Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|5008
Gene name
Locationscaffold_40:53984..54920
Strand-
Gene length (bp)936
Transcript length (bp)747
Coding sequence length (bp)744
Protein length (aa) 248

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01636 APH Phosphotransferase enzyme family 1.5E-11 59 229
PF01633 Choline_kinase Choline/ethanolamine kinase 3.6E-06 192 223

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|5008
MSSAEHDTASSLWQRLIRWLQDCTLSLRLRLGSKIMYDDVRKIVRVSPSQVIKGPCSKQEVEAMEYVQSHTSVCL
PRIHRTYHRAEGVFIAMDYVDGARLDHLWPRLEDGERRRVVEQVWNSVRQLHACRPPAALKGVTAASVSGGPIRD
GILGVDDVGAVSAGPFASREDFDDFVRGNEDVEAFPTKPGRIGLVHADLTPRNIILRKGDGKVCFIDWEFAGWWP
LYWERVKWHFADFPPTPDWAVAY
Coding >Ophio5|5008
ATGTCTTCAGCAGAGCATGATACGGCATCTTCCCTCTGGCAGCGCCTCATCCGCTGGCTACAGGACTGCACCCTC
TCCCTCCGCCTGCGTCTCGGCTCCAAAATCATGTACGACGACGTCCGCAAGATCGTCCGTGTCTCGCCCTCCCAG
GTCATCAAAGGCCCCTGCTCCAAGCAAGAGGTCGAGGCTATGGAGTACGTGCAGAGTCACACGTCGGTGTGTCTG
CCGCGCATCCACCGGACGTATCACCGCGCAGAGGGCGTCTTTATCGCCATGGATTACGTCGACGGCGCTCGCCTT
GATCATCTCTGGCCGCGGCTTGAGGATGGAGAGAGGCGGAGGGTTGTCGAGCAGGTGTGGAATTCTGTCAGGCAG
CTTCATGCGTGTCGTCCGCCGGCCGCGCTGAAGGGGGTTACTGCGGCATCTGTATCGGGGGGGCCTATTCGTGAT
GGCATCTTGGGGGTCGATGACGTTGGGGCCGTCAGCGCGGGGCCCTTTGCAAGTCGAGAGGATTTCGACGACTTT
GTCAGGGGGAACGAGGACGTTGAGGCCTTTCCGACGAAGCCGGGGCGCATTGGCCTCGTTCATGCGGATCTGACG
CCGAGAAACATCATTTTGAGAAAGGGGGATGGCAAGGTTTGTTTCATTGATTGGGAGTTTGCCGGTTGGTGGCCG
CTTTACTGGGAGCGTGTCAAATGGCACTTTGCTGACTTTCCTCCTACGCCGGACTGGGCTGTTGCGTAT
Transcript >Ophio5|5008
ATGTCTTCAGCAGAGCATGATACGGCATCTTCCCTCTGGCAGCGCCTCATCCGCTGGCTACAGGACTGCACCCTC
TCCCTCCGCCTGCGTCTCGGCTCCAAAATCATGTACGACGACGTCCGCAAGATCGTCCGTGTCTCGCCCTCCCAG
GTCATCAAAGGCCCCTGCTCCAAGCAAGAGGTCGAGGCTATGGAGTACGTGCAGAGTCACACGTCGGTGTGTCTG
CCGCGCATCCACCGGACGTATCACCGCGCAGAGGGCGTCTTTATCGCCATGGATTACGTCGACGGCGCTCGCCTT
GATCATCTCTGGCCGCGGCTTGAGGATGGAGAGAGGCGGAGGGTTGTCGAGCAGGTGTGGAATTCTGTCAGGCAG
CTTCATGCGTGTCGTCCGCCGGCCGCGCTGAAGGGGGTTACTGCGGCATCTGTATCGGGGGGGCCTATTCGTGAT
GGCATCTTGGGGGTCGATGACGTTGGGGCCGTCAGCGCGGGGCCCTTTGCAAGTCGAGAGGATTTCGACGACTTT
GTCAGGGGGAACGAGGACGTTGAGGCCTTTCCGACGAAGCCGGGGCGCATTGGCCTCGTTCATGCGGATCTGACG
CCGAGAAACATCATTTTGAGAAAGGGGGATGGCAAGGTTTGTTTCATTGATTGGGAGTTTGCCGGTTGGTGGCCG
CTTTACTGGGAGCGTGTCAAATGGCACTTTGCTGACTTTCCTCCTACGCCGGACTGGGCTGTTGCGTATTGA
Gene >Ophio5|5008
ATGTCTTCAGCAGAGCATGATACGGCATCTTCCCTCTGGCAGCGCCTCATCCGCTGGCTACAGGACTGCACCCTC
TCCCTCCGCCTGCGTCTCGGCTCCAAAATCATGTACGACGACGTCCGCAAGATCGTCCGTGTCTCGCCCTCCCAG
GTCATCAAAGGCCCCTGCTCCAAGCAAGAGGTCGAGGCTATGGAGTACGTGCAGAGTCACACGTCGGTGTGTCTG
CCGCGCATCCACCGGACGTATCACCGCGCAGAGGGCGTCTTTATCGCCATGGATTACGTCGACGGCGCTCGCCTT
GATCATCTCTGGCCGCGGCTTGAGGATGGAGAGAGGCGGAGGGTTGTCGAGCAGGTGTGGAATTCTGTCAGGCAG
CTTCATGCGTGTCGTCCGCCGGCCGCGCTGAAGGGGGTTACTGCGGCATCTGTATCGGGGGGGCCTATTCGTGAT
GGCATCTTGGGGGTCGATGACGTTGGGGCCGTCAGCGCGGGGCCCTTTGCAAGTCGAGAGGATTTCGACGACTTT
GTCAGGGGGAACGAGGACGTTGAGGCCTTTCCGACGAAGCCGGGGCGCATTGGCCTCGTTCATGCGGATCTGACG
CCGAGAAACATCATTTTGAGAAAGGGGGATGGCAAGGTTTGTTTCATTGATTGGGAGTTTGCCGGTTGGTGGCCG
CTTTGTGAGTTTTCACCTGCCACTCGTCACTTAGACTCGTTCACTTATTTGATTGTCTTCTAGACTGGGAGCGTG
TCAAATGGCACTTTGCTGACTTTCCTCCTACGCCGGACTGGGTGAGGCTGATGGACGACCTTTCTGGCTGGGCTG
CTGGCTTGGAGGAGGATGGGGGTGAAGGAGGGGAGAATTAGGCTGTTGCGGTTGGTCTCTGCGCATGACCTGACG
ACGACGTACAGAGCCTAACGCTAGGTGCAGTATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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