© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5240 |
| Gene name | |
| Location | scaffold_423:5337..7013 |
| Strand | + |
| Gene length (bp) | 1676 |
| Transcript length (bp) | 1551 |
| Coding sequence length (bp) | 1548 |
| Protein length (aa) | 516 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09949 | APP1_cat | Phosphatidate phosphatase APP1, catalytic domain | 1.8E-35 | 273 | 418 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008195 | phosphatidate phosphatase activity | Yes |
| GO:0016791 | phosphatase activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0042578 | phosphoric ester hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | 0.0872 | 0.0479 | 0.7871 | 0.4555 | 0.0928 | 0.0102 | 0.2681 | 0.311 | 0.2153 | 0.0111 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 29 | 0.893478 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 492 | 514 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 6030 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5240 MLRFVASASVLAVVASSGPVSTPSSTPIPSATESIATPTPTPTLKIEARGLKDIQSYVSSLAAGGASKISSFVQS GILDFPLGFPTGTNVEKSASVSASAVEAQPTEVLNLPPYANWTDEGWNVRVHGNVFKTPNISQDKIDTLANAFLI GVDVDQLQPPEQAQARNLTRSIFIFQQGDKSVTMDFVNDVAVRPNASGGAVNADGGAQTIPLPFNTTAQGDFDVF VKLKNTTSPSGRGLIAGNETSRIQTLNLYAQGTDTGNATAYLVPPQGVTIISDIDDILRVTKIYQPKEGLLNTFA RPFEAWMNMPQIYANWSSSIPNMHFHYLTTTPEQGSRLYMDFIYKTYPLGSFDTRPLNFSDLKATLSIRKFLLDK VFQTFPQRKFILVADTSNRDVMKDYPQMYKDHPEQVLCILLRNTSATDPSDRFPYDTSGFRDIPQEHYMFFTVPD DLAGLNVLGSQCLNQSVRQNVTFRTQGLPSWLSVDESNARRARGAVGIAVGAWLAALATTVFLGML |
| Coding | >Ophio5|5240 ATGCTGCGGTTTGTCGCCTCGGCGTCGGTGCTCGCCGTCGTTGCGTCGTCCGGCCCGGTGTCGACGCCCTCCTCA ACTCCGATTCCCTCGGCGACCGAGTCGATAGCGACGCCGACGCCGACGCCGACTCTCAAGATTGAGGCACGCGGC CTCAAGGACATCCAGAGCTACGTGTCGAGCCTGGCGGCCGGTGGGGCCAGTAAAATCTCTTCCTTTGTCCAGTCG GGCATCCTCGACTTTCCCTTGGGCTTTCCTACCGGCACCAATGTGGAGAAATCTGCCAGCGTTTCGGCATCTGCC GTCGAAGCGCAGCCGACCGAGGTGTTGAATCTACCCCCGTATGCCAACTGGACCGACGAGGGCTGGAACGTGCGC GTTCATGGCAACGTATTCAAGACGCCGAACATCTCGCAGGATAAGATTGACACGCTCGCCAATGCCTTCCTGATC GGAGTCGACGTCGACCAGCTGCAGCCGCCTGAGCAGGCTCAAGCCAGGAACTTGACGCGTTCCATCTTCATCTTT CAGCAGGGCGACAAGAGCGTCACCATGGACTTTGTCAACGACGTGGCTGTGCGGCCAAACGCGTCTGGGGGTGCT GTCAACGCTGACGGCGGCGCGCAGACGATCCCATTGCCTTTTAACACGACGGCTCAGGGCGACTTCGACGTCTTC GTCAAGCTGAAGAACACGACGAGTCCCAGCGGCCGAGGCCTGATAGCAGGCAACGAAACGTCGCGCATACAGACT CTCAACCTGTACGCCCAGGGCACCGACACCGGCAACGCAACGGCATACCTCGTCCCTCCACAGGGCGTCACCATC ATCTCCGACATCGACGACATCCTGCGCGTCACCAAAATCTATCAACCAAAAGAAGGCCTCCTTAACACGTTCGCG CGGCCCTTTGAAGCGTGGATGAACATGCCGCAGATATACGCCAACTGGTCGTCCTCGATCCCAAACATGCACTTC CACTACCTGACGACGACACCCGAGCAAGGGTCGCGCCTCTACATGGACTTCATCTACAAGACTTATCCTCTAGGT TCCTTTGATACGCGGCCGCTCAACTTCTCTGACCTGAAAGCGACGCTATCGATTCGCAAGTTTCTGCTCGACAAG GTGTTCCAGACCTTTCCGCAGCGCAAGTTCATTCTCGTCGCCGACACGTCCAACCGCGACGTCATGAAGGACTAT CCACAGATGTACAAGGACCATCCCGAGCAGGTGCTGTGCATCTTGTTACGGAACACGAGCGCGACGGACCCGTCG GACAGGTTTCCCTACGACACGTCGGGCTTCCGCGACATCCCGCAAGAGCATTACATGTTCTTTACCGTGCCGGAC GACCTCGCCGGGTTGAATGTGCTTGGCTCCCAATGTCTCAACCAGTCGGTGCGGCAGAATGTCACCTTTCGGACG CAGGGCCTGCCCTCTTGGCTGAGCGTCGATGAGAGCAACGCACGGCGGGCGAGGGGGGCGGTTGGCATCGCGGTT GGGGCCTGGCTGGCGGCTTTGGCGACGACGGTGTTTTTGGGGATGCTG |
| Transcript | >Ophio5|5240 ATGCTGCGGTTTGTCGCCTCGGCGTCGGTGCTCGCCGTCGTTGCGTCGTCCGGCCCGGTGTCGACGCCCTCCTCA ACTCCGATTCCCTCGGCGACCGAGTCGATAGCGACGCCGACGCCGACGCCGACTCTCAAGATTGAGGCACGCGGC CTCAAGGACATCCAGAGCTACGTGTCGAGCCTGGCGGCCGGTGGGGCCAGTAAAATCTCTTCCTTTGTCCAGTCG GGCATCCTCGACTTTCCCTTGGGCTTTCCTACCGGCACCAATGTGGAGAAATCTGCCAGCGTTTCGGCATCTGCC GTCGAAGCGCAGCCGACCGAGGTGTTGAATCTACCCCCGTATGCCAACTGGACCGACGAGGGCTGGAACGTGCGC GTTCATGGCAACGTATTCAAGACGCCGAACATCTCGCAGGATAAGATTGACACGCTCGCCAATGCCTTCCTGATC GGAGTCGACGTCGACCAGCTGCAGCCGCCTGAGCAGGCTCAAGCCAGGAACTTGACGCGTTCCATCTTCATCTTT CAGCAGGGCGACAAGAGCGTCACCATGGACTTTGTCAACGACGTGGCTGTGCGGCCAAACGCGTCTGGGGGTGCT GTCAACGCTGACGGCGGCGCGCAGACGATCCCATTGCCTTTTAACACGACGGCTCAGGGCGACTTCGACGTCTTC GTCAAGCTGAAGAACACGACGAGTCCCAGCGGCCGAGGCCTGATAGCAGGCAACGAAACGTCGCGCATACAGACT CTCAACCTGTACGCCCAGGGCACCGACACCGGCAACGCAACGGCATACCTCGTCCCTCCACAGGGCGTCACCATC ATCTCCGACATCGACGACATCCTGCGCGTCACCAAAATCTATCAACCAAAAGAAGGCCTCCTTAACACGTTCGCG CGGCCCTTTGAAGCGTGGATGAACATGCCGCAGATATACGCCAACTGGTCGTCCTCGATCCCAAACATGCACTTC CACTACCTGACGACGACACCCGAGCAAGGGTCGCGCCTCTACATGGACTTCATCTACAAGACTTATCCTCTAGGT TCCTTTGATACGCGGCCGCTCAACTTCTCTGACCTGAAAGCGACGCTATCGATTCGCAAGTTTCTGCTCGACAAG GTGTTCCAGACCTTTCCGCAGCGCAAGTTCATTCTCGTCGCCGACACGTCCAACCGCGACGTCATGAAGGACTAT CCACAGATGTACAAGGACCATCCCGAGCAGGTGCTGTGCATCTTGTTACGGAACACGAGCGCGACGGACCCGTCG GACAGGTTTCCCTACGACACGTCGGGCTTCCGCGACATCCCGCAAGAGCATTACATGTTCTTTACCGTGCCGGAC GACCTCGCCGGGTTGAATGTGCTTGGCTCCCAATGTCTCAACCAGTCGGTGCGGCAGAATGTCACCTTTCGGACG CAGGGCCTGCCCTCTTGGCTGAGCGTCGATGAGAGCAACGCACGGCGGGCGAGGGGGGCGGTTGGCATCGCGGTT GGGGCCTGGCTGGCGGCTTTGGCGACGACGGTGTTTTTGGGGATGCTGTAG |
| Gene | >Ophio5|5240 ATGCTGCGGTTTGTCGCCTCGGCGTCGGTGCTCGCCGTCGTTGCGTCGTCCGGCCCGGTGTCGACGCCCTCCTCA ACTCCGATTCCCTCGGCGACCGAGTCGATAGCGACGCCGACGCCGACGCCGACTCTCAAGATTGAGGCACGCGGC CTCAAGGACATCCAGAGCTACGTGTCGAGCCTGGCGGCCGGTGGGGCCAGTAAAATCTCTTCCTTTGTCCAGTCG GGCATCCTCGACTTTCCCTTGGGCTTTCCTACCGGCACCAATGTGGAGAAATCTGCCAGCGTTTCGGCATCTGCC GTCGAAGCGCAGCCGACCGAGGTGTTGAATCTACCGTGAGTATCTCCAATCTCTGCAGACGACCATGACATAACG CGAAGCGTATCTGTCAGCCCGTATGCCAACTGGACCGACGAGGGCTGGAACGTGCGCGTTCATGGCAACGTATTC AAGACGCCGAACATCTCGCAGGATAAGATTGACACGCTCGCCAATGCCTTCCTGATCGGAGTCGACGTCGACCAG CTGCAGCCGCCTGAGCAGGCTCAAGCCAGGAACTTGACGCGTTCCATCTTCATCTTTCAGCAGGGCGACAAGAGC GTCACCATGGACTTTGTCAACGACGTGGCTGTGCGGCCAAACGCGTCTGGGGGTGCTGTCAACGCTGTGAGCCGT CTTTCTAAACCTGATTTAAAAAAGGGGGGGGGGCTGCGGCTGACGAGAAAACCGATCAGGACGGCGGCGCGCAGA CGATCCCATTGCCTTTTAACACGACGGCTCAGGGCGACTTCGACGTCTTCGTCAAGCTGAAGAACACGACGAGTC CCAGCGGCCGAGGCCTGATAGCAGGCAACGAAACGTCGCGCATACAGACTCTCAACCTGTACGCCCAGGGCACCG ACACCGGCAACGCAACGGCATACCTCGTCCCTCCACAGGGCGTCACCATCATCTCCGACATCGACGACATCCTGC GCGTCACCAAAATCTATCAACCAAAAGAAGGCCTCCTTAACACGTTCGCGCGGCCCTTTGAAGCGTGGATGAACA TGCCGCAGATATACGCCAACTGGTCGTCCTCGATCCCAAACATGCACTTCCACTACCTGACGACGACACCCGAGC AAGGGTCGCGCCTCTACATGGACTTCATCTACAAGACTTATCCTCTAGGTTCCTTTGATACGCGGCCGCTCAACT TCTCTGACCTGAAAGCGACGCTATCGATTCGCAAGTTTCTGCTCGACAAGGTGTTCCAGACCTTTCCGCAGCGCA AGTTCATTCTCGTCGCCGACACGTCCAACCGCGACGTCATGAAGGACTATCCACAGATGTACAAGGACCATCCCG AGCAGGTGCTGTGCATCTTGTTACGGAACACGAGCGCGACGGACCCGTCGGACAGGTTTCCCTACGACACGTCGG GCTTCCGCGACATCCCGCAAGAGCATTACATGTTCTTTACCGTGCCGGACGACCTCGCCGGGTTGAATGTGCTTG GCTCCCAATGTCTCAACCAGTCGGTGCGGCAGAATGTCACCTTTCGGACGCAGGGCCTGCCCTCTTGGCTGAGCG TCGATGAGAGCAACGCACGGCGGGCGAGGGGGGCGGTTGGCATCGCGGTTGGGGCCTGGCTGGCGGCTTTGGCGA CGACGGTGTTTTTGGGGATGCTGTAG |