Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|5246
Gene name
Location	scaffold_424:2169..4500
Strand	+
Gene length (bp)	2331
Transcript length (bp)	2277
Coding sequence length (bp)	2274
Protein length (aa)	758

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06011	TRP	Transient receptor potential (TRP) ion channel	2.4E-163	169	619
PF14558	TRP_N	ML-like domain	3.4E-42	28	164

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q08967\|FLC1_YEAST	Flavin carrier protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC1 PE=1 SV=1	18	736	3.0E-145
sp\|P53121\|FLC3_YEAST	Putative flavin carrier protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC3 PE=1 SV=1	15	746	4.0E-139
sp\|P39719\|FLC2_YEAST	Flavin carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC2 PE=1 SV=2	23	725	3.0E-137
sp\|Q08844\|YO365_YEAST	Uncharacterized membrane protein YOR365C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR365C PE=1 SV=1	25	622	5.0E-110
sp\|Q09917\|PKD2_SCHPO	TRP-like ion channel pkd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkd2 PE=1 SV=1	4	617	4.0E-103

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q08967\|FLC1_YEAST	Flavin carrier protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC1 PE=1 SV=1	18	736	3.0E-145
sp\|P53121\|FLC3_YEAST	Putative flavin carrier protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC3 PE=1 SV=1	15	746	4.0E-139
sp\|P39719\|FLC2_YEAST	Flavin carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC2 PE=1 SV=2	23	725	3.0E-137
sp\|Q08844\|YO365_YEAST	Uncharacterized membrane protein YOR365C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR365C PE=1 SV=1	25	622	5.0E-110
sp\|Q09917\|PKD2_SCHPO	TRP-like ion channel pkd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkd2 PE=1 SV=1	4	617	4.0E-103
sp\|O74520\|YCPE_SCHPO	Uncharacterized membrane protein C663.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.14c PE=3 SV=2	13	557	8.0E-27

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 25	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	343	365	22
2	386	408	22
3	423	445	22
4	481	503	22
5	508	530	22
6	539	561	22
7	571	593	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|5246 MRSLLRAPLLVVASMATLLSPVAGERLLMSSSLNTCQQDSSFSASLFNVVYTPNNNSASINMVATSSVQGKVIFD LAISAYGYQFIRMTLNPCDMNLAGLCPMVAGKIPFGFNLPVGKDAAQRIPAIAYNIPDLDATVRVYVNLTATGES VACVEADISNGKTVDLIGVKWATAIIAGLALMASAVVNGLGHSNTAAHVAANSLSLFGYFQAQAIVGLTSVPLPP IVQSWTQDFQWSMGIIRVGFMQDIFTWYQRATGGTPSTIFDSLTTVSVQVAKRSLEYADAGLSLFKRGAAMMPRA VTTAAHSLVRRNNITTGSGAYIVFGIQRVAFRSKIETTNLFMTGLTFFCIFVVLTVLAVAAFKGICELCVKNKWI DKDKFLDFRNGWLTVLKGILFRVALIGFPQMAILCLWEFTQVDSPAEVVLAVFFFFGMALTLAWGAAKVIRIARR SVAMHRNPAYILFSDPQALNKWGFLYIQFRASAYYFIAPVLGYTLIKAMFVAFAQRNGVAQAVGFVIVEAAALIA ASVLRPWMDKSTNSFNIAICVINFLNAIFLLIFSNVFGAPSLVVGAVGVILFVLNAAFSLILLIMVIVSTTVTFF RKNPDARYQVMADDRASFMKSQTQLTTTTELDALAATARGDKAGYKVHLDLDDDNESLASEDLRRRGGDPNGSHS SQASFHNAHNQQHAPSRSPVNPSMPLFPAGGQRPQSPFRSASPNSYSRSGSSLGQHRTQGNASPAGYRTQNSSSP WQRGAGYE
Coding	>Ophio5\|5246 ATGCGGTCGCTTCTGAGGGCGCCGCTTCTCGTCGTCGCCTCCATGGCGACGCTGCTGTCGCCTGTCGCCGGCGAG AGGCTGCTCATGTCCAGCTCCCTCAACACCTGCCAGCAGGACTCGAGCTTCTCCGCCTCCCTCTTCAACGTCGTC TATACGCCAAACAACAACTCGGCTAGCATTAACATGGTGGCCACGTCGTCGGTTCAGGGCAAGGTCATCTTCGAT CTGGCCATCTCGGCCTACGGCTACCAGTTCATCCGCATGACGCTCAATCCCTGCGACATGAATCTGGCCGGCCTG TGCCCCATGGTGGCTGGCAAGATCCCCTTCGGCTTCAACCTGCCCGTCGGCAAGGACGCGGCTCAGCGCATCCCC GCCATCGCCTACAACATCCCCGATCTCGACGCCACCGTCCGCGTCTACGTCAATCTGACGGCGACGGGCGAGAGC GTCGCCTGTGTCGAGGCAGACATCTCCAACGGCAAGACGGTCGACCTCATCGGCGTCAAGTGGGCTACGGCCATC ATAGCCGGCCTCGCTCTCATGGCCTCGGCCGTCGTCAACGGCCTCGGCCACTCCAACACAGCCGCTCACGTCGCC GCAAACTCCCTCTCTCTCTTCGGCTACTTCCAGGCTCAGGCCATCGTCGGTCTGACCAGCGTGCCCCTGCCGCCC ATCGTCCAGTCGTGGACCCAGGACTTCCAATGGTCCATGGGCATCATCCGCGTCGGCTTCATGCAGGACATCTTC ACCTGGTACCAGCGCGCCACGGGAGGCACGCCGTCGACCATCTTCGACTCCCTCACCACCGTCTCCGTCCAGGTG GCCAAGCGGTCGCTCGAGTACGCCGATGCGGGGCTCAGCCTCTTCAAGCGCGGGGCCGCCATGATGCCGCGCGCC GTCACCACGGCCGCCCACAGCCTCGTGCGTCGAAACAACATCACGACCGGCTCCGGCGCCTACATCGTCTTCGGC ATCCAGCGTGTCGCCTTCCGGTCCAAGATCGAGACGACCAACCTCTTCATGACGGGCCTCACCTTCTTCTGCATC TTCGTCGTCCTCACCGTCCTCGCCGTTGCCGCCTTCAAGGGCATCTGCGAGCTGTGCGTCAAGAACAAGTGGATC GACAAGGATAAGTTCCTCGACTTCCGCAACGGCTGGCTCACCGTCCTCAAGGGCATCCTCTTCCGCGTCGCCCTC ATCGGCTTCCCCCAGATGGCCATCCTCTGCCTCTGGGAGTTCACCCAGGTCGACTCGCCCGCCGAGGTCGTCCTC GCCGTCTTCTTCTTCTTCGGCATGGCCCTGACGCTGGCCTGGGGCGCCGCCAAGGTGATTCGCATCGCCCGCCGC TCCGTCGCCATGCACCGCAACCCGGCCTATATCCTCTTCTCCGACCCGCAGGCCCTCAACAAATGGGGCTTCCTC TATATCCAGTTCCGCGCCTCGGCCTACTACTTCATCGCCCCGGTCCTGGGCTACACGCTCATCAAGGCCATGTTC GTCGCCTTTGCCCAGCGCAACGGCGTGGCCCAGGCCGTCGGTTTCGTCATCGTCGAGGCGGCCGCCCTCATCGCC GCCTCGGTGCTGCGGCCGTGGATGGACAAGAGCACGAATTCGTTCAACATTGCCATTTGCGTCATCAACTTCCTC AACGCCATCTTCCTCCTCATCTTCTCCAATGTCTTTGGCGCCCCGAGTCTCGTCGTCGGCGCCGTCGGCGTCATC CTCTTCGTCCTCAACGCCGCCTTTTCGCTAATCCTGCTCATCATGGTCATCGTTTCCACCACCGTCACCTTCTTC CGCAAGAATCCGGACGCCCGGTACCAAGTCATGGCCGACGACCGCGCCTCGTTCATGAAGTCACAGACGCAGCTG ACGACGACGACGGAGCTCGACGCGCTGGCCGCCACCGCCCGCGGCGACAAGGCCGGCTACAAAGTTCACCTCGAT CTCGACGACGACAACGAGTCGCTGGCGTCGGAGGATCTGCGTCGCCGCGGGGGGGATCCCAACGGTTCGCACTCG TCGCAGGCCTCGTTCCACAACGCCCACAACCAGCAGCACGCGCCGTCGCGGTCCCCGGTGAATCCGTCCATGCCG CTGTTCCCGGCCGGCGGACAGCGGCCCCAGAGCCCGTTCCGATCAGCGTCGCCCAACAGCTACAGCCGGTCGGGG TCGTCGCTGGGACAGCACCGGACGCAAGGCAATGCGAGCCCTGCGGGATATCGCACGCAAAACTCGTCGAGTCCG TGGCAACGAGGTGCCGGCTACGAA
Transcript	>Ophio5\|5246 ATGCGGTCGCTTCTGAGGGCGCCGCTTCTCGTCGTCGCCTCCATGGCGACGCTGCTGTCGCCTGTCGCCGGCGAG AGGCTGCTCATGTCCAGCTCCCTCAACACCTGCCAGCAGGACTCGAGCTTCTCCGCCTCCCTCTTCAACGTCGTC TATACGCCAAACAACAACTCGGCTAGCATTAACATGGTGGCCACGTCGTCGGTTCAGGGCAAGGTCATCTTCGAT CTGGCCATCTCGGCCTACGGCTACCAGTTCATCCGCATGACGCTCAATCCCTGCGACATGAATCTGGCCGGCCTG TGCCCCATGGTGGCTGGCAAGATCCCCTTCGGCTTCAACCTGCCCGTCGGCAAGGACGCGGCTCAGCGCATCCCC GCCATCGCCTACAACATCCCCGATCTCGACGCCACCGTCCGCGTCTACGTCAATCTGACGGCGACGGGCGAGAGC GTCGCCTGTGTCGAGGCAGACATCTCCAACGGCAAGACGGTCGACCTCATCGGCGTCAAGTGGGCTACGGCCATC ATAGCCGGCCTCGCTCTCATGGCCTCGGCCGTCGTCAACGGCCTCGGCCACTCCAACACAGCCGCTCACGTCGCC GCAAACTCCCTCTCTCTCTTCGGCTACTTCCAGGCTCAGGCCATCGTCGGTCTGACCAGCGTGCCCCTGCCGCCC ATCGTCCAGTCGTGGACCCAGGACTTCCAATGGTCCATGGGCATCATCCGCGTCGGCTTCATGCAGGACATCTTC ACCTGGTACCAGCGCGCCACGGGAGGCACGCCGTCGACCATCTTCGACTCCCTCACCACCGTCTCCGTCCAGGTG GCCAAGCGGTCGCTCGAGTACGCCGATGCGGGGCTCAGCCTCTTCAAGCGCGGGGCCGCCATGATGCCGCGCGCC GTCACCACGGCCGCCCACAGCCTCGTGCGTCGAAACAACATCACGACCGGCTCCGGCGCCTACATCGTCTTCGGC ATCCAGCGTGTCGCCTTCCGGTCCAAGATCGAGACGACCAACCTCTTCATGACGGGCCTCACCTTCTTCTGCATC TTCGTCGTCCTCACCGTCCTCGCCGTTGCCGCCTTCAAGGGCATCTGCGAGCTGTGCGTCAAGAACAAGTGGATC GACAAGGATAAGTTCCTCGACTTCCGCAACGGCTGGCTCACCGTCCTCAAGGGCATCCTCTTCCGCGTCGCCCTC ATCGGCTTCCCCCAGATGGCCATCCTCTGCCTCTGGGAGTTCACCCAGGTCGACTCGCCCGCCGAGGTCGTCCTC GCCGTCTTCTTCTTCTTCGGCATGGCCCTGACGCTGGCCTGGGGCGCCGCCAAGGTGATTCGCATCGCCCGCCGC TCCGTCGCCATGCACCGCAACCCGGCCTATATCCTCTTCTCCGACCCGCAGGCCCTCAACAAATGGGGCTTCCTC TATATCCAGTTCCGCGCCTCGGCCTACTACTTCATCGCCCCGGTCCTGGGCTACACGCTCATCAAGGCCATGTTC GTCGCCTTTGCCCAGCGCAACGGCGTGGCCCAGGCCGTCGGTTTCGTCATCGTCGAGGCGGCCGCCCTCATCGCC GCCTCGGTGCTGCGGCCGTGGATGGACAAGAGCACGAATTCGTTCAACATTGCCATTTGCGTCATCAACTTCCTC AACGCCATCTTCCTCCTCATCTTCTCCAATGTCTTTGGCGCCCCGAGTCTCGTCGTCGGCGCCGTCGGCGTCATC CTCTTCGTCCTCAACGCCGCCTTTTCGCTAATCCTGCTCATCATGGTCATCGTTTCCACCACCGTCACCTTCTTC CGCAAGAATCCGGACGCCCGGTACCAAGTCATGGCCGACGACCGCGCCTCGTTCATGAAGTCACAGACGCAGCTG ACGACGACGACGGAGCTCGACGCGCTGGCCGCCACCGCCCGCGGCGACAAGGCCGGCTACAAAGTTCACCTCGAT CTCGACGACGACAACGAGTCGCTGGCGTCGGAGGATCTGCGTCGCCGCGGGGGGGATCCCAACGGTTCGCACTCG TCGCAGGCCTCGTTCCACAACGCCCACAACCAGCAGCACGCGCCGTCGCGGTCCCCGGTGAATCCGTCCATGCCG CTGTTCCCGGCCGGCGGACAGCGGCCCCAGAGCCCGTTCCGATCAGCGTCGCCCAACAGCTACAGCCGGTCGGGG TCGTCGCTGGGACAGCACCGGACGCAAGGCAATGCGAGCCCTGCGGGATATCGCACGCAAAACTCGTCGAGTCCG TGGCAACGAGGTGCCGGCTACGAATAA
Gene	>Ophio5\|5246 ATGCGGTCGCTTCTGAGGGCGCCGCTTCTCGTCGTCGCCTCCATGGCGACGCTGCTGTCGCCTGTCGCCGGCGAG AGGCTGCTCATGTCCAGCTCCCTCAACACCTGCCAGCAGGACTCGAGCTTCTCCGCCTCCCTCTTCAACGTCGTC TATACGCCAAACAACAACTCGGCTAGCATTAACATGGTGGCCACGTCGTCGGTTCAGGGCAAGGTCATCTTCGAT CTGGCCATCTCGGCCTACGGCTACCAGTTCATCCGCATGACGCTCAATCCCTGCGACATGAATCTGGCCGGCCTG TGCCCCATGGTGGCTGGCAAGATCCCCTTCGGCTTCAACCTGCCCGTCGGCAAGGACGCGGCTCAGCGCATCCCC GCCATCGCCTACAACATCCCCGATCTCGACGCCACCGTCCGCGTCTACGTCAATCTGACGGCGACGGGCGAGAGC GTCGCCTGTGTCGAGGCAGACATCTCCAACGGCAAGACGGTCGACCTCATCGGCGTCAAGTGGGCTACGGCCATC ATAGCCGGCCTCGCTCTCATGGCCTCGGCCGTCGTCAACGGCCTCGGCCACTCCAACACAGCCGCTCACGTCGCC GCAAACTCCCTCTCTCTCTTCGGCTACTTCCAGGCTCAGGCCATCGTCGGTCTGACCAGCGTGCCCCTGCCGCCC ATCGTCCAGTCGTGGACCCAGGACTTCCAATGGTCCATGGGCATCATCCGCGTCGGCTTCATGCAGGACATCTTC ACCTGGTACCAGCGCGCCACGGGAGGCACGCCGTCGACCATCTTCGACTCCCTCACCACCGTCTCCGTCCAGGTG GCCAAGCGGTCGCTCGAGTACGCCGATGCGGGGCTCAGCCTCTTCAAGCGCGGGGCCGCCATGATGCCGCGCGCC GTCACCACGGCCGCCCACAGCCTCGTGCGTCGAAACAACATCACGACCGGCTCCGGCGCCTACATCGTCTTCGGC ATCCAGCGTGTCGCCTTCCGGTCCAAGATCGAGACGACCAACCTCTTCATGACGGGCCTCACCTTCTTCTGCATC TTCGTCGTCCTCACCGTCCTCGCCGTTGCCGCCTTCAAGGGCATCTGCGAGCTGTGCGTCAAGAACAAGTGGATC GACAAGGATAAGTTCCTCGACTTCCGCAACGGCTGGCTCACCGTCCTCAAGGGCATCCTCTTCCGCGTCGCCCTC ATCGGCTTCCCCCAGATGGCCATCCTCTGCCTCTGGGAGTTCACCCAGGTCGACTCGCCCGCCGAGGTCGTCCTC GCCGTCTTCTTCTTCTTCGGCATGGCCCTGACGCTGGCCTGGGGCGCCGCCAAGGTGATTCGCATCGCCCGCCGC TCCGTCGCCATGCACCGCAACCCGGCCTATATCCTCTTCTCCGACCCGCAGGCCCTCAACAAATGGGGCTTCCTC TATATCCAGTTCCGCGCCTCGGCCTACTACTTCATCGCCCCGGTCCTGGGCTACACGCTCATCAAGGCCATGTTC GTCGCCTTTGCCCAGCGCAACGGCGTGGCCCAGGCCGTCGGTTTCGTCATCGTCGAGGCGGCCGCCCTCATCGCC GCCTCGGTGCTGCGGCCGTGGATGGACAAGAGCACGAATTCGTTCAACATTGCCATTTGCGTCATCAACTTCCTC AACGCCATCTTCCTCCTCATCTTCTCCAATGTCTTTGGCGCCCCGAGTCTCGTCGTCGGCGCCGTCGGCGTCATC CTCTTCGTCCTCAACGCCGCCTTTTCGCTAATCCTGCTCATCATGGTCATCGTTTCCACCACCGTCACCTTCTTC CGCAAGAATCCGGACGCCCGGTACCAAGTCATGGCCGACGACCGCGCCTCGTTCATGAAGTCACAGACGCAGCTG ACGACGACGACGGAGCTCGACGCGCTGGCCGCCACCGCCCGCGGCGACAAGGCCGGCTACAAAGTTCACCTCGAT CTCGACGACGACAACGAGTCGCTGGCGTCGGAGGATCTGCGTCGCCGCGGGGGGGATCCCAACGGTTCGCACTCG TCGCAGGCCTCGTTCCACAACGCCCACAACCAGCAGCACGCGCCGTCGCGGTCCCCGGTGAATCCGTCCATGCCG CTGTTCCCGGCCGGCGGACAGCGGCCCCAGAGCCCGTTCCGATCAGCGTCGCCCAACAGCTACAGCCGGTCGGGG TCGTCGCTGGGACAGCACCGGACGCAAGGCAATGCGAGCCCTGCGGGATATCGCACGCAAAACTCGTCGAGGTAG TTGTGTCTGCTTTTCGTGTGTTACTGTCCCCAGCTAATTGATGTCCACAGTCCGTGGCAACGAGGTGCCGGCTAC GAATAA

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