© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|5076 |
| Gene name | |
| Location | scaffold_408:13823..15034 |
| Strand | + |
| Gene length (bp) | 1211 |
| Transcript length (bp) | 1152 |
| Coding sequence length (bp) | 1149 |
| Protein length (aa) | 383 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1022 | 0.0689 | 0.9646 | 0.0488 | 0.0645 | 0.0094 | 0.1991 | 0.0844 | 0.2108 | 0.0017 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 19 | 0.999686 |
| Orthofinder run ID | 4 |
| Orthogroup | 16015 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|5076 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5076 MKSVFTLGTCLILVGVAVATPVQVSTGIERRQDKESGYVPSFLHEDAEQWREAQERREKERIGRLPDLKTRPKQR ENSGRPAQNSQPPPYRLPYFNTGPKSQGYQPSFPNNQHPQTFQNPQFPQRGQYPDYPPNYFQNPQFSQQGSHPDH PPPFQNPQFPQPFPNPGRGSPPPRSWQSPQRYPETELRPPSQSPSQGKGAGSSISRPQKATPQKKPSISRTETAT VTSQTANPAVSKYPQRPSTAGGRPSCMPSSSDVSNQPTRSQKTEGFQPVRGADMPATLASGPCNQTSVTPPMKNS ISNSPQTSHKEKAKAGDKQPGAMSAQPVRTATPSTENTTLPMKNLAGNLSPASEKPKAVACPEPDSTSPKVEPQS GYIPKGSD |
| Coding | >Ophio5|5076 ATGAAAAGCGTCTTTACACTAGGCACATGCCTCATTCTCGTCGGGGTGGCTGTAGCCACGCCCGTTCAAGTCTCG ACGGGGATCGAGCGGCGTCAAGATAAGGAATCTGGATACGTGCCGAGCTTTCTCCATGAAGATGCCGAACAATGG AGGGAGGCTCAGGAGCGGAGGGAGAAAGAACGGATAGGACGACTACCGGACTTGAAAACACGTCCAAAGCAGCGA GAGAATAGTGGCCGCCCTGCCCAGAATTCTCAACCGCCTCCATATCGCCTTCCCTATTTTAACACAGGCCCAAAA TCTCAGGGTTATCAGCCGTCTTTCCCCAATAATCAACATCCGCAGACTTTCCAGAATCCCCAATTCCCTCAACGA GGCCAATATCCGGATTACCCGCCCAATTATTTCCAAAATCCCCAGTTCTCTCAACAAGGCTCACATCCGGATCAC CCTCCTCCTTTCCAGAATCCTCAATTCCCTCAACCATTTCCAAATCCAGGTCGCGGTTCCCCCCCTCCTCGGAGT TGGCAGTCCCCTCAGAGGTACCCAGAAACGGAACTCCGCCCCCCCTCTCAATCTCCATCACAAGGTAAAGGGGCG GGTTCATCAATCTCACGACCACAAAAGGCTACTCCGCAAAAAAAGCCTTCCATTTCGAGAACGGAGACGGCGACG GTGACCTCACAAACGGCTAATCCTGCCGTCAGCAAGTACCCCCAGCGTCCATCAACGGCCGGAGGGCGGCCGTCT TGCATGCCGTCGTCTTCGGATGTGTCTAATCAACCCACTCGGAGTCAGAAGACAGAGGGTTTTCAGCCAGTCCGA GGTGCCGACATGCCTGCGACCTTGGCTTCGGGCCCTTGCAACCAGACCAGCGTGACTCCGCCCATGAAGAACTCC ATCTCCAACTCCCCTCAGACTTCTCATAAGGAGAAAGCAAAGGCTGGGGACAAACAACCAGGTGCAATGTCTGCG CAGCCTGTGCGGACTGCTACGCCATCCACTGAAAATACGACTCTGCCCATGAAGAACTTAGCCGGCAACCTCTCC CCAGCGTCTGAGAAGCCAAAGGCGGTTGCCTGTCCCGAACCCGATTCGACGTCACCGAAAGTCGAGCCGCAGTCT GGATATATACCGAAAGGTAGTGAC |
| Transcript | >Ophio5|5076 ATGAAAAGCGTCTTTACACTAGGCACATGCCTCATTCTCGTCGGGGTGGCTGTAGCCACGCCCGTTCAAGTCTCG ACGGGGATCGAGCGGCGTCAAGATAAGGAATCTGGATACGTGCCGAGCTTTCTCCATGAAGATGCCGAACAATGG AGGGAGGCTCAGGAGCGGAGGGAGAAAGAACGGATAGGACGACTACCGGACTTGAAAACACGTCCAAAGCAGCGA GAGAATAGTGGCCGCCCTGCCCAGAATTCTCAACCGCCTCCATATCGCCTTCCCTATTTTAACACAGGCCCAAAA TCTCAGGGTTATCAGCCGTCTTTCCCCAATAATCAACATCCGCAGACTTTCCAGAATCCCCAATTCCCTCAACGA GGCCAATATCCGGATTACCCGCCCAATTATTTCCAAAATCCCCAGTTCTCTCAACAAGGCTCACATCCGGATCAC CCTCCTCCTTTCCAGAATCCTCAATTCCCTCAACCATTTCCAAATCCAGGTCGCGGTTCCCCCCCTCCTCGGAGT TGGCAGTCCCCTCAGAGGTACCCAGAAACGGAACTCCGCCCCCCCTCTCAATCTCCATCACAAGGTAAAGGGGCG GGTTCATCAATCTCACGACCACAAAAGGCTACTCCGCAAAAAAAGCCTTCCATTTCGAGAACGGAGACGGCGACG GTGACCTCACAAACGGCTAATCCTGCCGTCAGCAAGTACCCCCAGCGTCCATCAACGGCCGGAGGGCGGCCGTCT TGCATGCCGTCGTCTTCGGATGTGTCTAATCAACCCACTCGGAGTCAGAAGACAGAGGGTTTTCAGCCAGTCCGA GGTGCCGACATGCCTGCGACCTTGGCTTCGGGCCCTTGCAACCAGACCAGCGTGACTCCGCCCATGAAGAACTCC ATCTCCAACTCCCCTCAGACTTCTCATAAGGAGAAAGCAAAGGCTGGGGACAAACAACCAGGTGCAATGTCTGCG CAGCCTGTGCGGACTGCTACGCCATCCACTGAAAATACGACTCTGCCCATGAAGAACTTAGCCGGCAACCTCTCC CCAGCGTCTGAGAAGCCAAAGGCGGTTGCCTGTCCCGAACCCGATTCGACGTCACCGAAAGTCGAGCCGCAGTCT GGATATATACCGAAAGGTAGTGACTGA |
| Gene | >Ophio5|5076 ATGAAAAGCGTCTTTACACTAGGCACATGCCTCATTCTCGTCGGGGTGGCTGTAGCCACGCCCGTTCAAGTCTCG ACGGGGATCGAGCGGCGTCAAGGTATGTCTTGGGTCTTTTGGAGAATTTTGCTGCTTGCTCCGAGACTTATTCGG CGATAGATAAGGAATCTGGATACGTGCCGAGCTTTCTCCATGAAGATGCCGAACAATGGAGGGAGGCTCAGGAGC GGAGGGAGAAAGAACGGATAGGACGACTACCGGACTTGAAAACACGTCCAAAGCAGCGAGAGAATAGTGGCCGCC CTGCCCAGAATTCTCAACCGCCTCCATATCGCCTTCCCTATTTTAACACAGGCCCAAAATCTCAGGGTTATCAGC CGTCTTTCCCCAATAATCAACATCCGCAGACTTTCCAGAATCCCCAATTCCCTCAACGAGGCCAATATCCGGATT ACCCGCCCAATTATTTCCAAAATCCCCAGTTCTCTCAACAAGGCTCACATCCGGATCACCCTCCTCCTTTCCAGA ATCCTCAATTCCCTCAACCATTTCCAAATCCAGGTCGCGGTTCCCCCCCTCCTCGGAGTTGGCAGTCCCCTCAGA GGTACCCAGAAACGGAACTCCGCCCCCCCTCTCAATCTCCATCACAAGGTAAAGGGGCGGGTTCATCAATCTCAC GACCACAAAAGGCTACTCCGCAAAAAAAGCCTTCCATTTCGAGAACGGAGACGGCGACGGTGACCTCACAAACGG CTAATCCTGCCGTCAGCAAGTACCCCCAGCGTCCATCAACGGCCGGAGGGCGGCCGTCTTGCATGCCGTCGTCTT CGGATGTGTCTAATCAACCCACTCGGAGTCAGAAGACAGAGGGTTTTCAGCCAGTCCGAGGTGCCGACATGCCTG CGACCTTGGCTTCGGGCCCTTGCAACCAGACCAGCGTGACTCCGCCCATGAAGAACTCCATCTCCAACTCCCCTC AGACTTCTCATAAGGAGAAAGCAAAGGCTGGGGACAAACAACCAGGTGCAATGTCTGCGCAGCCTGTGCGGACTG CTACGCCATCCACTGAAAATACGACTCTGCCCATGAAGAACTTAGCCGGCAACCTCTCCCCAGCGTCTGAGAAGC CAAAGGCGGTTGCCTGTCCCGAACCCGATTCGACGTCACCGAAAGTCGAGCCGCAGTCTGGATATATACCGAAAG GTAGTGACTGA |