Protein ID | Ophio5|5031 |
Gene name | |
Location | scaffold_402:11494..12625 |
Strand | + |
Gene length (bp) | 1131 |
Transcript length (bp) | 1131 |
Coding sequence length (bp) | 1128 |
Protein length (aa) | 376 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF20263 | LYRM2-like | LYR motif-containing protein 2-like | 2.0E-09 | 17 | 97 |
PF05347 | Complex1_LYR | Complex 1 protein (LYR family) | 2.1E-07 | 14 | 57 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|5031 MPAPWFPVPSPLPPLCLYRHILREASYLPPAFRVKVVDTIRHRFHNNRLDTSLAKTRISRARTVLRTLRAANSGE TDAMTKLIYLGFGRAGSFRRELISEFVKPQGPSDSKALDALLDKAAEPDSKAQGADKSETQKADQGDVPEAVDKK RKPKIDFFLRWDRPKLLQLNKSQRQQQTVAKSATGWPRAALKNFNQNQFVPATNIWGKPPSESLVRTKRAKWWKI MVDKLLPPLSKGQWELLGQLSEGAQDSGNWAIPKRRPAAQAQSIAPHQWDWRAYASTTVNIIEKPKSLYNQRRSG QRDMGPYSVRQRKDKISLRWFRRQYKRTWLVTPTMSQNANTLRHSISWGQAASGVSPATRAQLEIFQGVNAHGRR S |
Coding | >Ophio5|5031 ATGCCTGCGCCGTGGTTCCCAGTGCCTTCGCCCTTGCCGCCCCTTTGCCTCTATCGTCACATACTGCGCGAGGCG TCCTACCTGCCACCGGCCTTCCGTGTCAAAGTCGTCGACACGATTCGTCACCGGTTCCATAATAACCGTTTGGAT ACCTCTCTCGCAAAGACCCGCATATCCCGCGCTCGAACCGTCCTGCGGACGCTCAGGGCCGCCAACAGCGGCGAA ACAGATGCCATGACGAAGCTCATCTACCTGGGCTTTGGCAGGGCCGGCAGCTTTAGACGAGAGCTCATATCTGAG TTCGTCAAGCCTCAAGGGCCCAGTGACTCGAAGGCCCTCGACGCACTGCTCGACAAAGCCGCCGAGCCCGACAGC AAAGCCCAAGGGGCAGACAAGAGCGAGACGCAAAAGGCAGACCAGGGTGACGTTCCAGAAGCTGTCGACAAGAAG AGGAAGCCGAAAATTGACTTCTTCCTGAGGTGGGATCGGCCCAAGCTGTTACAGCTCAACAAGTCCCAACGGCAG CAGCAAACCGTTGCCAAATCGGCGACCGGCTGGCCCAGGGCCGCTCTCAAAAACTTCAATCAGAACCAATTTGTT CCGGCCACTAACATTTGGGGCAAGCCACCGTCCGAATCCCTGGTCCGAACGAAGCGGGCCAAGTGGTGGAAAATA ATGGTCGATAAACTCTTGCCGCCCCTGAGCAAGGGTCAGTGGGAGCTGCTGGGGCAGCTGTCTGAGGGCGCCCAG GACAGCGGGAATTGGGCAATCCCCAAGAGGCGACCGGCCGCCCAGGCCCAATCGATTGCACCGCACCAGTGGGAC TGGCGGGCCTATGCCTCGACGACCGTAAACATCATCGAAAAGCCCAAGTCTTTGTACAACCAACGACGTTCTGGA CAAAGAGACATGGGGCCCTACAGTGTGCGCCAACGCAAGGACAAGATCTCGTTGAGGTGGTTCCGCAGGCAATAC AAACGCACCTGGCTGGTGACGCCCACCATGAGCCAGAACGCAAACACGCTCCGGCACTCGATCAGCTGGGGTCAG GCCGCGTCCGGGGTATCACCGGCGACGAGGGCACAGCTCGAGATTTTCCAGGGCGTGAATGCACATGGCCGACGT TCT |
Transcript | >Ophio5|5031 ATGCCTGCGCCGTGGTTCCCAGTGCCTTCGCCCTTGCCGCCCCTTTGCCTCTATCGTCACATACTGCGCGAGGCG TCCTACCTGCCACCGGCCTTCCGTGTCAAAGTCGTCGACACGATTCGTCACCGGTTCCATAATAACCGTTTGGAT ACCTCTCTCGCAAAGACCCGCATATCCCGCGCTCGAACCGTCCTGCGGACGCTCAGGGCCGCCAACAGCGGCGAA ACAGATGCCATGACGAAGCTCATCTACCTGGGCTTTGGCAGGGCCGGCAGCTTTAGACGAGAGCTCATATCTGAG TTCGTCAAGCCTCAAGGGCCCAGTGACTCGAAGGCCCTCGACGCACTGCTCGACAAAGCCGCCGAGCCCGACAGC AAAGCCCAAGGGGCAGACAAGAGCGAGACGCAAAAGGCAGACCAGGGTGACGTTCCAGAAGCTGTCGACAAGAAG AGGAAGCCGAAAATTGACTTCTTCCTGAGGTGGGATCGGCCCAAGCTGTTACAGCTCAACAAGTCCCAACGGCAG CAGCAAACCGTTGCCAAATCGGCGACCGGCTGGCCCAGGGCCGCTCTCAAAAACTTCAATCAGAACCAATTTGTT CCGGCCACTAACATTTGGGGCAAGCCACCGTCCGAATCCCTGGTCCGAACGAAGCGGGCCAAGTGGTGGAAAATA ATGGTCGATAAACTCTTGCCGCCCCTGAGCAAGGGTCAGTGGGAGCTGCTGGGGCAGCTGTCTGAGGGCGCCCAG GACAGCGGGAATTGGGCAATCCCCAAGAGGCGACCGGCCGCCCAGGCCCAATCGATTGCACCGCACCAGTGGGAC TGGCGGGCCTATGCCTCGACGACCGTAAACATCATCGAAAAGCCCAAGTCTTTGTACAACCAACGACGTTCTGGA CAAAGAGACATGGGGCCCTACAGTGTGCGCCAACGCAAGGACAAGATCTCGTTGAGGTGGTTCCGCAGGCAATAC AAACGCACCTGGCTGGTGACGCCCACCATGAGCCAGAACGCAAACACGCTCCGGCACTCGATCAGCTGGGGTCAG GCCGCGTCCGGGGTATCACCGGCGACGAGGGCACAGCTCGAGATTTTCCAGGGCGTGAATGCACATGGCCGACGT TCTTGA |
Gene | >Ophio5|5031 ATGCCTGCGCCGTGGTTCCCAGTGCCTTCGCCCTTGCCGCCCCTTTGCCTCTATCGTCACATACTGCGCGAGGCG TCCTACCTGCCACCGGCCTTCCGTGTCAAAGTCGTCGACACGATTCGTCACCGGTTCCATAATAACCGTTTGGAT ACCTCTCTCGCAAAGACCCGCATATCCCGCGCTCGAACCGTCCTGCGGACGCTCAGGGCCGCCAACAGCGGCGAA ACAGATGCCATGACGAAGCTCATCTACCTGGGCTTTGGCAGGGCCGGCAGCTTTAGACGAGAGCTCATATCTGAG TTCGTCAAGCCTCAAGGGCCCAGTGACTCGAAGGCCCTCGACGCACTGCTCGACAAAGCCGCCGAGCCCGACAGC AAAGCCCAAGGGGCAGACAAGAGCGAGACGCAAAAGGCAGACCAGGGTGACGTTCCAGAAGCTGTCGACAAGAAG AGGAAGCCGAAAATTGACTTCTTCCTGAGGTGGGATCGGCCCAAGCTGTTACAGCTCAACAAGTCCCAACGGCAG CAGCAAACCGTTGCCAAATCGGCGACCGGCTGGCCCAGGGCCGCTCTCAAAAACTTCAATCAGAACCAATTTGTT CCGGCCACTAACATTTGGGGCAAGCCACCGTCCGAATCCCTGGTCCGAACGAAGCGGGCCAAGTGGTGGAAAATA ATGGTCGATAAACTCTTGCCGCCCCTGAGCAAGGGTCAGTGGGAGCTGCTGGGGCAGCTGTCTGAGGGCGCCCAG GACAGCGGGAATTGGGCAATCCCCAAGAGGCGACCGGCCGCCCAGGCCCAATCGATTGCACCGCACCAGTGGGAC TGGCGGGCCTATGCCTCGACGACCGTAAACATCATCGAAAAGCCCAAGTCTTTGTACAACCAACGACGTTCTGGA CAAAGAGACATGGGGCCCTACAGTGTGCGCCAACGCAAGGACAAGATCTCGTTGAGGTGGTTCCGCAGGCAATAC AAACGCACCTGGCTGGTGACGCCCACCATGAGCCAGAACGCAAACACGCTCCGGCACTCGATCAGCTGGGGTCAG GCCGCGTCCGGGGTATCACCGGCGACGAGGGCACAGCTCGAGATTTTCCAGGGCGTGAATGCACATGGCCGACGT TCTTGA |