Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4987
Gene name
Locationscaffold_4:111562..113670
Strand+
Gene length (bp)2108
Transcript length (bp)1812
Coding sequence length (bp)1809
Protein length (aa) 603

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04114 Gaa1 Gaa1-like, GPI transamidase component 2.1E-165 121 593

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P39012|GAA1_YEAST GPI transamidase component GAA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAA1 PE=1 SV=1 1 525 1.0E-83
sp|Q9US48|GAA1_SCHPO GPI transamidase component gaa1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gaa1 PE=3 SV=1 5 524 3.0E-79
sp|Q9WTK3|GPAA1_MOUSE Glycosylphosphatidylinositol anchor attachment 1 protein OS=Mus musculus GN=Gpaa1 PE=1 SV=3 4 574 3.0E-53
sp|O43292|GPAA1_HUMAN Glycosylphosphatidylinositol anchor attachment 1 protein OS=Homo sapiens GN=GPAA1 PE=1 SV=3 4 574 5.0E-51

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0042765 GPI-anchor transamidase complex Yes
GO:1905369 endopeptidase complex No
GO:0098796 membrane protein complex No
GO:0110165 cellular anatomical entity No
GO:0140534 endoplasmic reticulum protein-containing complex No
GO:0031224 intrinsic component of membrane No
GO:0005575 cellular_component No
GO:0032991 protein-containing complex No
GO:0008303 caspase complex No
GO:1905368 peptidase complex No
GO:1902494 catalytic complex No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 20 39 19
2 361 383 22
3 423 445 22
4 452 474 22
5 494 516 22
6 536 558 22
7 573 595 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4987
MSRLLSSVLSLRRDPRILKLPPYLSLLCIVIGVIWLLLLPLENYSRRTYISENALLPGQVHTYFGGSEHDIFLAY
RHELDRLTDADNHRINDEVESILKGVGIKVGRQNYTYQSAGAKFVGENVYGILQAPRGDATEAIVLVAAWKSIEG
KLNRNGVALALTLARYFKRWSLWSKDIIFLLPPDSRTGTQAWVDAYHDAHDPATVASLPLKSGALQGAIAVDYPT
EQLFDGIHVIYDGTNGQLPNLDLTNSIVNIAGGQMGIQTAIQDMKHHTGRYPDRLKTMLRGMLKQGLGNAAGPHS
SFIPYHVDSVTLQPYGQGWHDEMAMGRVLEGTFRSLNNLLEHLHQSFFFYLLMQRDRFVSIGTYLPSAMLVSANF
TIMAIFLWVKSGQPTGHQSTGSGSRAVSVKSSARGGNPVPSSLVERDLFLPLVIVAGCHAASVVPLFVFNNLPAN
TFSIAFPLFSLVSAVLPFIVSHLLGTFFTPTMQHFQLTKSLSLLILGMALATLATLNFSLAFLVGLLATPLTFVQ
PTGSIFTRYSLAGLLNAVAPPLVMLTAAQLWDVPVAEVLREASFGWNVWGMHTAVVVWCLWWPAWLVGAINLFGD
VLG
Coding >Ophio5|4987
ATGTCACGACTGCTCTCCTCGGTCCTGTCCTTGCGGCGAGACCCTCGAATCCTGAAGCTCCCGCCTTACTTGTCT
CTCTTGTGCATCGTCATTGGCGTCATCTGGCTTCTGCTATTGCCTCTGGAAAACTACTCGAGGCGCACCTATATT
TCGGAAAATGCCCTCCTACCTGGTCAGGTACACACGTACTTCGGAGGAAGCGAGCATGACATCTTTTTGGCTTAT
CGCCATGAGCTGGATCGCTTGACAGATGCGGACAACCACAGGATCAACGACGAAGTTGAGTCTATTCTGAAGGGT
GTCGGGATCAAGGTTGGTCGACAAAATTACACCTATCAATCAGCGGGAGCAAAGTTCGTGGGCGAGAATGTGTAT
GGCATACTGCAAGCCCCACGCGGGGACGCCACAGAAGCCATCGTCCTTGTTGCGGCGTGGAAGAGCATTGAGGGG
AAGCTGAACCGCAACGGGGTGGCCTTGGCTTTGACACTAGCTCGTTACTTCAAACGCTGGTCTCTTTGGTCCAAG
GACATTATTTTCCTCCTCCCCCCCGACAGCCGTACGGGAACACAGGCTTGGGTGGATGCGTATCATGATGCTCAC
GACCCAGCCACAGTTGCATCGCTTCCGCTAAAGTCCGGCGCATTGCAAGGCGCCATTGCCGTGGACTATCCGACG
GAACAGCTTTTCGACGGCATCCACGTCATATACGATGGTACCAATGGGCAGCTTCCCAACCTTGACCTCACCAAC
TCGATTGTCAATATCGCCGGTGGCCAGATGGGTATCCAGACCGCCATCCAAGACATGAAACATCATACAGGCCGT
TATCCTGATCGGCTCAAGACGATGCTTCGAGGCATGCTGAAACAGGGACTCGGAAACGCAGCTGGGCCGCATAGC
AGTTTTATTCCCTACCATGTTGACTCAGTGACGTTACAGCCGTACGGCCAAGGTTGGCACGACGAGATGGCCATG
GGACGGGTGCTCGAAGGCACCTTTAGGAGCTTGAACAATCTTCTGGAGCATCTGCATCAGAGCTTTTTCTTCTAC
CTGCTAATGCAAAGAGATCGGTTCGTCAGCATCGGCACTTACCTGCCCAGTGCCATGCTCGTCTCAGCCAACTTC
ACCATCATGGCCATCTTTCTGTGGGTGAAGAGTGGCCAGCCAACGGGCCATCAATCAACGGGGAGCGGAAGCCGA
GCAGTTTCGGTCAAGTCTAGTGCACGAGGAGGCAATCCTGTCCCGTCATCTCTCGTTGAGCGTGACTTATTCCTC
CCCCTGGTTATAGTGGCTGGATGCCACGCAGCATCAGTCGTGCCGCTTTTCGTCTTTAACAACTTGCCTGCCAAT
ACATTCTCAATCGCCTTCCCCCTATTCTCACTTGTTTCGGCCGTTCTGCCTTTCATCGTCTCGCACCTGCTTGGC
ACCTTTTTCACACCAACGATGCAGCACTTTCAGCTCACCAAGTCTCTCTCCTTGCTCATCCTTGGTATGGCTTTG
GCTACACTGGCTACACTCAACTTTTCACTGGCGTTTTTGGTGGGCTTGCTGGCCACCCCCTTGACCTTTGTCCAG
CCCACAGGCAGCATATTTACCAGGTACTCTCTAGCTGGGCTGTTGAATGCTGTGGCACCACCTCTTGTCATGTTG
ACCGCAGCGCAGCTGTGGGATGTACCAGTGGCGGAAGTGCTGCGGGAAGCCAGTTTTGGGTGGAATGTCTGGGGG
ATGCACACAGCTGTGGTCGTCTGGTGTTTATGGTGGCCGGCTTGGCTCGTGGGTGCTATCAACCTTTTTGGGGAC
GTCCTTGGG
Transcript >Ophio5|4987
ATGTCACGACTGCTCTCCTCGGTCCTGTCCTTGCGGCGAGACCCTCGAATCCTGAAGCTCCCGCCTTACTTGTCT
CTCTTGTGCATCGTCATTGGCGTCATCTGGCTTCTGCTATTGCCTCTGGAAAACTACTCGAGGCGCACCTATATT
TCGGAAAATGCCCTCCTACCTGGTCAGGTACACACGTACTTCGGAGGAAGCGAGCATGACATCTTTTTGGCTTAT
CGCCATGAGCTGGATCGCTTGACAGATGCGGACAACCACAGGATCAACGACGAAGTTGAGTCTATTCTGAAGGGT
GTCGGGATCAAGGTTGGTCGACAAAATTACACCTATCAATCAGCGGGAGCAAAGTTCGTGGGCGAGAATGTGTAT
GGCATACTGCAAGCCCCACGCGGGGACGCCACAGAAGCCATCGTCCTTGTTGCGGCGTGGAAGAGCATTGAGGGG
AAGCTGAACCGCAACGGGGTGGCCTTGGCTTTGACACTAGCTCGTTACTTCAAACGCTGGTCTCTTTGGTCCAAG
GACATTATTTTCCTCCTCCCCCCCGACAGCCGTACGGGAACACAGGCTTGGGTGGATGCGTATCATGATGCTCAC
GACCCAGCCACAGTTGCATCGCTTCCGCTAAAGTCCGGCGCATTGCAAGGCGCCATTGCCGTGGACTATCCGACG
GAACAGCTTTTCGACGGCATCCACGTCATATACGATGGTACCAATGGGCAGCTTCCCAACCTTGACCTCACCAAC
TCGATTGTCAATATCGCCGGTGGCCAGATGGGTATCCAGACCGCCATCCAAGACATGAAACATCATACAGGCCGT
TATCCTGATCGGCTCAAGACGATGCTTCGAGGCATGCTGAAACAGGGACTCGGAAACGCAGCTGGGCCGCATAGC
AGTTTTATTCCCTACCATGTTGACTCAGTGACGTTACAGCCGTACGGCCAAGGTTGGCACGACGAGATGGCCATG
GGACGGGTGCTCGAAGGCACCTTTAGGAGCTTGAACAATCTTCTGGAGCATCTGCATCAGAGCTTTTTCTTCTAC
CTGCTAATGCAAAGAGATCGGTTCGTCAGCATCGGCACTTACCTGCCCAGTGCCATGCTCGTCTCAGCCAACTTC
ACCATCATGGCCATCTTTCTGTGGGTGAAGAGTGGCCAGCCAACGGGCCATCAATCAACGGGGAGCGGAAGCCGA
GCAGTTTCGGTCAAGTCTAGTGCACGAGGAGGCAATCCTGTCCCGTCATCTCTCGTTGAGCGTGACTTATTCCTC
CCCCTGGTTATAGTGGCTGGATGCCACGCAGCATCAGTCGTGCCGCTTTTCGTCTTTAACAACTTGCCTGCCAAT
ACATTCTCAATCGCCTTCCCCCTATTCTCACTTGTTTCGGCCGTTCTGCCTTTCATCGTCTCGCACCTGCTTGGC
ACCTTTTTCACACCAACGATGCAGCACTTTCAGCTCACCAAGTCTCTCTCCTTGCTCATCCTTGGTATGGCTTTG
GCTACACTGGCTACACTCAACTTTTCACTGGCGTTTTTGGTGGGCTTGCTGGCCACCCCCTTGACCTTTGTCCAG
CCCACAGGCAGCATATTTACCAGGTACTCTCTAGCTGGGCTGTTGAATGCTGTGGCACCACCTCTTGTCATGTTG
ACCGCAGCGCAGCTGTGGGATGTACCAGTGGCGGAAGTGCTGCGGGAAGCCAGTTTTGGGTGGAATGTCTGGGGG
ATGCACACAGCTGTGGTCGTCTGGTGTTTATGGTGGCCGGCTTGGCTCGTGGGTGCTATCAACCTTTTTGGGGAC
GTCCTTGGGTGA
Gene >Ophio5|4987
ATGTCACGACTGCTCTGTGAGTAACCCATTCCATGACCAACGCAGCGCACTGACAGATAGTCCGTCATTCGAATG
CTCGTTGCCTCCAGCCTCGGTCCTGTCCTTGCGGCGAGACCCTCGAATCCTGAAGCTCCCGCCTTACTTGTCTCT
CTTGTGCATCGTCATTGGCGTCATCTGGCTTCTGCTATTGCCTCTGGAAAACTACTCGAGGCGCACCTATATTTC
GGAAAATGCCCTCCTACCTGGTCAGGTACACACGTACTTCGGAGGAAGCGAGCATGACATCTTTTTGGCTTATCG
CCATGAGCTGGATCGCTTGACAGATGCGGACAACCACAGGTAAGGGAAATTTTTTTTGGGGGAGGCGGGAGGGGG
CGGGGAAAGACGAGCACAAACTTCGTGGCCTTGCCTAAGGATACTGATTGCAGTTCCAAGGATCAACGACGAAGT
TGAGTCTATTCTGAAGGGTGTCGGGATCAAGGTTGGTCGACAAAATTACACCTATCAATCAGCGGGAGCAAAGTT
CGTGGGCGAGAATGTGTATGGCATACTGCAAGCCCCACGCGGGGACGCCACAGAAGCCATCGTCCTTGTTGCGGC
GTGGAAGAGCATTGAGGGGAAGCTGAACCGCAACGGGGTGGCCTTGGCTTTGACACTAGCTCGTTACTTCAAACG
TGAGCGCAGCCTCTATACATGCCTTGTGTAGGCTGACAAGTCGATAGGCTGGTCTCTTTGGTCCAAGGACATTAT
TTTCCTCCTCCCCCCCGACAGCCGTACGGGAACACAGGCTTGGGTGGATGCGTATCATGATGCTCACGACCCAGC
CACAGTTGCATCGCTTCCGCTAAAGTCCGGCGCATTGCAAGGCGCCATTGCCGTGGACTATCCGACGGAACAGCT
TTTCGACGGCATCCACGTCATATACGATGGTACCAATGGGCAGCTTCCCAACCTTGACCTCACCAACTCGATTGT
CAATATCGCCGGTGGCCAGATGGGTATCCAGACCGCCATCCAAGACATGAAACATCATACAGGCCGTTATCCTGA
TCGGCTCAAGACGATGCTTCGAGGCATGCTGAAACAGGGACTCGGAAACGCAGCTGGGCCGCATAGCAGTTTTAT
TCCCTACCATGTTGACTCAGTGACGTTACAGCCGTACGGCCAAGGTTGGCACGACGAGATGGCCATGGGACGGGT
GCTCGAAGGCACCTTTAGGAGCTTGAACAATCTTCTGGAGCATCTGCATCAGAGCTTTTTCTTCTACCTGCTAAT
GCAAAGAGATCGGTTCGTCAGCATCGGCACTTACCTGCCCAGTGCCATGCTCGTCTCAGCCAACTTCACCATCAT
GGCCATCTTTCTGTGGGTGAAGAGTGGCCAGCCAACGGGCCATCAATCAACGGGGAGCGGAAGCCGAGCAGTTTC
GGTCAAGTCTAGTGCACGAGGAGGCAATCCTGTCCCGTCATCTCTCGTTGAGCGTGACTTATTCCTCCCCCTGGT
TATAGTGGCTGGATGCCACGCAGCATCAGTCGTGCCGCTTTTCGTCTTTAACAACTTGCCTGCCAATGTGAGCTT
CTAAAATTCTCCTAGAGGACACCTCCGCGGCAGCGCCGAGATTTTACTCGCTAATGTCATTCCCCTTGTAGACAT
TCTCAATCGCCTTCCCCCTATTCTCACTTGTTTCGGCCGTTCTGCCTTTCATCGTCTCGCACCTGCTTGGCACCT
TTTTCACACCAACGATGCAGCACTTTCAGCTCACCAAGTCTCTCTCCTTGCTCATCCTTGGTATGGCTTTGGCTA
CACTGGCTACACTCAACTTTTCACTGGCGTTTTTGGTGGGCTTGCTGGCCACCCCCTTGACCTTTGTCCAGCCCA
CAGGCAGCATATTTACCAGGTACTCTCTAGCTGGGCTGTTGAATGCTGTGGCACCACCTCTTGTCATGTTGACCG
CAGCGCAGCTGTGGGATGTACCAGTGGCGGAAGTGCTGCGGGAAGCCAGTTTTGGGTGGAATGTCTGGGGGATGC
ACACAGCTGTGGTCGTCTGGTGTTTATGGTGGCCGGCTTGGCTCGTGGGTGCTATCAACCTTTTTGGGGACGTCC
TTGGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail