© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophio5|5068 |
| Gene name | |
| Location | scaffold_407:12602..12982 |
| Strand | + |
| Gene length (bp) | 380 |
| Transcript length (bp) | 330 |
| Coding sequence length (bp) | 327 |
| Protein length (aa) | 109 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05768 | Glrx-like | Glutaredoxin-like domain (DUF836) | 8.8E-12 | 12 | 99 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9CWB7|YD286_MOUSE | Glutaredoxin-like protein C5orf63 homolog OS=Mus musculus PE=1 SV=1 | 13 | 104 | 3.0E-09 |
| sp|Q05530|YD286_YEAST | Glutaredoxin-like protein YDR286C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR286C PE=3 SV=1 | 1 | 105 | 6.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|5068 MFASRRLLQACRITFFTRENCGLCAEAGATLSNVANNRPFVYVKVDLARPESRLWRELYDFDIPVIHISRASAEP EEVATASKAVKLMHRFTSAQIEAKMDQVEAAKDQ |
| Coding | >Ophio5|5068 ATGTTCGCATCAAGGCGTCTCCTTCAGGCCTGCAGAATCACCTTCTTCACCCGCGAGAATTGCGGACTCTGCGCC GAGGCTGGAGCCACGCTGTCGAATGTGGCCAACAACAGGCCGTTCGTCTACGTCAAGGTGGACCTGGCACGACCA GAGTCCCGGCTATGGCGGGAGCTGTACGACTTTGATATCCCCGTTATTCATATCAGTAGGGCCTCCGCCGAGCCA GAGGAGGTGGCTACCGCCAGCAAGGCCGTCAAATTGATGCACCGTTTCACATCTGCCCAGATCGAGGCTAAGATG GACCAGGTCGAGGCAGCTAAAGACCAA |
| Transcript | >Ophio5|5068 ATGTTCGCATCAAGGCGTCTCCTTCAGGCCTGCAGAATCACCTTCTTCACCCGCGAGAATTGCGGACTCTGCGCC GAGGCTGGAGCCACGCTGTCGAATGTGGCCAACAACAGGCCGTTCGTCTACGTCAAGGTGGACCTGGCACGACCA GAGTCCCGGCTATGGCGGGAGCTGTACGACTTTGATATCCCCGTTATTCATATCAGTAGGGCCTCCGCCGAGCCA GAGGAGGTGGCTACCGCCAGCAAGGCCGTCAAATTGATGCACCGTTTCACATCTGCCCAGATCGAGGCTAAGATG GACCAGGTCGAGGCAGCTAAAGACCAATAA |
| Gene | >Ophio5|5068 ATGTTCGCATCAAGGCGTCTCCTTCAGGCCTGCAGAATCACCTTCTTCACCCGCGAGAATTGCGGACTCTGCGCC GAGGCTGGAGCCACGCTGTCGAATGTGGCCAACAACAGGCCGTTCGTCTACGTCAAGGTGGACCTGGCACGACCA GAGTCCCGGCTATGGCGGGAGCTGTACGACTTTGATATCCCCGTTGTGAGTGCCTTTGGTCACACGGGCGATCAG TCGATTTGACTACTGGACAGATTCATATCAGTAGGGCCTCCGCCGAGCCAGAGGAGGTGGCTACCGCCAGCAAGG CCGTCAAATTGATGCACCGTTTCACATCTGCCCAGATCGAGGCTAAGATGGACCAGGTCGAGGCAGCTAAAGACC AATAA |