Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5252
Gene name
Locationscaffold_425:2737..4099
Strand-
Gene length (bp)1362
Transcript length (bp)1161
Coding sequence length (bp)1158
Protein length (aa) 386

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5252
MRCYTGLWIAAALRLASAQGNATVTPPSASSVAAYGPPPVQSSPSSQYQAPASPSSRPAASPSSRPAASPSTRPA
ASPSTRPPASPSTRPPASPSTRPPASSTSQSSPAPQYLPPVGSSSSPPASSRPPSIQQEPPENACQCCQSSTFTS
TVFTTLYNTTTVSVTVTERQTSTVVARTTDFVTTTTTSTFVTVLASGDCYYDEELRAKVVSFADRRGWRVLRNRD
HNKMGNNYSYATRDDYPAVGNHSDGGCAHRIRRSDYLSGPADSHASAGLVNDRLAVDDLHGNDDFLHRASRHCHV
GSHSHYHGSKDGTCHDCGDVDLELSGGDRGYQVDHSDGHGHGDRTRPGDDCHGSRPGNDCDPSGRDENVARADRD
PSRLGRAVNTH
Coding >Ophio5|5252
ATGCGTTGCTACACGGGTCTTTGGATCGCCGCCGCTCTGCGACTGGCGTCTGCACAGGGGAATGCCACTGTCACG
CCGCCGTCTGCCAGTTCGGTTGCGGCTTATGGACCGCCGCCGGTTCAATCCTCTCCCAGCTCTCAGTATCAGGCG
CCCGCCAGTCCTTCTTCTCGGCCTGCCGCTAGTCCTTCTTCTCGGCCTGCCGCCAGTCCTTCGACTCGGCCTGCC
GCCAGTCCTTCGACTCGGCCTCCCGCCAGTCCTTCGACTCGGCCTCCCGCCAGTCCTTCGACTCGACCTCCCGCT
AGCTCTACCTCTCAGTCTTCCCCTGCCCCCCAGTATCTACCTCCCGTCGGCTCGTCGAGTAGTCCTCCCGCCTCG
TCTCGACCGCCGTCCATCCAGCAAGAACCGCCTGAAAATGCGTGCCAATGTTGCCAGTCCAGCACTTTCACCAGC
ACCGTCTTTACGACGCTCTATAACACGACGACGGTCTCGGTCACGGTCACTGAGCGCCAAACTTCCACTGTGGTT
GCGCGCACGACCGACTTTGTGACGACGACGACCACCTCGACGTTTGTGACGGTGCTCGCGTCCGGTGACTGTTAC
TACGACGAGGAATTGCGTGCCAAGGTCGTCTCCTTCGCCGACCGGCGAGGGTGGCGTGTACTGCGAAACCGTGAC
CACAACAAGATGGGAAACAACTACAGCTACGCAACCCGTGACGATTACCCGGCCGTTGGGAACCACTCAGACGGT
GGTTGTGCCCACCGTATCCGTCGTTCCGACTACCTATCAGGACCGGCAGACAGTCACGCGAGTGCAGGTCTCGTC
AACGACCGTTTGGCGGTCGACGACTTACACGGCAACGACGACTTTCTCCACCGAGCGTCCCGTCACTGTCACGTC
GGATCACACAGTCATTACCACGGCAGTAAGGACGGAACTTGTCACGACTGTGGCGACGTTGACCTCGAGCTATCC
GGTGGTGACCGAGGTTACCAGGTTGATCACTCAGACGGCCACGGCCACGGTGACCGCACAAGGCCAGGCGACGAC
TGTCACGGCTCCCGGCCAGGTAACGACTGTGACCCGTCAGGCAGAGACGAGAACGTTGCCCGAGCGGACCGTGAC
CCTTCCCGGCTCGGTCGTGCTGTCAACACTCAC
Transcript >Ophio5|5252
ATGCGTTGCTACACGGGTCTTTGGATCGCCGCCGCTCTGCGACTGGCGTCTGCACAGGGGAATGCCACTGTCACG
CCGCCGTCTGCCAGTTCGGTTGCGGCTTATGGACCGCCGCCGGTTCAATCCTCTCCCAGCTCTCAGTATCAGGCG
CCCGCCAGTCCTTCTTCTCGGCCTGCCGCTAGTCCTTCTTCTCGGCCTGCCGCCAGTCCTTCGACTCGGCCTGCC
GCCAGTCCTTCGACTCGGCCTCCCGCCAGTCCTTCGACTCGGCCTCCCGCCAGTCCTTCGACTCGACCTCCCGCT
AGCTCTACCTCTCAGTCTTCCCCTGCCCCCCAGTATCTACCTCCCGTCGGCTCGTCGAGTAGTCCTCCCGCCTCG
TCTCGACCGCCGTCCATCCAGCAAGAACCGCCTGAAAATGCGTGCCAATGTTGCCAGTCCAGCACTTTCACCAGC
ACCGTCTTTACGACGCTCTATAACACGACGACGGTCTCGGTCACGGTCACTGAGCGCCAAACTTCCACTGTGGTT
GCGCGCACGACCGACTTTGTGACGACGACGACCACCTCGACGTTTGTGACGGTGCTCGCGTCCGGTGACTGTTAC
TACGACGAGGAATTGCGTGCCAAGGTCGTCTCCTTCGCCGACCGGCGAGGGTGGCGTGTACTGCGAAACCGTGAC
CACAACAAGATGGGAAACAACTACAGCTACGCAACCCGTGACGATTACCCGGCCGTTGGGAACCACTCAGACGGT
GGTTGTGCCCACCGTATCCGTCGTTCCGACTACCTATCAGGACCGGCAGACAGTCACGCGAGTGCAGGTCTCGTC
AACGACCGTTTGGCGGTCGACGACTTACACGGCAACGACGACTTTCTCCACCGAGCGTCCCGTCACTGTCACGTC
GGATCACACAGTCATTACCACGGCAGTAAGGACGGAACTTGTCACGACTGTGGCGACGTTGACCTCGAGCTATCC
GGTGGTGACCGAGGTTACCAGGTTGATCACTCAGACGGCCACGGCCACGGTGACCGCACAAGGCCAGGCGACGAC
TGTCACGGCTCCCGGCCAGGTAACGACTGTGACCCGTCAGGCAGAGACGAGAACGTTGCCCGAGCGGACCGTGAC
CCTTCCCGGCTCGGTCGTGCTGTCAACACTCACTAG
Gene >Ophio5|5252
ATGCGTTGCTACACGGGTCTTTGGATCGCCGCCGCTCTGCGACTGGCGTCTGCACAGGGGAATGCCACTGTCACG
CCGCCGTCTGCCAGTTCGGTTGCGGCTTATGGACCGCCGCCGGTTCAATCCTCTCCCAGCTCTCAGTATCAGGCG
CCCGCCAGTCCTTCTTCTCGGCCTGCCGCTAGTCCTTCTTCTCGGCCTGCCGCCAGTCCTTCGACTCGGCCTGCC
GCCAGTCCTTCGACTCGGCCTCCCGCCAGTCCTTCGACTCGGCCTCCCGCCAGTCCTTCGACTCGACCTCCCGCT
AGCTCTACCTCTCAGTCTTCCCCTGCCCCCCAGTATCTACCTCCCGTCGGCTCGTCGAGTAGTCCTCCCGCCTCG
TCTCGACCGCCGTCCATCCAGCAAGAACCGCCTGAAAATGCGTGCCAATGTTGCCAGTCCAGCACTTTCACCAGC
ACCGTCTTGTAAGTGCGACTGCTATCCAGCCCGGGGTCGGGGGTTAACATGCGCAGTACGACGCTCTATAACACG
ACGACGGTAAGTTGCGCAGATCAGCATGGTGGACAATGTTCTGATTGACGTGTAGGTCTCGGTCACGGTCACTGA
GCGCCAAACTTCCACTGTGGTTGCGCGCACGACCGACTTTGTGACGACGACGACCACCTCGACGTTTGTGACGGT
GCGTGGCTGCTTATAATGCCCAACGTTGAACTCGCTGGCTGACCTCGACTAGTCGCGTCCGGTGACTGTTACTAC
GACGAGGAAGTGAGTGATGGTCATTTTGCATGTATGATTTCTCTCGCCGCTGACGTGCCGTAGTTGCGTGCCAAG
GTCGTCTCCTTCGCCGACCGGCGAGGGTGGCGTGTACTGCGAAACCGTGACCACAACAAGATGGGAAACAACTAC
AGCTACGCAACCCGTGACGATTACCCGGCCGTTGGGAACCACTCAGACGGTGGTTGTGCCCACCGTATCCGTCGT
TCCGACTACCTATCAGGACCGGCAGACAGTCACGCGAGTGCAGGTCTCGTCAACGACCGTTTGGCGGTCGACGAC
TTACACGGCAACGACGACTTTCTCCACCGAGCGTCCCGTCACTGTCACGTCGGATCACACAGTCATTACCACGGC
AGTAAGGACGGAACTTGTCACGACTGTGGCGACGTTGACCTCGAGCTATCCGGTGGTGACCGAGGTTACCAGGTT
GATCACTCAGACGGCCACGGCCACGGTGACCGCACAAGGCCAGGCGACGACTGTCACGGCTCCCGGCCAGGTAAC
GACTGTGACCCGTCAGGCAGAGACGAGAACGTTGCCCGAGCGGACCGTGACCCTTCCCGGCTCGGTCGTGCTGTC
AACACTCACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail