© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5209 |
| Gene name | |
| Location | scaffold_42:42861..43329 |
| Strand | + |
| Gene length (bp) | 468 |
| Transcript length (bp) | 468 |
| Coding sequence length (bp) | 465 |
| Protein length (aa) | 155 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07543 | PGA2 | Protein trafficking PGA2 | 2.1E-38 | 31 | 154 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6S6|PGA2_SCHPO | PGA2-homolog C27.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC27.01c PE=1 SV=1 | 26 | 155 | 3.0E-11 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 44 | 63 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5209 MEDQQDHQQPELNALGKLVARLFEYGHNASNNLQDSFSKLSLQSWIRLTVIVGGYMLLRPYIMKLATKTAVRKME EEDAKSRSEAPAEPQLTPNEFRGIKEKLYEAQDDGDGTGADWGSRARARQRQMLKDLLEEEERRRAAENEDADIQ EFLED |
| Coding | >Ophio5|5209 ATGGAGGACCAGCAGGACCATCAGCAGCCGGAGCTCAATGCCCTCGGCAAGCTAGTCGCCCGCCTCTTCGAGTAT GGCCACAACGCCAGCAACAATCTTCAGGATAGTTTTTCCAAACTGTCGTTACAATCCTGGATCCGTCTTACCGTC ATCGTCGGGGGATATATGCTGCTGCGGCCATACATTATGAAGTTGGCGACTAAGACTGCGGTCCGCAAGATGGAA GAGGAAGACGCCAAGTCGCGAAGCGAGGCGCCGGCCGAGCCACAATTGACGCCAAACGAGTTCCGCGGCATCAAG GAGAAACTATACGAGGCGCAGGACGACGGCGACGGGACCGGCGCCGATTGGGGAAGTAGGGCGAGGGCGCGGCAG CGGCAGATGCTCAAGGACCTCCTCGAGGAGGAGGAGAGGCGACGGGCGGCAGAAAACGAGGACGCCGACATTCAA GAGTTCTTGGAGGAC |
| Transcript | >Ophio5|5209 ATGGAGGACCAGCAGGACCATCAGCAGCCGGAGCTCAATGCCCTCGGCAAGCTAGTCGCCCGCCTCTTCGAGTAT GGCCACAACGCCAGCAACAATCTTCAGGATAGTTTTTCCAAACTGTCGTTACAATCCTGGATCCGTCTTACCGTC ATCGTCGGGGGATATATGCTGCTGCGGCCATACATTATGAAGTTGGCGACTAAGACTGCGGTCCGCAAGATGGAA GAGGAAGACGCCAAGTCGCGAAGCGAGGCGCCGGCCGAGCCACAATTGACGCCAAACGAGTTCCGCGGCATCAAG GAGAAACTATACGAGGCGCAGGACGACGGCGACGGGACCGGCGCCGATTGGGGAAGTAGGGCGAGGGCGCGGCAG CGGCAGATGCTCAAGGACCTCCTCGAGGAGGAGGAGAGGCGACGGGCGGCAGAAAACGAGGACGCCGACATTCAA GAGTTCTTGGAGGACTGA |
| Gene | >Ophio5|5209 ATGGAGGACCAGCAGGACCATCAGCAGCCGGAGCTCAATGCCCTCGGCAAGCTAGTCGCCCGCCTCTTCGAGTAT GGCCACAACGCCAGCAACAATCTTCAGGATAGTTTTTCCAAACTGTCGTTACAATCCTGGATCCGTCTTACCGTC ATCGTCGGGGGATATATGCTGCTGCGGCCATACATTATGAAGTTGGCGACTAAGACTGCGGTCCGCAAGATGGAA GAGGAAGACGCCAAGTCGCGAAGCGAGGCGCCGGCCGAGCCACAATTGACGCCAAACGAGTTCCGCGGCATCAAG GAGAAACTATACGAGGCGCAGGACGACGGCGACGGGACCGGCGCCGATTGGGGAAGTAGGGCGAGGGCGCGGCAG CGGCAGATGCTCAAGGACCTCCTCGAGGAGGAGGAGAGGCGACGGGCGGCAGAAAACGAGGACGCCGACATTCAA GAGTTCTTGGAGGACTGA |