Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5080
Gene name
Locationscaffold_409:1615..2628
Strand-
Gene length (bp)1013
Transcript length (bp)957
Coding sequence length (bp)954
Protein length (aa) 318

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01375 Enterotoxin_a Heat-labile enterotoxin alpha chain 1.3E-32 39 242

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P43528|E2BA_ECOLX Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 35 204 2.0E-19
sp|A2PU44|CHELT_VIBCL NAD(+)--arginine ADP-ribosyltransferase Chelt OS=Vibrio cholerae GN=A51_B1772 PE=1 SV=1 40 216 1.0E-18
sp|P43530|ELAH_ECOH1 Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 39 251 6.0E-18
sp|P06717|ELAP_ECOLX Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 39 264 6.0E-18
sp|P01555|CHTA_VIBCH Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 39 217 1.0E-17
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P43528|E2BA_ECOLX Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 35 204 2.0E-19
sp|A2PU44|CHELT_VIBCL NAD(+)--arginine ADP-ribosyltransferase Chelt OS=Vibrio cholerae GN=A51_B1772 PE=1 SV=1 40 216 1.0E-18
sp|P43530|ELAH_ECOH1 Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 39 251 6.0E-18
sp|P06717|ELAP_ECOLX Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 39 264 6.0E-18
sp|P01555|CHTA_VIBCH Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 39 217 1.0E-17
sp|P13810|E2AA_ECOLX Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1 40 216 7.0E-17
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GO

GO Term Description Terminal node
GO:0090729 toxin activity Yes
GO:0005615 extracellular space Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5080
MLSRLSLLLPWLLLAGSWLPLTHSRSSTLGPSNDHVHIVYRVDQRSPRQIRYAGGFSPRGVDGNGFLRPPPDTSL
FNHVRGEGWMSRNNSGYVSTTSSLGVALHILRESGTVPGYIYHIHVTPNFINVARTLGDYYEHQGELEFAALGGI
LWTQVLAWQRIEEAAGTPNGYHVSERVLNPDYHSQLFDWASDGGAQFQLAGFPDDHVVLRQRLDPWCRDGRQKKR
AVMRKRAPIRCPMAQESPKALATKYMASIMQVGKLYVYARVSPNSWAGTTDSVFVMVGNSKPTLLFKNPYPGKAQ
PHEHQSPGPAFVASHSVG
Coding >Ophio5|5080
ATGCTCTCTCGCCTATCCCTTCTTCTCCCTTGGCTTCTTTTGGCCGGCTCATGGCTCCCTCTTACCCACAGCAGG
AGCTCGACGCTAGGACCGAGCAACGATCATGTGCACATCGTCTACCGAGTAGACCAACGGTCTCCCAGGCAGATC
AGGTACGCGGGGGGCTTCTCACCGCGGGGCGTAGATGGCAACGGCTTTCTGCGACCACCGCCCGACACCAGTCTA
TTCAACCACGTGCGCGGAGAGGGATGGATGAGCCGCAATAACTCAGGCTACGTCTCGACGACGTCGAGTCTAGGT
GTGGCACTTCACATCCTTCGTGAGAGCGGAACCGTTCCCGGCTACATCTATCATATACACGTCACCCCCAACTTC
ATCAACGTGGCTCGCACCCTCGGCGACTACTACGAACATCAGGGCGAGCTCGAGTTCGCGGCCTTGGGAGGCATT
CTCTGGACCCAGGTTCTCGCCTGGCAGAGAATCGAGGAAGCCGCCGGGACGCCGAATGGCTATCATGTGAGTGAG
CGTGTTCTCAACCCAGACTATCACTCGCAACTATTCGACTGGGCTTCCGACGGTGGCGCCCAATTTCAGCTCGCC
GGCTTTCCCGACGATCATGTGGTGCTACGCCAGAGGTTGGATCCCTGGTGTAGAGACGGTAGGCAGAAGAAGAGA
GCGGTGATGAGGAAGCGGGCACCTATCCGTTGCCCCATGGCCCAAGAGTCGCCCAAGGCCTTGGCTACCAAGTAC
ATGGCCTCGATCATGCAAGTCGGTAAACTCTACGTCTACGCACGCGTCTCGCCCAATTCCTGGGCCGGAACTACA
GACAGCGTGTTTGTCATGGTGGGCAACTCGAAACCGACTCTCTTGTTCAAGAATCCCTACCCGGGCAAGGCGCAA
CCTCACGAGCATCAGTCTCCTGGTCCAGCCTTTGTTGCATCCCATAGCGTCGGA
Transcript >Ophio5|5080
ATGCTCTCTCGCCTATCCCTTCTTCTCCCTTGGCTTCTTTTGGCCGGCTCATGGCTCCCTCTTACCCACAGCAGG
AGCTCGACGCTAGGACCGAGCAACGATCATGTGCACATCGTCTACCGAGTAGACCAACGGTCTCCCAGGCAGATC
AGGTACGCGGGGGGCTTCTCACCGCGGGGCGTAGATGGCAACGGCTTTCTGCGACCACCGCCCGACACCAGTCTA
TTCAACCACGTGCGCGGAGAGGGATGGATGAGCCGCAATAACTCAGGCTACGTCTCGACGACGTCGAGTCTAGGT
GTGGCACTTCACATCCTTCGTGAGAGCGGAACCGTTCCCGGCTACATCTATCATATACACGTCACCCCCAACTTC
ATCAACGTGGCTCGCACCCTCGGCGACTACTACGAACATCAGGGCGAGCTCGAGTTCGCGGCCTTGGGAGGCATT
CTCTGGACCCAGGTTCTCGCCTGGCAGAGAATCGAGGAAGCCGCCGGGACGCCGAATGGCTATCATGTGAGTGAG
CGTGTTCTCAACCCAGACTATCACTCGCAACTATTCGACTGGGCTTCCGACGGTGGCGCCCAATTTCAGCTCGCC
GGCTTTCCCGACGATCATGTGGTGCTACGCCAGAGGTTGGATCCCTGGTGTAGAGACGGTAGGCAGAAGAAGAGA
GCGGTGATGAGGAAGCGGGCACCTATCCGTTGCCCCATGGCCCAAGAGTCGCCCAAGGCCTTGGCTACCAAGTAC
ATGGCCTCGATCATGCAAGTCGGTAAACTCTACGTCTACGCACGCGTCTCGCCCAATTCCTGGGCCGGAACTACA
GACAGCGTGTTTGTCATGGTGGGCAACTCGAAACCGACTCTCTTGTTCAAGAATCCCTACCCGGGCAAGGCGCAA
CCTCACGAGCATCAGTCTCCTGGTCCAGCCTTTGTTGCATCCCATAGCGTCGGATAA
Gene >Ophio5|5080
ATGCTCTCTCGCCTATCCCTTCTTCTCCCTTGGCTTCTTTTGGCCGGCTCATGGCTCCCTCTTACCCACAGCAGG
AGCTCGACGCTAGGACCGAGCAACGATCATGTGCACATCGTCTACCGAGTAGACCAACGGTCTCCCAGGCAGATC
AGGTACGCGGGGGGCTTCTCACCGCGGGGCGTAGATGGCAACGGCTTTCTGCGACCACCGCCCGACACCAGTCTA
TTCAACCACGTGCGCGGAGAGGGATGGATGAGCCGCAATAACTCAGGCTACGTCTCGACGACGTCGAGTCTAGGT
GTGGCACTTCACATCCTTCGTGAGAGCGGAACCGTTCCCGGCTACATCTATCATATACACGTCACCCCCAACTTC
ATCAACGTGGCTCGCACCCTCGGCGACTACTACGAACATCAGGGCGAGCTCGAGTTCGCGGCCTTGGGAGGCATT
CTCTGGACCCAGGTTCTCGCCTGGCAGAGAATCGAGGAAGCCGCCGGGACGCCGAATGGCTATCATGTGAGTGAG
CGTGTTCTCAACCCAGACTATCACTCGCAACTATTCGACTGGGCTTCCGACGGTGGCGCCCAATTTCAGCTCGCC
GGCTTTCCCGACGATCATGTGGTGCTACGCCAGAGGTTGGATCCCTGGTGTAGAGACGGTAGGCAGAAGAAGAGA
GCGGTGATGAGGAAGCGGGCACCTATCCGTTGCCCCATGGCCCAAGAGTCGCCCAAGGCCTTGGCTACCAAGTAC
ATGGCCTCGATCATGCAAGTCGGTAAACTCTACGTCTACGCACGCGTCTCGCCCAATTCCTGGGCCGGAACTACA
GACAGCGTGTTTGTCATGGTGGGCAACTCGAAACCGACTCTCTTGTTCAAGAATCCCTACCCGGGCAAGGCGGTC
GGTGTGTCGATTAATATTGAGAGGTCGTTTGGAACGGAAGACGTCTTCATCAGCAACCTCACGAGCATCAGTCTC
CTGGTCCAGCCTTTGTTGCATCCCATAGCGTCGGATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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