© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5202 |
| Gene name | |
| Location | scaffold_42:27063..29469 |
| Strand | - |
| Gene length (bp) | 2406 |
| Transcript length (bp) | 2406 |
| Coding sequence length (bp) | 2403 |
| Protein length (aa) | 801 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08124 | Lyase_8_N | Polysaccharide lyase family 8, N terminal alpha-helical domain | 9.0E-79 | 66 | 388 |
| PF02278 | Lyase_8 | Polysaccharide lyase family 8, super-sandwich domain | 5.5E-73 | 432 | 691 |
| PF02884 | Lyase_8_C | Polysaccharide lyase family 8, C-terminal beta-sandwich domain | 9.4E-08 | 704 | 760 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9AQS0|XANLY_BACGL | Xanthan lyase OS=Bacillus sp. (strain GL1) GN=xly PE=1 SV=1 | 57 | 776 | 6.0E-107 |
| sp|P0CZ01|HYSA_PROAC | Hyaluronate lyase OS=Propionibacterium acnes (strain KPA171202 / DSM 16379) GN=PPA0380 PE=3 SV=1 | 57 | 776 | 3.0E-99 |
| sp|P0CZ00|HYSA_PROAA | Hyaluronate lyase OS=Propionibacterium acnes PE=1 SV=1 | 57 | 776 | 1.0E-88 |
| sp|Q54873|HYSA_STRPN | Hyaluronate lyase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN=SP_0314 PE=1 SV=2 | 126 | 715 | 1.0E-73 |
| sp|Q59801|HYSA_STAA8 | Hyaluronate lyase OS=Staphylococcus aureus (strain NCTC 8325) GN=hysA PE=3 SV=1 | 59 | 716 | 3.0E-69 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9AQS0|XANLY_BACGL | Xanthan lyase OS=Bacillus sp. (strain GL1) GN=xly PE=1 SV=1 | 57 | 776 | 6.0E-107 |
| sp|P0CZ01|HYSA_PROAC | Hyaluronate lyase OS=Propionibacterium acnes (strain KPA171202 / DSM 16379) GN=PPA0380 PE=3 SV=1 | 57 | 776 | 3.0E-99 |
| sp|P0CZ00|HYSA_PROAA | Hyaluronate lyase OS=Propionibacterium acnes PE=1 SV=1 | 57 | 776 | 1.0E-88 |
| sp|Q54873|HYSA_STRPN | Hyaluronate lyase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN=SP_0314 PE=1 SV=2 | 126 | 715 | 1.0E-73 |
| sp|Q59801|HYSA_STAA8 | Hyaluronate lyase OS=Staphylococcus aureus (strain NCTC 8325) GN=hysA PE=3 SV=1 | 59 | 716 | 3.0E-69 |
| sp|Q53591|HYSA_STRA3 | Hyaluronate lyase OS=Streptococcus agalactiae serotype III (strain NEM316) GN=hylB PE=1 SV=2 | 52 | 715 | 3.0E-66 |
| sp|Q59288|CSLA_PEDHD | Chondroitinase-AC OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) GN=cslA PE=1 SV=1 | 181 | 785 | 7.0E-32 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016829 | lyase activity | Yes |
| GO:0005576 | extracellular region | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0003824 | catalytic activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 22 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5202 MRLDLLVTSLLALKSVNRALARPTTDEPNLALRRPSQRDWSTVDSAGNEKPTYASGDSFDRLRQRWRDMILGTDF PAQSKPFKSLLLSLGRRAARFGDGFAPASGWLWPDLVYADAGAETTASQQSSAITKSFRRLLVMAHAWAQPGTGL TGDSDLLSVILRGVDQLRRDVYNPSQEPFGNWWNWKIGIPDILMDLCAILYHQLGAERIADLVAANQHFVPGSAI ASYLGSSTGANRISQCRSVVFSGIFGKSASRLFRARDALSPVFPPVTSGDGFYTDGSFIQHKSIPYTGTYGSVLI NGVAKLTTLLAGSEWAVTDDRFQLLLDTVEKSFAPFIYNGLVMDGVSGRAVSRLSTDHTRGHSILESILLLTDSA SADERARWKAMVKGWIVRDQYAPVWSDTAMTIAELARLKKLVDDETVAAAPEPTTGHSVFSSMDRVVHRRPGWAA SVSMSSVRTSFYETGNGENKRGWHANSGMLYWWTADGLGQYSDRFWPTVDPYRLPGTTVSRKPLADGAGGKWGRD MPDAEWVGGATDGEFGAIGQDVRGLESSLRGHKSWFFLADVIVCLGAGLSSTDGEVVETTYDNRNLGASGTDMIL TVDGLRQPSSTVGNSLELVGASWAHLQHSGGYLFLDDGAVIALREARTGSRRDIDDEGSPTTFTRTYLGLYRHHG IDPTNSSYAYAVLPGATANQTRAAVGSVQVVENGADIQAVRIGDVFAANFFAPGVVGALRVSAPCSVLIRASTVY IADPTRSINNTIQVEWQNKTRSVSLDGKAGATVSLDFSIPFLPSPAIPASI |
| Coding | >Ophio5|5202 ATGAGACTCGACCTTCTCGTCACCAGCCTGTTGGCGTTGAAAAGTGTGAACAGAGCGCTGGCAAGGCCGACGACA GACGAGCCCAACCTCGCCCTTCGGAGGCCAAGCCAACGAGATTGGTCGACGGTTGATTCTGCGGGAAATGAGAAG CCGACGTACGCGTCTGGGGATAGCTTCGACAGATTGCGGCAGCGCTGGCGCGATATGATTCTCGGTACTGACTTT CCCGCCCAGTCGAAGCCGTTCAAGTCTCTTCTCCTGTCTCTCGGGAGGAGAGCGGCCCGGTTCGGCGATGGCTTC GCCCCGGCCTCCGGATGGCTCTGGCCCGATCTGGTCTACGCCGACGCCGGAGCGGAGACGACGGCGTCGCAGCAG TCTTCGGCCATCACCAAGAGCTTTAGAAGGCTGCTCGTCATGGCACACGCCTGGGCTCAGCCCGGCACCGGCCTC ACGGGCGACTCGGACCTACTGAGCGTCATCCTCAGGGGCGTCGACCAGTTACGGCGAGATGTCTACAATCCGTCG CAGGAACCGTTTGGAAACTGGTGGAACTGGAAGATTGGCATCCCGGACATCTTGATGGACTTGTGCGCCATCCTC TATCACCAACTCGGTGCTGAACGCATCGCCGACCTGGTGGCGGCCAACCAACACTTCGTTCCCGGCTCCGCCATC GCCTCCTATCTCGGATCCAGCACGGGAGCGAACCGCATCAGCCAATGTCGCTCCGTCGTCTTTTCCGGCATCTTT GGAAAATCGGCCTCTCGTCTGTTCCGGGCCCGCGATGCGCTCTCTCCCGTCTTCCCGCCCGTGACGTCGGGCGAC GGCTTCTACACCGACGGTTCCTTCATACAGCACAAGTCGATTCCTTACACGGGCACCTACGGCAGCGTCCTGATC AACGGCGTCGCCAAGCTGACGACGCTGCTGGCGGGCTCCGAGTGGGCCGTCACCGACGACCGCTTCCAGCTCTTG CTCGACACCGTCGAAAAGTCCTTTGCCCCCTTCATCTACAACGGCCTCGTCATGGATGGCGTCTCCGGCAGGGCC GTCAGTCGGCTGTCGACCGATCATACTCGCGGTCACAGCATCCTCGAGAGCATCTTGCTGCTGACGGACAGCGCC TCGGCCGACGAGAGAGCTCGGTGGAAGGCCATGGTCAAGGGCTGGATCGTTCGGGACCAGTACGCTCCCGTGTGG TCCGACACGGCCATGACCATCGCCGAACTGGCCCGGCTCAAGAAGCTAGTCGACGATGAGACGGTAGCGGCCGCT CCGGAGCCGACGACCGGCCACTCCGTATTCTCCAGCATGGACCGTGTCGTCCATCGCCGGCCGGGCTGGGCCGCC AGCGTCAGCATGTCCTCGGTCCGCACCAGCTTCTACGAGACCGGCAACGGCGAGAACAAGCGCGGCTGGCACGCC AACAGCGGCATGCTCTACTGGTGGACGGCCGACGGCCTCGGTCAGTATTCCGACCGCTTCTGGCCCACCGTCGAC CCTTATCGTCTTCCCGGTACCACCGTCTCCCGGAAGCCGCTGGCCGACGGCGCCGGCGGCAAGTGGGGCCGGGAC ATGCCGGATGCCGAGTGGGTCGGCGGCGCCACCGACGGCGAGTTCGGGGCCATCGGTCAAGACGTTCGCGGTCTG GAGAGCAGCCTTCGGGGCCACAAGTCGTGGTTCTTTCTCGCCGACGTCATCGTCTGCCTGGGCGCCGGCCTGTCC AGCACCGATGGAGAAGTGGTCGAGACGACGTACGACAACCGCAACCTCGGCGCTTCCGGCACCGACATGATACTC ACCGTAGACGGCCTTCGGCAGCCGTCGTCGACGGTAGGGAACTCACTGGAGTTGGTAGGCGCAAGCTGGGCTCAC CTCCAACACTCCGGCGGTTACCTCTTCCTCGATGACGGTGCCGTCATCGCTCTCCGCGAGGCTCGAACCGGCAGC CGGCGAGACATCGATGACGAAGGCAGCCCCACCACCTTCACCCGTACCTACCTCGGCCTCTACCGCCATCACGGC ATCGACCCGACCAACAGCAGCTACGCCTACGCCGTCCTTCCGGGCGCCACCGCCAACCAGACCCGAGCCGCCGTA GGCTCCGTCCAGGTAGTCGAGAATGGCGCCGACATACAAGCCGTTCGCATCGGTGACGTCTTTGCCGCAAACTTC TTCGCCCCCGGCGTCGTCGGAGCGCTCCGTGTCTCGGCCCCTTGCAGCGTTCTGATCCGGGCGTCGACCGTCTAC ATCGCCGACCCGACCAGGTCCATCAATAATACCATCCAGGTCGAGTGGCAAAACAAGACTCGCTCCGTGAGCCTT GACGGCAAGGCGGGCGCCACTGTTTCCTTGGACTTTTCTATCCCCTTCCTTCCATCACCAGCCATTCCAGCCAGT ATA |
| Transcript | >Ophio5|5202 ATGAGACTCGACCTTCTCGTCACCAGCCTGTTGGCGTTGAAAAGTGTGAACAGAGCGCTGGCAAGGCCGACGACA GACGAGCCCAACCTCGCCCTTCGGAGGCCAAGCCAACGAGATTGGTCGACGGTTGATTCTGCGGGAAATGAGAAG CCGACGTACGCGTCTGGGGATAGCTTCGACAGATTGCGGCAGCGCTGGCGCGATATGATTCTCGGTACTGACTTT CCCGCCCAGTCGAAGCCGTTCAAGTCTCTTCTCCTGTCTCTCGGGAGGAGAGCGGCCCGGTTCGGCGATGGCTTC GCCCCGGCCTCCGGATGGCTCTGGCCCGATCTGGTCTACGCCGACGCCGGAGCGGAGACGACGGCGTCGCAGCAG TCTTCGGCCATCACCAAGAGCTTTAGAAGGCTGCTCGTCATGGCACACGCCTGGGCTCAGCCCGGCACCGGCCTC ACGGGCGACTCGGACCTACTGAGCGTCATCCTCAGGGGCGTCGACCAGTTACGGCGAGATGTCTACAATCCGTCG CAGGAACCGTTTGGAAACTGGTGGAACTGGAAGATTGGCATCCCGGACATCTTGATGGACTTGTGCGCCATCCTC TATCACCAACTCGGTGCTGAACGCATCGCCGACCTGGTGGCGGCCAACCAACACTTCGTTCCCGGCTCCGCCATC GCCTCCTATCTCGGATCCAGCACGGGAGCGAACCGCATCAGCCAATGTCGCTCCGTCGTCTTTTCCGGCATCTTT GGAAAATCGGCCTCTCGTCTGTTCCGGGCCCGCGATGCGCTCTCTCCCGTCTTCCCGCCCGTGACGTCGGGCGAC GGCTTCTACACCGACGGTTCCTTCATACAGCACAAGTCGATTCCTTACACGGGCACCTACGGCAGCGTCCTGATC AACGGCGTCGCCAAGCTGACGACGCTGCTGGCGGGCTCCGAGTGGGCCGTCACCGACGACCGCTTCCAGCTCTTG CTCGACACCGTCGAAAAGTCCTTTGCCCCCTTCATCTACAACGGCCTCGTCATGGATGGCGTCTCCGGCAGGGCC GTCAGTCGGCTGTCGACCGATCATACTCGCGGTCACAGCATCCTCGAGAGCATCTTGCTGCTGACGGACAGCGCC TCGGCCGACGAGAGAGCTCGGTGGAAGGCCATGGTCAAGGGCTGGATCGTTCGGGACCAGTACGCTCCCGTGTGG TCCGACACGGCCATGACCATCGCCGAACTGGCCCGGCTCAAGAAGCTAGTCGACGATGAGACGGTAGCGGCCGCT CCGGAGCCGACGACCGGCCACTCCGTATTCTCCAGCATGGACCGTGTCGTCCATCGCCGGCCGGGCTGGGCCGCC AGCGTCAGCATGTCCTCGGTCCGCACCAGCTTCTACGAGACCGGCAACGGCGAGAACAAGCGCGGCTGGCACGCC AACAGCGGCATGCTCTACTGGTGGACGGCCGACGGCCTCGGTCAGTATTCCGACCGCTTCTGGCCCACCGTCGAC CCTTATCGTCTTCCCGGTACCACCGTCTCCCGGAAGCCGCTGGCCGACGGCGCCGGCGGCAAGTGGGGCCGGGAC ATGCCGGATGCCGAGTGGGTCGGCGGCGCCACCGACGGCGAGTTCGGGGCCATCGGTCAAGACGTTCGCGGTCTG GAGAGCAGCCTTCGGGGCCACAAGTCGTGGTTCTTTCTCGCCGACGTCATCGTCTGCCTGGGCGCCGGCCTGTCC AGCACCGATGGAGAAGTGGTCGAGACGACGTACGACAACCGCAACCTCGGCGCTTCCGGCACCGACATGATACTC ACCGTAGACGGCCTTCGGCAGCCGTCGTCGACGGTAGGGAACTCACTGGAGTTGGTAGGCGCAAGCTGGGCTCAC CTCCAACACTCCGGCGGTTACCTCTTCCTCGATGACGGTGCCGTCATCGCTCTCCGCGAGGCTCGAACCGGCAGC CGGCGAGACATCGATGACGAAGGCAGCCCCACCACCTTCACCCGTACCTACCTCGGCCTCTACCGCCATCACGGC ATCGACCCGACCAACAGCAGCTACGCCTACGCCGTCCTTCCGGGCGCCACCGCCAACCAGACCCGAGCCGCCGTA GGCTCCGTCCAGGTAGTCGAGAATGGCGCCGACATACAAGCCGTTCGCATCGGTGACGTCTTTGCCGCAAACTTC TTCGCCCCCGGCGTCGTCGGAGCGCTCCGTGTCTCGGCCCCTTGCAGCGTTCTGATCCGGGCGTCGACCGTCTAC ATCGCCGACCCGACCAGGTCCATCAATAATACCATCCAGGTCGAGTGGCAAAACAAGACTCGCTCCGTGAGCCTT GACGGCAAGGCGGGCGCCACTGTTTCCTTGGACTTTTCTATCCCCTTCCTTCCATCACCAGCCATTCCAGCCAGT ATATGA |
| Gene | >Ophio5|5202 ATGAGACTCGACCTTCTCGTCACCAGCCTGTTGGCGTTGAAAAGTGTGAACAGAGCGCTGGCAAGGCCGACGACA GACGAGCCCAACCTCGCCCTTCGGAGGCCAAGCCAACGAGATTGGTCGACGGTTGATTCTGCGGGAAATGAGAAG CCGACGTACGCGTCTGGGGATAGCTTCGACAGATTGCGGCAGCGCTGGCGCGATATGATTCTCGGTACTGACTTT CCCGCCCAGTCGAAGCCGTTCAAGTCTCTTCTCCTGTCTCTCGGGAGGAGAGCGGCCCGGTTCGGCGATGGCTTC GCCCCGGCCTCCGGATGGCTCTGGCCCGATCTGGTCTACGCCGACGCCGGAGCGGAGACGACGGCGTCGCAGCAG TCTTCGGCCATCACCAAGAGCTTTAGAAGGCTGCTCGTCATGGCACACGCCTGGGCTCAGCCCGGCACCGGCCTC ACGGGCGACTCGGACCTACTGAGCGTCATCCTCAGGGGCGTCGACCAGTTACGGCGAGATGTCTACAATCCGTCG CAGGAACCGTTTGGAAACTGGTGGAACTGGAAGATTGGCATCCCGGACATCTTGATGGACTTGTGCGCCATCCTC TATCACCAACTCGGTGCTGAACGCATCGCCGACCTGGTGGCGGCCAACCAACACTTCGTTCCCGGCTCCGCCATC GCCTCCTATCTCGGATCCAGCACGGGAGCGAACCGCATCAGCCAATGTCGCTCCGTCGTCTTTTCCGGCATCTTT GGAAAATCGGCCTCTCGTCTGTTCCGGGCCCGCGATGCGCTCTCTCCCGTCTTCCCGCCCGTGACGTCGGGCGAC GGCTTCTACACCGACGGTTCCTTCATACAGCACAAGTCGATTCCTTACACGGGCACCTACGGCAGCGTCCTGATC AACGGCGTCGCCAAGCTGACGACGCTGCTGGCGGGCTCCGAGTGGGCCGTCACCGACGACCGCTTCCAGCTCTTG CTCGACACCGTCGAAAAGTCCTTTGCCCCCTTCATCTACAACGGCCTCGTCATGGATGGCGTCTCCGGCAGGGCC GTCAGTCGGCTGTCGACCGATCATACTCGCGGTCACAGCATCCTCGAGAGCATCTTGCTGCTGACGGACAGCGCC TCGGCCGACGAGAGAGCTCGGTGGAAGGCCATGGTCAAGGGCTGGATCGTTCGGGACCAGTACGCTCCCGTGTGG TCCGACACGGCCATGACCATCGCCGAACTGGCCCGGCTCAAGAAGCTAGTCGACGATGAGACGGTAGCGGCCGCT CCGGAGCCGACGACCGGCCACTCCGTATTCTCCAGCATGGACCGTGTCGTCCATCGCCGGCCGGGCTGGGCCGCC AGCGTCAGCATGTCCTCGGTCCGCACCAGCTTCTACGAGACCGGCAACGGCGAGAACAAGCGCGGCTGGCACGCC AACAGCGGCATGCTCTACTGGTGGACGGCCGACGGCCTCGGTCAGTATTCCGACCGCTTCTGGCCCACCGTCGAC CCTTATCGTCTTCCCGGTACCACCGTCTCCCGGAAGCCGCTGGCCGACGGCGCCGGCGGCAAGTGGGGCCGGGAC ATGCCGGATGCCGAGTGGGTCGGCGGCGCCACCGACGGCGAGTTCGGGGCCATCGGTCAAGACGTTCGCGGTCTG GAGAGCAGCCTTCGGGGCCACAAGTCGTGGTTCTTTCTCGCCGACGTCATCGTCTGCCTGGGCGCCGGCCTGTCC AGCACCGATGGAGAAGTGGTCGAGACGACGTACGACAACCGCAACCTCGGCGCTTCCGGCACCGACATGATACTC ACCGTAGACGGCCTTCGGCAGCCGTCGTCGACGGTAGGGAACTCACTGGAGTTGGTAGGCGCAAGCTGGGCTCAC CTCCAACACTCCGGCGGTTACCTCTTCCTCGATGACGGTGCCGTCATCGCTCTCCGCGAGGCTCGAACCGGCAGC CGGCGAGACATCGATGACGAAGGCAGCCCCACCACCTTCACCCGTACCTACCTCGGCCTCTACCGCCATCACGGC ATCGACCCGACCAACAGCAGCTACGCCTACGCCGTCCTTCCGGGCGCCACCGCCAACCAGACCCGAGCCGCCGTA GGCTCCGTCCAGGTAGTCGAGAATGGCGCCGACATACAAGCCGTTCGCATCGGTGACGTCTTTGCCGCAAACTTC TTCGCCCCCGGCGTCGTCGGAGCGCTCCGTGTCTCGGCCCCTTGCAGCGTTCTGATCCGGGCGTCGACCGTCTAC ATCGCCGACCCGACCAGGTCCATCAATAATACCATCCAGGTCGAGTGGCAAAACAAGACTCGCTCCGTGAGCCTT GACGGCAAGGCGGGCGCCACTGTTTCCTTGGACTTTTCTATCCCCTTCCTTCCATCACCAGCCATTCCAGCCAGT ATATGA |