Protein ID | Ophio5|5229 |
Gene name | |
Location | scaffold_421:14015..15673 |
Strand | - |
Gene length (bp) | 1658 |
Transcript length (bp) | 1521 |
Coding sequence length (bp) | 1518 |
Protein length (aa) | 506 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08643 | DUF1776 | Fungal family of unknown function (DUF1776) | 3.5E-96 | 130 | 436 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9URV8|YBL3_SCHPO | UPF0744 protein C106.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC106.03 PE=1 SV=1 | 24 | 379 | 3.0E-16 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 27 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 97.78 | 53.16 | 142.41 |
CcL | In ants, during behavior modification | 97.85 | 46.94 | 148.76 |
CcD | In ants, recently dead | 100.83 | 54.70 | 146.96 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.998093 | no |
SC16a | CcD | 0.913971 | no |
CcL | CcD | 0.919200 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|5229 MSADDQHFLDLLSGIPVHLRHYSSEAADYVDRSIDRASSSLRDILAASAWIPDSIKPNPVVRPSTSAASAAASAA VSRFELARRWVARHKIVTGLFLVVCGTVAFKGYQDSRRRWPRKVRRAKRARNGGRVDVVVVAGSPTLPLTKSLSL DLEKRGFVVFVVCNAAEDENMVHAFSRPDIRPLTIDTTDPPRAGAAIERFASYLQSPQATGPQIKPNQLTLKSVI LIPSLHYQTSPIATIPPSSFADLFNTHLLQPILTIQAFLPLLTSRLNPVGEKWIPPKVLVFTPSIISSINPPFHA PEATVCSALAAFTEVLAAELRPLDIPVTHVQLGTFDFSSFSAPGRSFVPLAPGTPHDTLVWPDGARHVYGRNFVA QTTSAVSGGRIRDFKGSSLRYLHTTVFDVIDGSITSHSVRVGLGAGIYGFVGRWAPRSLVSWMMGIRRVDELSTW KASLEDAAGGCSPCDEGEDSATALSQEFIAVPSERNVWNTDTADSSLWVPSVSETS |
Coding | >Ophio5|5229 ATGTCCGCCGACGATCAACACTTTCTCGACTTGCTTTCCGGCATCCCCGTTCACCTACGCCACTACTCGAGTGAG GCCGCCGATTATGTTGACCGAAGTATCGACCGCGCTTCCTCGTCTCTGCGCGATATTCTGGCCGCCTCTGCGTGG ATTCCAGACTCGATAAAGCCAAATCCAGTCGTCAGGCCGTCTACTTCGGCTGCCAGTGCTGCTGCCTCGGCCGCC GTGTCGCGCTTCGAGCTGGCTCGTCGTTGGGTGGCGCGTCACAAGATTGTCACGGGCCTCTTCCTCGTCGTCTGC GGCACCGTTGCGTTCAAAGGCTATCAAGACAGTCGCCGTCGCTGGCCTCGTAAGGTCCGAAGAGCAAAAAGGGCG CGTAACGGCGGCCGCGTCGATGTCGTCGTCGTCGCCGGTTCGCCTACACTGCCCCTGACTAAGTCGCTTTCTCTC GACTTGGAGAAGCGCGGCTTCGTCGTCTTTGTTGTTTGCAATGCCGCCGAGGATGAGAACATGGTGCATGCCTTT TCGCGCCCGGATATACGGCCTCTTACCATCGACACCACCGACCCCCCCCGCGCCGGCGCCGCCATCGAGCGCTTC GCCAGCTATCTGCAGTCGCCGCAGGCTACCGGTCCCCAGATCAAGCCGAATCAGCTGACTCTCAAGTCGGTCATC CTCATTCCCAGCCTCCACTACCAGACGTCGCCCATCGCCACGATACCGCCCTCGAGCTTCGCCGACCTCTTCAAC ACCCATCTCCTGCAGCCCATTCTAACCATCCAGGCCTTCCTCCCACTGCTCACGTCGCGACTGAACCCCGTCGGA GAGAAATGGATCCCGCCCAAGGTCCTCGTCTTCACGCCGTCCATCATCTCCTCCATCAACCCGCCCTTCCACGCC CCCGAGGCCACCGTCTGCTCGGCCCTAGCCGCCTTCACCGAGGTGCTGGCCGCCGAGCTGCGCCCACTCGACATA CCCGTCACCCACGTCCAGCTCGGCACCTTTGACTTTTCCAGCTTCTCCGCCCCGGGCCGGTCCTTCGTCCCGCTC GCGCCAGGAACGCCCCACGACACGCTCGTGTGGCCCGACGGCGCGCGCCACGTCTACGGCCGCAATTTCGTGGCC CAGACCACGTCGGCTGTCTCGGGCGGTCGCATCCGCGATTTCAAGGGCAGCTCGCTGCGTTATCTGCACACGACC GTCTTCGACGTCATCGACGGCTCCATCACCAGCCACTCGGTTCGCGTCGGCCTCGGCGCCGGCATCTACGGCTTC GTCGGCCGCTGGGCGCCCCGCAGCCTCGTCTCGTGGATGATGGGCATCCGTCGCGTCGACGAGCTGTCGACCTGG AAGGCCAGCCTGGAGGATGCGGCTGGGGGGTGCTCGCCTTGCGACGAGGGCGAGGACTCGGCTACGGCGCTGTCC CAAGAGTTCATCGCCGTCCCGTCGGAGCGTAACGTCTGGAACACGGACACGGCTGATAGTAGCCTGTGGGTACCG TCGGTATCCGAGACGTCG |
Transcript | >Ophio5|5229 ATGTCCGCCGACGATCAACACTTTCTCGACTTGCTTTCCGGCATCCCCGTTCACCTACGCCACTACTCGAGTGAG GCCGCCGATTATGTTGACCGAAGTATCGACCGCGCTTCCTCGTCTCTGCGCGATATTCTGGCCGCCTCTGCGTGG ATTCCAGACTCGATAAAGCCAAATCCAGTCGTCAGGCCGTCTACTTCGGCTGCCAGTGCTGCTGCCTCGGCCGCC GTGTCGCGCTTCGAGCTGGCTCGTCGTTGGGTGGCGCGTCACAAGATTGTCACGGGCCTCTTCCTCGTCGTCTGC GGCACCGTTGCGTTCAAAGGCTATCAAGACAGTCGCCGTCGCTGGCCTCGTAAGGTCCGAAGAGCAAAAAGGGCG CGTAACGGCGGCCGCGTCGATGTCGTCGTCGTCGCCGGTTCGCCTACACTGCCCCTGACTAAGTCGCTTTCTCTC GACTTGGAGAAGCGCGGCTTCGTCGTCTTTGTTGTTTGCAATGCCGCCGAGGATGAGAACATGGTGCATGCCTTT TCGCGCCCGGATATACGGCCTCTTACCATCGACACCACCGACCCCCCCCGCGCCGGCGCCGCCATCGAGCGCTTC GCCAGCTATCTGCAGTCGCCGCAGGCTACCGGTCCCCAGATCAAGCCGAATCAGCTGACTCTCAAGTCGGTCATC CTCATTCCCAGCCTCCACTACCAGACGTCGCCCATCGCCACGATACCGCCCTCGAGCTTCGCCGACCTCTTCAAC ACCCATCTCCTGCAGCCCATTCTAACCATCCAGGCCTTCCTCCCACTGCTCACGTCGCGACTGAACCCCGTCGGA GAGAAATGGATCCCGCCCAAGGTCCTCGTCTTCACGCCGTCCATCATCTCCTCCATCAACCCGCCCTTCCACGCC CCCGAGGCCACCGTCTGCTCGGCCCTAGCCGCCTTCACCGAGGTGCTGGCCGCCGAGCTGCGCCCACTCGACATA CCCGTCACCCACGTCCAGCTCGGCACCTTTGACTTTTCCAGCTTCTCCGCCCCGGGCCGGTCCTTCGTCCCGCTC GCGCCAGGAACGCCCCACGACACGCTCGTGTGGCCCGACGGCGCGCGCCACGTCTACGGCCGCAATTTCGTGGCC CAGACCACGTCGGCTGTCTCGGGCGGTCGCATCCGCGATTTCAAGGGCAGCTCGCTGCGTTATCTGCACACGACC GTCTTCGACGTCATCGACGGCTCCATCACCAGCCACTCGGTTCGCGTCGGCCTCGGCGCCGGCATCTACGGCTTC GTCGGCCGCTGGGCGCCCCGCAGCCTCGTCTCGTGGATGATGGGCATCCGTCGCGTCGACGAGCTGTCGACCTGG AAGGCCAGCCTGGAGGATGCGGCTGGGGGGTGCTCGCCTTGCGACGAGGGCGAGGACTCGGCTACGGCGCTGTCC CAAGAGTTCATCGCCGTCCCGTCGGAGCGTAACGTCTGGAACACGGACACGGCTGATAGTAGCCTGTGGGTACCG TCGGTATCCGAGACGTCGTAA |
Gene | >Ophio5|5229 ATGTCCGCCGACGATCAACACTTTCTCGACTTGGTTTGTTGCCCCCTCCCGTTCTTGGGAATTTTTTTTTCCCCA TCTTATTTGTTTCTGACTGATGGATCTTGTCCAGCTTTCCGGCATCCCCGTTCACCTACGCCACTACTCGAGTGA GGCCGCCGATTATGTTGACCGAAGTATCGACCGCGCTTCCTCGTCTCTGCGCGATATTCTGGCCGCCTCTGCGTG GATTCCAGACTCGATAAAGCCAAATCCAGTCGTCAGGCCGTCTACTTCGGCTGCCAGTGCTGCTGCCTCGGCCGC CGTGTCGCGCTTCGAGCTGGCTCGTCGTTGGGTGGCGCGTCACAAGATTGTCACGGGCCTCTTCCTCGTCGTCTG CGGCACCGTTGCGTTCAAAGGCTATCAAGACAGTCGCCGTCGCTGGCCTCGTAAGGTCCGAAGAGCAAAAAGGGC GCGTAACGGCGGCCGCGTCGATGTCGTCGTCGTCGCCGGTTCGCCTACACTGCCCCTGACTAAGTCGCTTTCTCT CGACTTGGAGAAGCGCGGCTTCGTCGTCTTTGTTGTTTGCAATGCCGCCGAGGATGAGAACATGGTGCATGCCTT TTCGCGCCCGGATATACGGCCTCTTACCATCGACACCACCGACGTGCGTCCTCTTCCCCTTCAGCACAAACAACG TCTTTGTTTTGCTAAACTCCTCCGTCCAGCCCCCCCGCGCCGGCGCCGCCATCGAGCGCTTCGCCAGCTATCTGC AGTCGCCGCAGGCTACCGGTCCCCAGATCAAGCCGAATCAGCTGACTCTCAAGTCGGTCATCCTCATTCCCAGCC TCCACTACCAGACGTCGCCCATCGCCACGATACCGCCCTCGAGCTTCGCCGACCTCTTCAACACCCATCTCCTGC AGCCCATTCTAACCATCCAGGCCTTCCTCCCACTGCTCACGTCGCGACTGAACCCCGTCGGAGAGAAATGGATCC CGCCCAAGGTCCTCGTCTTCACGCCGTCCATCATCTCCTCCATCAACCCGCCCTTCCACGCCCCCGAGGCCACCG TCTGCTCGGCCCTAGCCGCCTTCACCGAGGTGCTGGCCGCCGAGCTGCGCCCACTCGACATACCCGTCACCCACG TCCAGCTCGGCACCTTTGACTTTTCCAGCTTCTCCGCCCCGGGCCGGTCCTTCGTCCCGCTCGCGCCAGGAACGC CCCACGACACGCTCGTGTGGCCCGACGGCGCGCGCCACGTCTACGGCCGCAATTTCGTGGCCCAGACCACGTCGG CTGTCTCGGGCGGTCGCATCCGCGATTTCAAGGGCAGCTCGCTGCGTTATCTGCACACGACCGTCTTCGACGTCA TCGACGGCTCCATCACCAGCCACTCGGTTCGCGTCGGCCTCGGCGCCGGCATCTACGGCTTCGTCGGCCGCTGGG CGCCCCGCAGCCTCGTCTCGTGGATGATGGGCATCCGTCGCGTCGACGAGCTGTCGACCTGGAAGGCCAGCCTGG AGGATGCGGCTGGGGGGTGCTCGCCTTGCGACGAGGGCGAGGACTCGGCTACGGCGCTGTCCCAAGAGTTCATCG CCGTCCCGTCGGAGCGTAACGTCTGGAACACGGACACGGCTGATAGTAGCCTGTGGGTACCGTCGGTATCCGAGA CGTCGTAA |