCCAGCTGCGCTAC
CGCCTGAGGGGGCCCGTCCACACATTACACGATCGCCCCGCCGAGACCTTCCGGCCCGTGCCGTCGCCCGAGCAC
CGCCTGGCCTTTTTGTCCACGTTGCCCGAGACCAAGAATCTGGCGCGGGATATCGTCGACGGCAACGTGCGTCTC
CTCGTCAGCAGCACGTCCTGGACTCCCGACGAGGACTTTGGCATGCTGCTCGACGCCCTCGAGTCCTACGCCAAC
CCCGATGCCGAGTCGACGGCCGAGCCCCCTTCGCCCATCCTGGCCATCATCACGGGCAAGGGACCGGAGCGGGAG
GCCTACCTCGAGCGCATCAAGCGCCTGCACGACGGCGGCCGGCTACCCGGCACCCGCATCCTGACGGCCTGGCTG
TCCACGCGCGATTACGCATCGCTGCTCGCCTCGGCCGACCTGGGCGTCTCCCTGCACAAGTCCAGCTCGGGCGTC
GACCTGCCCATGAAGGTCGTCGACATGTTCGGCGCCGGCCTCCCGGTGGCCGCCTACTCGGCCTTTGAGAGTTTC
GGCGAGCTGGTCAGGGAGGGCGACAACGGTTGCGGCTTCGAGACATCGGAACAGCTGGCCGACATCCTCAGGAGG
CTGTTGAGCGCGGCGGGCCAACGGGAGCTGGCCGCGCTGAAGCAGGGTGCCATCAGGGAGGGAGCCCTGCGTCGA
TTTGACGAAGATATCAAACAAGAGGAACAAGAGGCGGAGCCTCCCAGACGCCACCCA
Transcript >Ophio5|5267
ATGGCGCCTTATTCCCTGTCCATGGCGCCGCTCCTCGCCTCCGTCCTCGCCGGCGCCCTCTTCACCTTCGCCCTC
GGCTACGCCCTCGGCCTGCTTTCCCGCCTTGGCCGCCTCGTCCCATCGCGCTACCGCGCCGACGCGCCCCCCCAT
GTCCAGATCCTCGTCCTCGGCGACATCGGCCGCAGTCCGCGCATGCAGTATCACGCCCTCAGCGTCGCCAAGCAT
GGCTACAACGTCGACTTGGTCGCCTACAAGGAGACGGCCAGGCATCCGGACCTCATCGCCAATGCCCGCGTCTCA
ATGTACGCCCTCGCGCCCCAGCCCGAATGCATCGCTTGGAGCACCCTGCCCTTCTTCCTCAACCTTCCGGCAAAG
GTTGTCCACCAGTTCTACACCCTCTTCTACACCCTCATGTATCGCACGCCGCCCGCCCGCTGTATCCTCATCCAG
AATCCGCCGTCCATCCCCACCTTCCACGTCGCCCTCCTCGTCGCCCTGCTCCGCGGCAGCAGGCTCGTCGTCGAC
TGGCACAACTACGGCTACTCCATCCTCGCCCAGAAGCCCCTCTATAGGCCTTTGGTCCCGCTCTACCGTTGGTAC
GAGCTGGGACTTGGCCGCTTTCTGGGCCATGCGAACCTCGCCGTCACCGACGCCATGGCGCGCCAGCTGCGCTAC
CGCCTGAGGGGGCCCGTCCACACATTACACGATCGCCCCGCCGAGACCTTCCGGCCCGTGCCGTCGCCCGAGCAC
CGCCTGGCCTTTTTGTCCACGTTGCCCGAGACCAAGAATCTGGCGCGGGATATCGTCGACGGCAACGTGCGTCTC
CTCGTCAGCAGCACGTCCTGGACTCCCGACGAGGACTTTGGCATGCTGCTCGACGCCCTCGAGTCCTACGCCAAC
CCCGATGCCGAGTCGACGGCCGAGCCCCCTTCGCCCATCCTGGCCATCATCACGGGCAAGGGACCGGAGCGGGAG
GCCTACCTCGAGCGCATCAAGCGCCTGCACGACGGCGGCCGGCTACCCGGCACCCGCATCCTGACGGCCTGGCTG
TCCACGCGCGATTACGCATCGCTGCTCGCCTCGGCCGACCTGGGCGTCTCCCTGCACAAGTCCAGCTCGGGCGTC
GACCTGCCCATGAAGGTCGTCGACATGTTCGGCGCCGGCCTCCCGGTGGCCGCCTACTCGGCCTTTGAGAGTTTC
GGCGAGCTGGTCAGGGAGGGCGACAACGGTTGCGGCTTCGAGACATCGGAACAGCTGGCCGACATCCTCAGGAGG
CTGTTGAGCGCGGCGGGCCAACGGGAGCTGGCCGCGCTGAAGCAGGGTGCCATCAGGGAGGGAGCCCTGCGTCGA
TTTGACGAAGATATCAAACAAGAGGAACAAGAGGCGGAGCCTCCCAGACGCCACCCATGA
Gene >Ophio5|5267
ATGGCGCCTTATTCCCTGTCCATGGCGCCGCTCCTCGCCTCCGTCCTCGCCGGCGCCCTCTTCACCTTCGCCCTC
GGCTACGCCCTCGGCCTGCTTTCCCGCCTTGGCCGCCTCGTCCCATCGCGCTACCGCGCCGACGCGCCCCCCCAT
GTCCAGATCCTCGTCCTCGGCGACATCGGCCGCAGTCCGCGCATGCAGTATCACGCCCTCAGCGTCGCCAAGCAT
GGCTACAACGTCGACTTGGTCGCCTACAAGGGTGAGTCGACCAACTCGAAGCCGCTTCCTCGCGCCGACTCGTCC
CAGAGACGGCCAGGCATCCGGACCTCATCGCCAATGCCCGCGTCTCAATGTACGCCCTCGCGCCCCAGCCCGAAT
GCATCGCTTGGAGCACCCTGCCCTTCTTCCTCAACCTTCCGGCAAAGGTTGTCCACCAGTTCTACACCCTCTTCT
ACACCCTCATGTATCGCACGCCGCCCGCCCGCTGTATCCTCATCCAGGTCAGAGCCCGCCCTCTCGTCCTCTTGT
CCGTCCAACTCCTCACACACACACACGCCTGCAGAATCCGCCGTCCATCCCCACCTTCCACGTCGCCCTCCTCGT
CGCCCTGCTCCGCGGCAGCAGGCTCGTCGTCGACTGGCACAACTACGGCTACTCCATCCTCGCCCAGAAGCCCCT
CTATAGGCCTTTGGTCCCGCTCTACCGTTGGTACGAGCTGGGACTTGGCCGCTTTCTGGGCCATGCGAACCTCGC
CGTCACCGACGCCATGGCGCGCCAGCTGCGCTACCGCCTGAGGGGGCCCGTCCACACATTACACGATCGCCCCGC
CGAGACCTTCCGGCCCGTGCCGTCGCCCGAGCACCGCCTGGCCTTTTTGTCCACGTTGCCCGAGACCAAGAATCT
GGCGCGGGATATCGTCGACGGCAACGTGCGTCTCCTCGTCAGCAGCACGTCCTGGACTCCCGACGAGGACTTTGG
CATGCTGCTCGACGCCCTCGAGTCCTACGCCAACCCCGATGCCGAGTCGACGGCCGAGCCCCCTTCGCCCATCCT
GGCCATCATCACGGGCAAGGGACCGGAGCGGGAGGCCTACCTCGAGCGCATCAAGCGCCTGCACGACGGCGGCCG
GCTACCCGGCACCCGCATCCTGACGGCCTGGCTGTCCACGCGCGATTACGCATCGCTGCTCGCCTCGGCCGACCT
GGGCGTCTCCCTGCACAAGTCCAGCTCGGGCGTCGACCTGCCCATGAAGGTCGTCGACATGTTCGGCGCCGGCCT
CCCGGTGGCCGCCTACTCGGCCTTTGAGAGTTTCGGCGAGCTGGTCAGGGAGGGCGACAACGGTTGCGGCTTCGA
GACATCGGAACAGCTGGCCGACATCCTCAGGAGGCTGTTGAGCGCGGCGGGCCAACGGGAGCTGGCCGCGCTGAA
GCAGGGTGCCATCAGGGAGGGAGCCCTGCGGTGGGACGACGAGTGGGATCGCGTTGTCGCGCCCTTGATGGAGTC
GATTTGACGGTCAGATCAGTCGCTACTCGATGGCGAAGAGGAGTCGAATGATGAACTGAAAAGAGCAGCAGAAGA
TATCAAACAAGAGGAACAAGAGGCGGAGCCTCCCAGACGCCACCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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