Protein ID | Ophio5|4947 |
Gene name | |
Location | scaffold_4:9270..11316 |
Strand | + |
Gene length (bp) | 2046 |
Transcript length (bp) | 1881 |
Coding sequence length (bp) | 1878 |
Protein length (aa) | 626 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 22 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 296 | 315 | 19 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 43.95 | 24.17 | 63.73 |
CcL | In ants, during behavior modification | 43.46 | 22.71 | 64.22 |
CcD | In ants, recently dead | 40.73 | 21.41 | 60.05 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.969653 | no |
SC16a | CcD | 0.784992 | no |
CcL | CcD | 0.823619 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4947 MNTATSFFMVPAGMLGAPTQSQPVPSGPVVFPPWTRDDEDEDKIRHVELKRHWNTKRDSSPAARGSDSKSRPSVK TGDSENHGYGLSTTADDSDDSDDSDDDQQEHSAGSSPDSKQAPDPLGLPSPKSRPTPLPMPKNKLDTTPTRTIDP TLGPLTTLGKGLLPGAVNKADDDDSDNRDEHNEQDNFDKIDEHDEHDEPFFFTNNPNSPPQSPRFPDIGASYPIV TMPAALDPSHDGFSFPESTAERKGLQPVVTVTESASSSRTPAAADSMQTPDHEVVQAPAHHHGLDADAEKALVAV GAVGATIIVFFVAWFGWKCYKMHRRSGQSKDWQHHHTPSMSLDNIGQPGGTSRRSGFLGLERPKQFMMNLASRVP ILKERVAMRSWSNLDKQHDDAVWAEKRLPVFSQDSHRRNSNGITVHTAIMTKSERGNESTTWSLPHQAPSQQFRP TPRSNNTLSGISDASSLSSGFGDGDIIMPPAVTGMATTTTVTAVAVPAPVARRSSLSTASRNYRDTVYTEATEAT EASEDTVPRFRTINSWVRQQSGRIKRARQRDSDAPPLPNPPPEQDFRMMMPDNEEPRRVVESGYGVAESDIIAGY GATEAASQSGYGVVETDRPRGYGIAG |
Coding | >Ophio5|4947 ATGAACACTGCTACTTCTTTTTTTATGGTTCCAGCCGGGATGCTCGGGGCTCCTACCCAGAGCCAGCCTGTACCA TCCGGGCCCGTGGTCTTTCCGCCCTGGACGAGAGACGACGAAGACGAGGATAAGATCCGCCATGTCGAATTAAAG CGACATTGGAATACCAAACGCGACTCGAGCCCGGCCGCCCGAGGAAGCGACTCTAAGTCTCGGCCATCCGTAAAG ACGGGAGATTCAGAGAACCATGGTTATGGCTTGTCCACCACCGCCGACGACAGCGACGACAGCGACGACAGCGAC GACGATCAGCAGGAGCATTCAGCTGGCAGTTCCCCTGATTCGAAGCAGGCTCCCGATCCTCTGGGCCTCCCCTCA CCGAAGTCACGACCGACGCCACTACCAATGCCCAAGAACAAGCTGGACACTACGCCTACAAGAACCATTGACCCG ACTCTGGGTCCCCTCACTACGCTCGGCAAGGGTTTGTTGCCTGGTGCCGTCAATAAAGCAGATGATGACGATTCC GACAATCGTGACGAGCACAACGAGCAAGACAATTTTGATAAAATTGACGAGCACGATGAGCACGACGAACCCTTC TTCTTTACAAATAACCCGAATAGTCCTCCACAAAGCCCGCGCTTCCCGGATATCGGGGCATCATATCCCATTGTG ACTATGCCCGCGGCCCTGGATCCATCCCATGACGGCTTTTCATTCCCAGAGTCGACGGCGGAAAGGAAAGGTTTA CAGCCTGTTGTCACCGTCACAGAGTCGGCATCGTCGAGTCGCACACCGGCTGCGGCCGACTCGATGCAAACCCCT GATCACGAGGTAGTGCAGGCACCAGCTCACCATCATGGCCTTGACGCGGACGCAGAGAAGGCTCTTGTTGCCGTC GGCGCAGTTGGTGCTACCATCATCGTGTTCTTCGTCGCCTGGTTTGGCTGGAAATGCTACAAAATGCACAGAAGA TCAGGTCAGTCGAAGGACTGGCAGCATCATCATACGCCGTCCATGTCGCTGGACAACATCGGGCAGCCTGGCGGG ACCAGCCGGAGAAGCGGCTTCCTAGGTCTGGAGCGGCCCAAGCAGTTCATGATGAACTTAGCCTCGCGCGTGCCC ATCCTTAAGGAGCGAGTCGCCATGCGGAGCTGGTCCAACCTCGACAAGCAGCACGACGACGCCGTCTGGGCAGAG AAGCGGCTCCCCGTTTTTAGCCAGGACAGCCACCGGCGCAACTCGAACGGCATCACCGTCCACACGGCCATCATG ACCAAGAGCGAGCGCGGCAACGAGAGCACCACCTGGAGTCTGCCTCACCAGGCGCCCAGCCAGCAGTTCCGGCCG ACGCCGCGGTCCAATAACACGCTTTCCGGCATCAGCGACGCGTCGTCGTTGTCTTCCGGTTTCGGCGACGGCGAT ATCATCATGCCGCCGGCGGTGACGGGCATGGCCACTACCACGACCGTCACCGCTGTGGCGGTCCCGGCGCCCGTC GCCCGCCGATCGAGCCTCAGCACCGCGTCTCGCAATTACCGTGACACCGTTTATACCGAGGCCACCGAGGCCACC GAGGCGTCAGAGGACACGGTACCGCGCTTCCGCACCATCAACTCGTGGGTCCGCCAGCAGTCGGGCCGCATCAAG CGAGCCAGGCAGCGCGACAGCGACGCGCCCCCCCTGCCCAACCCGCCGCCGGAGCAGGACTTTCGCATGATGATG CCGGACAATGAAGAGCCGCGGCGGGTCGTTGAGTCGGGGTACGGCGTCGCCGAGTCGGACATTATAGCGGGCTAC GGTGCCACCGAGGCGGCTAGTCAGTCGGGATACGGCGTGGTAGAGACGGACCGTCCTAGGGGGTATGGTATAGCA GGA |
Transcript | >Ophio5|4947 ATGAACACTGCTACTTCTTTTTTTATGGTTCCAGCCGGGATGCTCGGGGCTCCTACCCAGAGCCAGCCTGTACCA TCCGGGCCCGTGGTCTTTCCGCCCTGGACGAGAGACGACGAAGACGAGGATAAGATCCGCCATGTCGAATTAAAG CGACATTGGAATACCAAACGCGACTCGAGCCCGGCCGCCCGAGGAAGCGACTCTAAGTCTCGGCCATCCGTAAAG ACGGGAGATTCAGAGAACCATGGTTATGGCTTGTCCACCACCGCCGACGACAGCGACGACAGCGACGACAGCGAC GACGATCAGCAGGAGCATTCAGCTGGCAGTTCCCCTGATTCGAAGCAGGCTCCCGATCCTCTGGGCCTCCCCTCA CCGAAGTCACGACCGACGCCACTACCAATGCCCAAGAACAAGCTGGACACTACGCCTACAAGAACCATTGACCCG ACTCTGGGTCCCCTCACTACGCTCGGCAAGGGTTTGTTGCCTGGTGCCGTCAATAAAGCAGATGATGACGATTCC GACAATCGTGACGAGCACAACGAGCAAGACAATTTTGATAAAATTGACGAGCACGATGAGCACGACGAACCCTTC TTCTTTACAAATAACCCGAATAGTCCTCCACAAAGCCCGCGCTTCCCGGATATCGGGGCATCATATCCCATTGTG ACTATGCCCGCGGCCCTGGATCCATCCCATGACGGCTTTTCATTCCCAGAGTCGACGGCGGAAAGGAAAGGTTTA CAGCCTGTTGTCACCGTCACAGAGTCGGCATCGTCGAGTCGCACACCGGCTGCGGCCGACTCGATGCAAACCCCT GATCACGAGGTAGTGCAGGCACCAGCTCACCATCATGGCCTTGACGCGGACGCAGAGAAGGCTCTTGTTGCCGTC GGCGCAGTTGGTGCTACCATCATCGTGTTCTTCGTCGCCTGGTTTGGCTGGAAATGCTACAAAATGCACAGAAGA TCAGGTCAGTCGAAGGACTGGCAGCATCATCATACGCCGTCCATGTCGCTGGACAACATCGGGCAGCCTGGCGGG ACCAGCCGGAGAAGCGGCTTCCTAGGTCTGGAGCGGCCCAAGCAGTTCATGATGAACTTAGCCTCGCGCGTGCCC ATCCTTAAGGAGCGAGTCGCCATGCGGAGCTGGTCCAACCTCGACAAGCAGCACGACGACGCCGTCTGGGCAGAG AAGCGGCTCCCCGTTTTTAGCCAGGACAGCCACCGGCGCAACTCGAACGGCATCACCGTCCACACGGCCATCATG ACCAAGAGCGAGCGCGGCAACGAGAGCACCACCTGGAGTCTGCCTCACCAGGCGCCCAGCCAGCAGTTCCGGCCG ACGCCGCGGTCCAATAACACGCTTTCCGGCATCAGCGACGCGTCGTCGTTGTCTTCCGGTTTCGGCGACGGCGAT ATCATCATGCCGCCGGCGGTGACGGGCATGGCCACTACCACGACCGTCACCGCTGTGGCGGTCCCGGCGCCCGTC GCCCGCCGATCGAGCCTCAGCACCGCGTCTCGCAATTACCGTGACACCGTTTATACCGAGGCCACCGAGGCCACC GAGGCGTCAGAGGACACGGTACCGCGCTTCCGCACCATCAACTCGTGGGTCCGCCAGCAGTCGGGCCGCATCAAG CGAGCCAGGCAGCGCGACAGCGACGCGCCCCCCCTGCCCAACCCGCCGCCGGAGCAGGACTTTCGCATGATGATG CCGGACAATGAAGAGCCGCGGCGGGTCGTTGAGTCGGGGTACGGCGTCGCCGAGTCGGACATTATAGCGGGCTAC GGTGCCACCGAGGCGGCTAGTCAGTCGGGATACGGCGTGGTAGAGACGGACCGTCCTAGGGGGTATGGTATAGCA GGATGA |
Gene | >Ophio5|4947 ATGAACACTGCTACTTCTTTTTGTGCGCCACCACACTCCCACCAGGCGTTTCCCAACGCTCACTGGCGGTGCTAT CAGTTATGGTTCCAGCCGGGATGCTCGGGGCTCCTACCCAGAGCCAGCCTGTACCATCCGGGCCCGTGGTCTTTC CGCCCTGGACGAGAGACGACGAAGACGAGGATAAGATCCGCCATGTCGAATTAAAGCGACATTGGAATACCAAAC GCGACTCGAGCCCGGCCGCCCGAGGAAGCGACTCTAAGTCTCGGCCATCCGTAAAGACGGGAGATTCAGAGAACC ATGGTTATGGCTTGTCCACCACCGCCGACGACAGCGACGACAGCGACGACAGCGACGACGATCAGCAGGAGCATT CAGCTGGCAGTTCCCCTGATTCGAAGCAGGCTCCCGATCCTCTGGGCCTCCCCTCACCGAAGTCACGACCGACGC CACTACCAATGCCCAAGAACAAGCTGGACACTACGCCTACAAGAACCATTGACCCGACTCTGGGTCCCCTCACTA CGCTCGGCAAGGGTTTGTTGGTAAGTAGGCCGCGAAAATGGTTTTAAATTTGACTCTAACCAGACGCAGCCTGGT GCCGTCAATAAAGCAGATGATGACGATTCCGACAATCGTGACGAGCACAACGAGCAAGACAATTTTGATAAAATT GACGAGCACGATGAGCACGACGAACCCTTCTTCTTTACAAATAACCCGAATAGTCCTCCACAAAGCCCGCGCTTC CCGGATATCGGGGCATCATATCCCATTGTGACTATGCCCGCGGCCCTGGATCCATCCCATGACGGCTTTTCATTC CCAGAGTCGACGGCGGAAAGGAAAGGTTTACAGCCTGTTGTCACCGTCACAGAGTCGGCATCGTCGAGTCGCACA CCGGCTGCGGCCGACTCGATGCAAACCCCTGATCACGAGGTAGTGCAGGCACCAGCTCACCATCATGGCCTTGAC GCGGACGCAGAGAAGGCTCTTGTTGCCGTCGGCGCAGTTGGTATGTGATGTGGCTCCTGATGGAAAGTCGCGTGT GCTGCCTGCTGACGATAGCAATTAGGTGCTACCATCATCGTGTTCTTCGTCGCCTGGTTTGGCTGGAAATGCTAC AAAATGCACAGAAGATCAGGTCAGTCGAAGGACTGGCAGCATCATCATACGCCGTCCATGTCGCTGGACAACATC GGGCAGCCTGGCGGGACCAGCCGGAGAAGCGGCTTCCTAGGTCTGGAGCGGCCCAAGCAGTTCATGATGAACTTA GCCTCGCGCGTGCCCATCCTTAAGGAGCGAGTCGCCATGCGGAGCTGGTCCAACCTCGACAAGCAGCACGACGAC GCCGTCTGGGCAGAGAAGCGGCTCCCCGTTTTTAGCCAGGACAGCCACCGGCGCAACTCGAACGGCATCACCGTC CACACGGCCATCATGACCAAGAGCGAGCGCGGCAACGAGAGCACCACCTGGAGTCTGCCTCACCAGGCGCCCAGC CAGCAGTTCCGGCCGACGCCGCGGTCCAATAACACGCTTTCCGGCATCAGCGACGCGTCGTCGTTGTCTTCCGGT TTCGGCGACGGCGATATCATCATGCCGCCGGCGGTGACGGGCATGGCCACTACCACGACCGTCACCGCTGTGGCG GTCCCGGCGCCCGTCGCCCGCCGATCGAGCCTCAGCACCGCGTCTCGCAATTACCGTGACACCGTTTATACCGAG GCCACCGAGGCCACCGAGGCGTCAGAGGACACGGTACCGCGCTTCCGCACCATCAACTCGTGGGTCCGCCAGCAG TCGGGCCGCATCAAGCGAGCCAGGCAGCGCGACAGCGACGCGCCCCCCCTGCCCAACCCGCCGCCGGAGCAGGAC TTTCGCATGATGATGCCGGACAATGAAGAGCCGCGGCGGGTCGTTGAGTCGGGGTACGGCGTCGCCGAGTCGGAC ATTATAGCGGGCTACGGTGCCACCGAGGCGGCTAGTCAGTCGGGATACGGCGTGGTAGAGACGGACCGTCCTAGG GGGTATGGTATAGCAGGATGA |