Protein ID | Ophio5|5229 |
Gene name | |
Location | scaffold_421:14015..15673 |
Strand | - |
Gene length (bp) | 1658 |
Transcript length (bp) | 1521 |
Coding sequence length (bp) | 1518 |
Protein length (aa) | 506 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08643 | DUF1776 | Fungal family of unknown function (DUF1776) | 3.5E-96 | 130 | 436 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9URV8|YBL3_SCHPO | UPF0744 protein C106.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC106.03 PE=1 SV=1 | 24 | 379 | 3.0E-16 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion | Peroxisomal targeting signal | 0.1784 | 0.0977 | 0.2912 | 0.0239 | 0.7798 | 0.185 | 0.553 | 0.2072 | 0.3212 | 0.5747 |
Orthofinder run ID | 4 |
Orthogroup | 3146 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|5229 MSADDQHFLDLLSGIPVHLRHYSSEAADYVDRSIDRASSSLRDILAASAWIPDSIKPNPVVRPSTSAASAAASAA VSRFELARRWVARHKIVTGLFLVVCGTVAFKGYQDSRRRWPRKVRRAKRARNGGRVDVVVVAGSPTLPLTKSLSL DLEKRGFVVFVVCNAAEDENMVHAFSRPDIRPLTIDTTDPPRAGAAIERFASYLQSPQATGPQIKPNQLTLKSVI LIPSLHYQTSPIATIPPSSFADLFNTHLLQPILTIQAFLPLLTSRLNPVGEKWIPPKVLVFTPSIISSINPPFHA PEATVCSALAAFTEVLAAELRPLDIPVTHVQLGTFDFSSFSAPGRSFVPLAPGTPHDTLVWPDGARHVYGRNFVA QTTSAVSGGRIRDFKGSSLRYLHTTVFDVIDGSITSHSVRVGLGAGIYGFVGRWAPRSLVSWMMGIRRVDELSTW KASLEDAAGGCSPCDEGEDSATALSQEFIAVPSERNVWNTDTADSSLWVPSVSETS |
Coding | >Ophio5|5229 ATGTCCGCCGACGATCAACACTTTCTCGACTTGCTTTCCGGCATCCCCGTTCACCTACGCCACTACTCGAGTGAG GCCGCCGATTATGTTGACCGAAGTATCGACCGCGCTTCCTCGTCTCTGCGCGATATTCTGGCCGCCTCTGCGTGG ATTCCAGACTCGATAAAGCCAAATCCAGTCGTCAGGCCGTCTACTTCGGCTGCCAGTGCTGCTGCCTCGGCCGCC GTGTCGCGCTTCGAGCTGGCTCGTCGTTGGGTGGCGCGTCACAAGATTGTCACGGGCCTCTTCCTCGTCGTCTGC GGCACCGTTGCGTTCAAAGGCTATCAAGACAGTCGCCGTCGCTGGCCTCGTAAGGTCCGAAGAGCAAAAAGGGCG CGTAACGGCGGCCGCGTCGATGTCGTCGTCGTCGCCGGTTCGCCTACACTGCCCCTGACTAAGTCGCTTTCTCTC GACTTGGAGAAGCGCGGCTTCGTCGTCTTTGTTGTTTGCAATGCCGCCGAGGATGAGAACATGGTGCATGCCTTT TCGCGCCCGGATATACGGCCTCTTACCATCGACACCACCGACCCCCCCCGCGCCGGCGCCGCCATCGAGCGCTTC GCCAGCTATCTGCAGTCGCCGCAGGCTACCGGTCCCCAGATCAAGCCGAATCAGCTGACTCTCAAGTCGGTCATC CTCATTCCCAGCCTCCACTACCAGACGTCGCCCATCGCCACGATACCGCCCTCGAGCTTCGCCGACCTCTTCAAC ACCCATCTCCTGCAGCCCATTCTAACCATCCAGGCCTTCCTCCCACTGCTCACGTCGCGACTGAACCCCGTCGGA GAGAAATGGATCCCGCCCAAGGTCCTCGTCTTCACGCCGTCCATCATCTCCTCCATCAACCCGCCCTTCCACGCC CCCGAGGCCACCGTCTGCTCGGCCCTAGCCGCCTTCACCGAGGTGCTGGCCGCCGAGCTGCGCCCACTCGACATA CCCGTCACCCACGTCCAGCTCGGCACCTTTGACTTTTCCAGCTTCTCCGCCCCGGGCCGGTCCTTCGTCCCGCTC GCGCCAGGAACGCCCCACGACACGCTCGTGTGGCCCGACGGCGCGCGCCACGTCTACGGCCGCAATTTCGTGGCC CAGACCACGTCGGCTGTCTCGGGCGGTCGCATCCGCGATTTCAAGGGCAGCTCGCTGCGTTATCTGCACACGACC GTCTTCGACGTCATCGACGGCTCCATCACCAGCCACTCGGTTCGCGTCGGCCTCGGCGCCGGCATCTACGGCTTC GTCGGCCGCTGGGCGCCCCGCAGCCTCGTCTCGTGGATGATGGGCATCCGTCGCGTCGACGAGCTGTCGACCTGG AAGGCCAGCCTGGAGGATGCGGCTGGGGGGTGCTCGCCTTGCGACGAGGGCGAGGACTCGGCTACGGCGCTGTCC CAAGAGTTCATCGCCGTCCCGTCGGAGCGTAACGTCTGGAACACGGACACGGCTGATAGTAGCCTGTGGGTACCG TCGGTATCCGAGACGTCG |
Transcript | >Ophio5|5229 ATGTCCGCCGACGATCAACACTTTCTCGACTTGCTTTCCGGCATCCCCGTTCACCTACGCCACTACTCGAGTGAG GCCGCCGATTATGTTGACCGAAGTATCGACCGCGCTTCCTCGTCTCTGCGCGATATTCTGGCCGCCTCTGCGTGG ATTCCAGACTCGATAAAGCCAAATCCAGTCGTCAGGCCGTCTACTTCGGCTGCCAGTGCTGCTGCCTCGGCCGCC GTGTCGCGCTTCGAGCTGGCTCGTCGTTGGGTGGCGCGTCACAAGATTGTCACGGGCCTCTTCCTCGTCGTCTGC GGCACCGTTGCGTTCAAAGGCTATCAAGACAGTCGCCGTCGCTGGCCTCGTAAGGTCCGAAGAGCAAAAAGGGCG CGTAACGGCGGCCGCGTCGATGTCGTCGTCGTCGCCGGTTCGCCTACACTGCCCCTGACTAAGTCGCTTTCTCTC GACTTGGAGAAGCGCGGCTTCGTCGTCTTTGTTGTTTGCAATGCCGCCGAGGATGAGAACATGGTGCATGCCTTT TCGCGCCCGGATATACGGCCTCTTACCATCGACACCACCGACCCCCCCCGCGCCGGCGCCGCCATCGAGCGCTTC GCCAGCTATCTGCAGTCGCCGCAGGCTACCGGTCCCCAGATCAAGCCGAATCAGCTGACTCTCAAGTCGGTCATC CTCATTCCCAGCCTCCACTACCAGACGTCGCCCATCGCCACGATACCGCCCTCGAGCTTCGCCGACCTCTTCAAC ACCCATCTCCTGCAGCCCATTCTAACCATCCAGGCCTTCCTCCCACTGCTCACGTCGCGACTGAACCCCGTCGGA GAGAAATGGATCCCGCCCAAGGTCCTCGTCTTCACGCCGTCCATCATCTCCTCCATCAACCCGCCCTTCCACGCC CCCGAGGCCACCGTCTGCTCGGCCCTAGCCGCCTTCACCGAGGTGCTGGCCGCCGAGCTGCGCCCACTCGACATA CCCGTCACCCACGTCCAGCTCGGCACCTTTGACTTTTCCAGCTTCTCCGCCCCGGGCCGGTCCTTCGTCCCGCTC GCGCCAGGAACGCCCCACGACACGCTCGTGTGGCCCGACGGCGCGCGCCACGTCTACGGCCGCAATTTCGTGGCC CAGACCACGTCGGCTGTCTCGGGCGGTCGCATCCGCGATTTCAAGGGCAGCTCGCTGCGTTATCTGCACACGACC GTCTTCGACGTCATCGACGGCTCCATCACCAGCCACTCGGTTCGCGTCGGCCTCGGCGCCGGCATCTACGGCTTC GTCGGCCGCTGGGCGCCCCGCAGCCTCGTCTCGTGGATGATGGGCATCCGTCGCGTCGACGAGCTGTCGACCTGG AAGGCCAGCCTGGAGGATGCGGCTGGGGGGTGCTCGCCTTGCGACGAGGGCGAGGACTCGGCTACGGCGCTGTCC CAAGAGTTCATCGCCGTCCCGTCGGAGCGTAACGTCTGGAACACGGACACGGCTGATAGTAGCCTGTGGGTACCG TCGGTATCCGAGACGTCGTAA |
Gene | >Ophio5|5229 ATGTCCGCCGACGATCAACACTTTCTCGACTTGGTTTGTTGCCCCCTCCCGTTCTTGGGAATTTTTTTTTCCCCA TCTTATTTGTTTCTGACTGATGGATCTTGTCCAGCTTTCCGGCATCCCCGTTCACCTACGCCACTACTCGAGTGA GGCCGCCGATTATGTTGACCGAAGTATCGACCGCGCTTCCTCGTCTCTGCGCGATATTCTGGCCGCCTCTGCGTG GATTCCAGACTCGATAAAGCCAAATCCAGTCGTCAGGCCGTCTACTTCGGCTGCCAGTGCTGCTGCCTCGGCCGC CGTGTCGCGCTTCGAGCTGGCTCGTCGTTGGGTGGCGCGTCACAAGATTGTCACGGGCCTCTTCCTCGTCGTCTG CGGCACCGTTGCGTTCAAAGGCTATCAAGACAGTCGCCGTCGCTGGCCTCGTAAGGTCCGAAGAGCAAAAAGGGC GCGTAACGGCGGCCGCGTCGATGTCGTCGTCGTCGCCGGTTCGCCTACACTGCCCCTGACTAAGTCGCTTTCTCT CGACTTGGAGAAGCGCGGCTTCGTCGTCTTTGTTGTTTGCAATGCCGCCGAGGATGAGAACATGGTGCATGCCTT TTCGCGCCCGGATATACGGCCTCTTACCATCGACACCACCGACGTGCGTCCTCTTCCCCTTCAGCACAAACAACG TCTTTGTTTTGCTAAACTCCTCCGTCCAGCCCCCCCGCGCCGGCGCCGCCATCGAGCGCTTCGCCAGCTATCTGC AGTCGCCGCAGGCTACCGGTCCCCAGATCAAGCCGAATCAGCTGACTCTCAAGTCGGTCATCCTCATTCCCAGCC TCCACTACCAGACGTCGCCCATCGCCACGATACCGCCCTCGAGCTTCGCCGACCTCTTCAACACCCATCTCCTGC AGCCCATTCTAACCATCCAGGCCTTCCTCCCACTGCTCACGTCGCGACTGAACCCCGTCGGAGAGAAATGGATCC CGCCCAAGGTCCTCGTCTTCACGCCGTCCATCATCTCCTCCATCAACCCGCCCTTCCACGCCCCCGAGGCCACCG TCTGCTCGGCCCTAGCCGCCTTCACCGAGGTGCTGGCCGCCGAGCTGCGCCCACTCGACATACCCGTCACCCACG TCCAGCTCGGCACCTTTGACTTTTCCAGCTTCTCCGCCCCGGGCCGGTCCTTCGTCCCGCTCGCGCCAGGAACGC CCCACGACACGCTCGTGTGGCCCGACGGCGCGCGCCACGTCTACGGCCGCAATTTCGTGGCCCAGACCACGTCGG CTGTCTCGGGCGGTCGCATCCGCGATTTCAAGGGCAGCTCGCTGCGTTATCTGCACACGACCGTCTTCGACGTCA TCGACGGCTCCATCACCAGCCACTCGGTTCGCGTCGGCCTCGGCGCCGGCATCTACGGCTTCGTCGGCCGCTGGG CGCCCCGCAGCCTCGTCTCGTGGATGATGGGCATCCGTCGCGTCGACGAGCTGTCGACCTGGAAGGCCAGCCTGG AGGATGCGGCTGGGGGGTGCTCGCCTTGCGACGAGGGCGAGGACTCGGCTACGGCGCTGTCCCAAGAGTTCATCG CCGTCCCGTCGGAGCGTAACGTCTGGAACACGGACACGGCTGATAGTAGCCTGTGGGTACCGTCGGTATCCGAGA CGTCGTAA |