Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5071
Gene name
Locationscaffold_407:17209..17906
Strand+
Gene length (bp)697
Transcript length (bp)573
Coding sequence length (bp)570
Protein length (aa) 190

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06127 Mpo1-like 2-hydroxy-palmitic acid dioxygenase Mpo1-like 2.4E-27 4 159

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O13737|YDR2_SCHPO Uncharacterized endoplasmic reticulum membrane protein C16E8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC16E8.02 PE=4 SV=2 5 176 7.0E-28
sp|P25338|YGB0_YEAST Uncharacterized endoplasmic reticulum membrane protein YGL010W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGL010W PE=1 SV=2 3 185 3.0E-27

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Peroxisomal targeting signal 0.2703 0.0711 0.1211 0.0921 0.1858 0.0504 0.8156 0.151 0.2835 0.163

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 21 43 22
2 63 85 22
3 106 125 19
4 140 157 17

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup5436
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3695
Ophiocordyceps australis map64 (Brazil) OphauB2|2230
Ophiocordyceps camponoti-floridani Ophcf2|04562
Ophiocordyceps camponoti-rufipedis Ophun1|7563
Ophiocordyceps kimflemingae Ophio5|5071 (this protein)
Ophiocordyceps subramaniannii Hirsu2|5972

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5071
MSLDLEKHLTFYGAYHHNSVNVAIHMVCVPLILVSAFCMATYTGTLIHTPPWLTMPYLDLNLGTIAALVYASLYI
LLEPVAGFVLAAFCVGSAAFANHLRAEAPQATFRAALIVHIVSWIAQFIGHGKFEGRAPALLDNLIQAIFLAPMF
VWLELLFKLGYRKELQSRVEKAVQVEIAKFRSQTKNGKAH
Coding >Ophio5|5071
ATGTCGCTAGACCTCGAAAAGCACCTGACCTTTTATGGCGCCTATCACCACAACTCGGTCAACGTGGCCATCCAC
ATGGTCTGCGTGCCGCTCATCCTCGTCTCGGCCTTTTGCATGGCTACCTACACCGGCACCCTGATCCATACGCCC
CCTTGGCTCACCATGCCCTACCTCGACCTCAACTTGGGCACCATAGCTGCCCTCGTCTATGCCTCTCTATACATC
CTGCTCGAGCCCGTCGCTGGCTTCGTGCTCGCCGCATTCTGCGTCGGAAGCGCCGCCTTTGCCAACCACCTGCGC
GCCGAGGCTCCCCAAGCCACCTTTCGCGCCGCCCTCATCGTTCATATCGTTTCTTGGATCGCCCAGTTCATCGGT
CATGGAAAATTCGAGGGTCGTGCCCCCGCACTGCTCGATAACTTGATCCAGGCCATCTTCCTCGCCCCCATGTTC
GTATGGCTCGAGCTGCTCTTCAAGCTCGGCTATCGCAAGGAGCTGCAGAGCCGCGTCGAAAAGGCTGTTCAGGTC
GAGATCGCCAAATTCAGGTCCCAGACGAAGAACGGCAAGGCTCAC
Transcript >Ophio5|5071
ATGTCGCTAGACCTCGAAAAGCACCTGACCTTTTATGGCGCCTATCACCACAACTCGGTCAACGTGGCCATCCAC
ATGGTCTGCGTGCCGCTCATCCTCGTCTCGGCCTTTTGCATGGCTACCTACACCGGCACCCTGATCCATACGCCC
CCTTGGCTCACCATGCCCTACCTCGACCTCAACTTGGGCACCATAGCTGCCCTCGTCTATGCCTCTCTATACATC
CTGCTCGAGCCCGTCGCTGGCTTCGTGCTCGCCGCATTCTGCGTCGGAAGCGCCGCCTTTGCCAACCACCTGCGC
GCCGAGGCTCCCCAAGCCACCTTTCGCGCCGCCCTCATCGTTCATATCGTTTCTTGGATCGCCCAGTTCATCGGT
CATGGAAAATTCGAGGGTCGTGCCCCCGCACTGCTCGATAACTTGATCCAGGCCATCTTCCTCGCCCCCATGTTC
GTATGGCTCGAGCTGCTCTTCAAGCTCGGCTATCGCAAGGAGCTGCAGAGCCGCGTCGAAAAGGCTGTTCAGGTC
GAGATCGCCAAATTCAGGTCCCAGACGAAGAACGGCAAGGCTCACTAG
Gene >Ophio5|5071
ATGTCGCTAGACCTCGAAAAGCACCTGACCTTTGTGCGTGCCGCTCGCCCCCTTCACCTCATCCCCCCCCCCCCC
CCGGACTCCCGCTGACTCGGCTCGACAGTATGGCGCCTATCACCACAACTCGGTCAACGTGGCCATCCACATGGT
CTGCGTGCCGCTCATCCTCGTCTCGGCCTTTTGCATGGTACGACGGTCCTCTATTCCAGCTTCTATTCCACGCCC
GTAACCTTGCTGCCAGGCTACCTACACCGGCACCCTGATCCATACGCCCCCTTGGCTCACCATGCCCTACCTCGA
CCTCAACTTGGGCACCATAGCTGCCCTCGTCTATGCCTCTCTATACATCCTGCTCGAGCCCGTCGCTGGCTTCGT
GCTCGCCGCATTCTGCGTCGGAAGCGCCGCCTTTGCCAACCACCTGCGCGCCGAGGCTCCCCAAGCCACCTTTCG
CGCCGCCCTCATCGTTCATATCGTTTCTTGGATCGCCCAGTTCATCGGTCATGGAAAATTCGAGGGTCGTGCCCC
CGCACTGCTCGATAACTTGATCCAGGCCATCTTCCTCGCCCCCATGTTCGTATGGCTCGAGCTGCTCTTCAAGCT
CGGCTATCGCAAGGAGCTGCAGAGCCGCGTCGAAAAGGCTGTTCAGGTCGAGATCGCCAAATTCAGGTCCCAGAC
GAAGAACGGCAAGGCTCACTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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