Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5033
Gene name
Locationscaffold_402:14917..16315
Strand+
Gene length (bp)1398
Transcript length (bp)1149
Coding sequence length (bp)1146
Protein length (aa) 382

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 61 0.5

Transmembrane Domains

Domain # Start End Length
1 10 29 19
2 41 63 22
3 100 122 22
4 134 156 22
5 182 204 22
6 217 239 22
7 259 276 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5033
MSVPDEQVPVEFWTNLVLGTALILARIIVRWRTQTFRGLAVDDFLMAAVIPLSLAGAVAGYMVEADTDGLSNAGM
TPDERAALDPNSLEFRLRTKGSRAHIYGWVLYTTLLWTLKLSWLFYYKRLGDRVDNMTLKVNLGFAFTAISYLVV
LFAILLGCQPFSKYWQINPDPGDHCHPSESDLLAWAVLWTDMTTDLFIIAIPLPMIWRTRISRRKKIGLMVMFGG
GILTVIMGALRCAFILLEGDKLGDVAARWSDREVFVAIILSTIPVLLPIIRQRFWPEKKKASISKAIYYPTTGDS
TTSRTNEDATVKLRTVSRQSTGALSLDRESLWRDSDNFSLPIMINSTPLEASVMEEVSIREVKDSEEPEEGVAEV
QDAGDRV
Coding >Ophio5|5033
ATGTCCGTACCCGACGAACAAGTGCCGGTGGAGTTTTGGACAAATCTTGTTCTTGGGACAGCCTTGATCTTGGCC
AGAATCATTGTAAGATGGAGGACTCAGACGTTTCGAGGCCTGGCCGTCGATGACTTTCTCATGGCCGCCGTCATT
CCACTCTCCTTAGCTGGTGCAGTGGCAGGATACATGGTCGAAGCCGACACGGACGGGCTGTCCAATGCCGGCATG
ACTCCCGACGAGCGCGCTGCTCTTGATCCCAACAGCCTCGAATTCCGTCTGCGAACCAAGGGCTCCAGGGCCCAT
ATCTACGGCTGGGTACTTTATACGACACTACTCTGGACACTCAAGCTGAGCTGGCTCTTTTACTACAAGCGACTC
GGTGACCGTGTCGATAATATGACGCTCAAGGTTAATCTTGGCTTCGCCTTCACGGCTATCTCCTATCTGGTGGTG
CTTTTCGCTATCCTGCTTGGTTGCCAGCCCTTCTCCAAGTATTGGCAAATTAACCCTGATCCGGGAGATCATTGC
CATCCATCTGAGTCGGATCTTCTGGCGTGGGCTGTGCTATGGACGGACATGACAACGGACTTGTTCATCATAGCC
ATCCCGCTTCCGATGATCTGGCGCACCCGCATCTCGAGGAGGAAAAAGATTGGCCTCATGGTCATGTTTGGTGGC
GGGATCCTCACCGTCATCATGGGCGCTCTCCGCTGCGCCTTCATCTTACTAGAAGGGGACAAACTAGGAGACGTG
GCGGCGAGGTGGTCCGACCGGGAAGTCTTTGTCGCCATCATTCTCTCCACCATCCCCGTTCTTCTGCCCATAATT
CGTCAAAGGTTCTGGCCGGAGAAGAAGAAAGCCAGCATCTCGAAAGCGATTTATTATCCAACCACGGGGGATTCG
ACCACTTCCCGCACCAACGAGGACGCCACTGTCAAGCTCAGGACCGTGTCCCGGCAGAGCACCGGTGCTTTGTCG
TTGGACAGAGAATCTCTGTGGAGAGACTCGGATAACTTTTCACTGCCCATCATGATTAACTCGACGCCTTTAGAG
GCTTCTGTCATGGAGGAGGTGTCCATTCGTGAGGTCAAGGACTCAGAAGAGCCTGAAGAGGGTGTGGCCGAGGTG
CAAGATGCAGGAGACAGAGTC
Transcript >Ophio5|5033
ATGTCCGTACCCGACGAACAAGTGCCGGTGGAGTTTTGGACAAATCTTGTTCTTGGGACAGCCTTGATCTTGGCC
AGAATCATTGTAAGATGGAGGACTCAGACGTTTCGAGGCCTGGCCGTCGATGACTTTCTCATGGCCGCCGTCATT
CCACTCTCCTTAGCTGGTGCAGTGGCAGGATACATGGTCGAAGCCGACACGGACGGGCTGTCCAATGCCGGCATG
ACTCCCGACGAGCGCGCTGCTCTTGATCCCAACAGCCTCGAATTCCGTCTGCGAACCAAGGGCTCCAGGGCCCAT
ATCTACGGCTGGGTACTTTATACGACACTACTCTGGACACTCAAGCTGAGCTGGCTCTTTTACTACAAGCGACTC
GGTGACCGTGTCGATAATATGACGCTCAAGGTTAATCTTGGCTTCGCCTTCACGGCTATCTCCTATCTGGTGGTG
CTTTTCGCTATCCTGCTTGGTTGCCAGCCCTTCTCCAAGTATTGGCAAATTAACCCTGATCCGGGAGATCATTGC
CATCCATCTGAGTCGGATCTTCTGGCGTGGGCTGTGCTATGGACGGACATGACAACGGACTTGTTCATCATAGCC
ATCCCGCTTCCGATGATCTGGCGCACCCGCATCTCGAGGAGGAAAAAGATTGGCCTCATGGTCATGTTTGGTGGC
GGGATCCTCACCGTCATCATGGGCGCTCTCCGCTGCGCCTTCATCTTACTAGAAGGGGACAAACTAGGAGACGTG
GCGGCGAGGTGGTCCGACCGGGAAGTCTTTGTCGCCATCATTCTCTCCACCATCCCCGTTCTTCTGCCCATAATT
CGTCAAAGGTTCTGGCCGGAGAAGAAGAAAGCCAGCATCTCGAAAGCGATTTATTATCCAACCACGGGGGATTCG
ACCACTTCCCGCACCAACGAGGACGCCACTGTCAAGCTCAGGACCGTGTCCCGGCAGAGCACCGGTGCTTTGTCG
TTGGACAGAGAATCTCTGTGGAGAGACTCGGATAACTTTTCACTGCCCATCATGATTAACTCGACGCCTTTAGAG
GCTTCTGTCATGGAGGAGGTGTCCATTCGTGAGGTCAAGGACTCAGAAGAGCCTGAAGAGGGTGTGGCCGAGGTG
CAAGATGCAGGAGACAGAGTCTGA
Gene >Ophio5|5033
ATGTCCGTACCCGACGAACAAGTGCCGGTGGAGTTTTGGACAAATCTTGTTCTTGGGACAGCCTTGATCTTGGCC
AGAATCATTGTAAGATGGAGGACTCAGACGTTTCGAGGCCTGGCCGTCGATGACTTTCTCATGGCCGCCGTCATT
GTGGGTTTCCCCCAGACATAGTCTATGCAAATTTGACGCTGACACGAATATTCAGCCACTCTCCTTAGCTGGTGC
AGTGGCAGGATACATGGTCGAAGCCGACACGGACGGGCTGTCCAATGCCGGGTACGTTACGCCATATCCCGAGTT
GGCAGGCAAATCTAATCCAACATCAATCAGCATGACTCCCGACGAGCGCGCTGCTCTTGATCCCAACAGCCTCGA
ATTCCGTCTGCGAACCAAGGGCTCCAGGGCCCATATCTACGGCTGGGTACTTTATACGACACTACTCTGGACACT
CAAGCTGAGCTGGCTCTTTTACTACAAGCGACTCGGTGACCGTGTCGATAATATGACGCTCAAGGTTAATCTTGG
CTTCGCCTTCACGGCTATCTCCTATCTGGTGGTGCTTTTCGCTATCCTGCTTGGTTGCCAGCCCTTCTCCAAGTA
TTGGCAAATTAACCCTGATCCGGGAGGTGGGTTTTTTTTTTCTTTTTTCCTTTTTTTTTTTTGCCGTCTTCCAGA
CTCAATGACACGACGACTGATGAGAGACAACAGATCATTGCCATCCATCTGAGTCGGATCTTCTGGCGTGGGCTG
TGCTATGGACGGACATGACAACGGACTTGTTCATCATAGCCATCCCGCTTCCGGTAAGTTCTCACAATGTCGAAA
AAAAGAAAGCGGCTATTGGCTAACAAACGAGATAAGATGATCTGGCGCACCCGCATCTCGAGGAGGAAAAAGATT
GGCCTCATGGTCATGTTTGGTGGCGGGATCCTCACCGTCATCATGGGCGCTCTCCGCTGCGCCTTCATCTTACTA
GAAGGGGACAAACTAGGAGACGTGGCGGCGAGGTGGTCCGACCGGGAAGTCTTTGTCGCCATCATTCTCTCCACC
ATCCCCGTTCTTCTGCCCATAATTCGTCAAAGGTTCTGGCCGGAGAAGAAGAAAGCCAGCATCTCGAAAGCGATT
TATTATCCAACCACGGGGGATTCGACCACTTCCCGCACCAACGAGGACGCCACTGTCAAGCTCAGGACCGTGTCC
CGGCAGAGCACCGGTGCTTTGTCGTTGGACAGAGAATCTCTGTGGAGAGACTCGGATAACTTTTCACTGCCCATC
ATGATTAACTCGACGCCTTTAGAGGCTTCTGTCATGGAGGAGGTGTCCATTCGTGAGGTCAAGGACTCAGAAGAG
CCTGAAGAGGGTGTGGCCGAGGTGCAAGATGCAGGAGACAGAGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail