Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|5127
Gene name
Location	scaffold_411:10633..11274
Strand	-
Gene length (bp)	641
Transcript length (bp)	453
Coding sequence length (bp)	450
Protein length (aa)	150

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08570	DUF1761	Protein of unknown function (DUF1761)	6.4E-24	13	139

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9UTI9\|YKZ2_SCHPO	UPF0591 membrane protein C15E1.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC15E1.02c PE=3 SV=1	2	145	3.0E-22

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 43	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	15	37	22
2	58	80	22
3	90	112	22
4	121	143	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|5127 MSLHYLPPVKPSAIAVGLAFSQSVELAVLAPIFGQTYQRAKAASTKEEFLRSREAAGAASAWGTSFVGAAMQAYG VAALINATGTLSYKGAAYLGGLIFTATAVPTYMAQVFTEKRPLDTVGVSVAAKLCETIGLSVFLTWWGTRTNPFD
Coding	>Ophio5\|5127 ATGTCTCTGCACTACCTCCCCCCCGTCAAGCCTTCGGCCATCGCCGTCGGCCTCGCCTTCAGCCAGAGCGTTGAG CTCGCTGTCCTGGCTCCCATTTTCGGCCAGACTTACCAGCGCGCCAAGGCGGCCAGCACCAAGGAAGAGTTCCTC CGCTCGCGTGAGGCTGCCGGTGCCGCTTCGGCTTGGGGCACCAGCTTCGTCGGTGCTGCTATGCAGGCTTACGGC GTTGCCGCCCTCATCAACGCTACCGGCACTTTGAGCTACAAGGGCGCTGCTTACCTTGGCGGGCTCATCTTTACT GCTACGGCTGTGCCTACTTATATGGCTCAGGTGTTTACGGAGAAGAGACCCCTCGACACCGTTGGCGTCAGCGTC GCGGCCAAGCTTTGTGAGACGATTGGCTTGTCTGTCTTCTTGACCTGGTGGGGGACGCGTACCAACCCCTTCGAC
Transcript	>Ophio5\|5127 ATGTCTCTGCACTACCTCCCCCCCGTCAAGCCTTCGGCCATCGCCGTCGGCCTCGCCTTCAGCCAGAGCGTTGAG CTCGCTGTCCTGGCTCCCATTTTCGGCCAGACTTACCAGCGCGCCAAGGCGGCCAGCACCAAGGAAGAGTTCCTC CGCTCGCGTGAGGCTGCCGGTGCCGCTTCGGCTTGGGGCACCAGCTTCGTCGGTGCTGCTATGCAGGCTTACGGC GTTGCCGCCCTCATCAACGCTACCGGCACTTTGAGCTACAAGGGCGCTGCTTACCTTGGCGGGCTCATCTTTACT GCTACGGCTGTGCCTACTTATATGGCTCAGGTGTTTACGGAGAAGAGACCCCTCGACACCGTTGGCGTCAGCGTC GCGGCCAAGCTTTGTGAGACGATTGGCTTGTCTGTCTTCTTGACCTGGTGGGGGACGCGTACCAACCCCTTCGAC TGA
Gene	>Ophio5\|5127 ATGTCTCTGCACTGTAAGTCGAGCAATGTTCTCTGCTGTCAAGCTCGCCTCCCGGGTGATAGCGACCGCTCTCTG ACGAGTCAACGTTGGCAAAAAAAAAAAAAAAAAGACCTCCCCCCCGTCAAGCCTTCGGCCATCGCCGTCGGCCTC GCCTTCAGCCAGAGCGTTGAGCTCGCTGTCCTGGCTCCCATTTTCGGCCAGACTTACCAGCGCGCCAAGGCGGCC AGCACCAAGGAAGAGTTCCTCCGCTCGCGTGAGGCTGCCGGTGCCGCTTCGGCTTGGGGCACCAGCTTCGTCGGT GCTGCTATGCAGGCTTACGGCGTTGCCGCCCTCATCAACGCTACCGGCACTTTGAGCTACAAGGGCGCTGCTTAC CTTGGCGGGCTCATCTTTACTGCTACGGCTGTGCCTACTGTGCGTCGAGAAACCCTTTTTTTTTTTCCGCCTTTG TTGGGCTTGGCTTGCCCATCGTTTCACCCCTTCTAACTGACGTCGTTGCTATTCAGTATATGGCTCAGGTGTTTA CGGAGAAGAGACCCCTCGACACCGTTGGCGTCAGCGTCGCGGCCAAGCTTTGTGAGACGATTGGCTTGTCTGTCT TCTTGACCTGGTGGGGGACGCGTACCAACCCCTTCGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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