Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4913
Gene name
Locationscaffold_396:6274..7322
Strand-
Gene length (bp)1048
Transcript length (bp)954
Coding sequence length (bp)951
Protein length (aa) 317

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01778 Ribosomal_L28e Ribosomal L28e protein family 8.2E-40 6 120
PF04874 Mak16 Mak16 protein C-terminal region 7.6E-28 144 246

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9UTE6|MAK16_SCHPO Protein mak16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mak16 PE=3 SV=1 1 201 2.0E-87
sp|P10962|MAK16_YEAST Protein MAK16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAK16 PE=1 SV=2 3 253 4.0E-87
sp|Q7ZYG5|MK16B_XENLA Protein MAK16 homolog B OS=Xenopus laevis GN=mak16-b PE=2 SV=1 1 254 5.0E-65
sp|Q66L33|MK16A_XENLA Protein MAK16 homolog A OS=Xenopus laevis GN=mak16-a PE=2 SV=1 1 183 2.0E-64
sp|Q6P7N1|MAK16_XENTR Protein MAK16 homolog OS=Xenopus tropicalis GN=mak16 PE=2 SV=1 1 183 3.0E-64
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9UTE6|MAK16_SCHPO Protein mak16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mak16 PE=3 SV=1 1 201 2.0E-87
sp|P10962|MAK16_YEAST Protein MAK16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAK16 PE=1 SV=2 3 253 4.0E-87
sp|Q7ZYG5|MK16B_XENLA Protein MAK16 homolog B OS=Xenopus laevis GN=mak16-b PE=2 SV=1 1 254 5.0E-65
sp|Q66L33|MK16A_XENLA Protein MAK16 homolog A OS=Xenopus laevis GN=mak16-a PE=2 SV=1 1 183 2.0E-64
sp|Q6P7N1|MAK16_XENTR Protein MAK16 homolog OS=Xenopus tropicalis GN=mak16 PE=2 SV=1 1 183 3.0E-64
sp|Q6NYD4|MAK16_DANRE Protein MAK16 homolog OS=Danio rerio GN=mak16 PE=2 SV=1 1 205 8.0E-62
sp|Q9BXY0|MAK16_HUMAN Protein MAK16 homolog OS=Homo sapiens GN=MAK16 PE=1 SV=2 1 260 4.0E-61
sp|Q1RML7|MAK16_BOVIN Protein MAK16 homolog OS=Bos taurus GN=MAK16 PE=2 SV=1 1 289 8.0E-61
sp|Q8BGS0|MAK16_MOUSE Protein MAK16 homolog OS=Mus musculus GN=Mak16 PE=1 SV=1 1 183 1.0E-59
sp|Q55DJ3|MAK16_DICDI Protein MAK16 homolog OS=Dictyostelium discoideum GN=mak16l PE=3 SV=1 1 206 3.0E-56
sp|P46435|MAK16_SCHMA Protein MAK16 homolog OS=Schistosoma mansoni GN=MAK16 PE=1 SV=2 1 199 2.0E-46
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4913
MASDEIVWQIINQQFCSFKLKTEKKQNFCRNEFNVTGLCNRQSCPLANSRYATIRQHPTKETLYLYMKTIERAHL
PSKTWERIKLSNNYSKALDQIDDRLIYWPKFLIHKCKQRLTRLTQVQMRSRRLAAEEERLGESLVPKLAPKVRHR
EATRERKAEAAAKLERTIERELAERLRQGAYGDQPLNVSEAIWKKVLNAMERGGEGVRDEDLDDGIIEGSDQEDG
DKMVEYVSDVGESEEELDDLEDWLGSDDDDDEDEDEEDEEDDNVDDDDDDDQADEAVLKKRKRAKTFKAKSRKRV
KDDGGREKLLLAKTLEW
Coding >Ophio5|4913
ATGGCGTCGGACGAGATTGTGTGGCAGATTATCAATCAGCAGTTTTGTTCCTTTAAGCTCAAAACAGAAAAGAAG
CAAAACTTTTGCCGCAACGAGTTCAACGTCACCGGTCTCTGTAACCGGCAATCATGCCCGCTCGCAAACTCGCGC
TATGCCACCATACGGCAGCACCCGACCAAGGAAACGCTCTACCTCTACATGAAGACCATCGAGCGCGCCCACCTC
CCGTCCAAGACTTGGGAACGCATCAAGCTGTCCAACAACTACTCCAAGGCGCTCGACCAGATTGACGACCGGCTC
ATCTACTGGCCCAAGTTTCTCATTCACAAATGCAAGCAGCGTCTGACGCGTCTGACGCAGGTGCAGATGCGATCG
CGCAGGTTGGCGGCCGAGGAAGAACGTCTGGGTGAGAGCCTGGTGCCCAAGTTGGCGCCCAAGGTGCGTCATCGC
GAGGCCACTCGCGAACGCAAGGCAGAGGCTGCCGCCAAGTTGGAGAGGACGATTGAGCGCGAGTTGGCGGAGAGG
TTACGTCAGGGAGCCTACGGCGACCAGCCACTCAACGTCAGCGAGGCGATTTGGAAAAAGGTGCTCAACGCAATG
GAGCGTGGCGGCGAGGGCGTCCGGGATGAGGATTTGGACGACGGTATCATCGAGGGGAGTGACCAAGAGGATGGC
GACAAGATGGTCGAGTACGTGTCGGATGTGGGCGAGAGTGAAGAGGAACTGGACGATCTCGAGGATTGGCTCGGC
AGCGACGATGACGACGACGAAGATGAAGATGAAGAAGACGAAGAGGATGACAACGTGGACGACGACGACGATGAC
GACCAAGCGGACGAGGCAGTCCTCAAGAAGCGCAAGCGCGCCAAGACTTTCAAGGCGAAGAGCAGAAAACGCGTC
AAGGACGACGGTGGGCGGGAGAAGCTGCTGCTGGCCAAGACGCTGGAGTGG
Transcript >Ophio5|4913
ATGGCGTCGGACGAGATTGTGTGGCAGATTATCAATCAGCAGTTTTGTTCCTTTAAGCTCAAAACAGAAAAGAAG
CAAAACTTTTGCCGCAACGAGTTCAACGTCACCGGTCTCTGTAACCGGCAATCATGCCCGCTCGCAAACTCGCGC
TATGCCACCATACGGCAGCACCCGACCAAGGAAACGCTCTACCTCTACATGAAGACCATCGAGCGCGCCCACCTC
CCGTCCAAGACTTGGGAACGCATCAAGCTGTCCAACAACTACTCCAAGGCGCTCGACCAGATTGACGACCGGCTC
ATCTACTGGCCCAAGTTTCTCATTCACAAATGCAAGCAGCGTCTGACGCGTCTGACGCAGGTGCAGATGCGATCG
CGCAGGTTGGCGGCCGAGGAAGAACGTCTGGGTGAGAGCCTGGTGCCCAAGTTGGCGCCCAAGGTGCGTCATCGC
GAGGCCACTCGCGAACGCAAGGCAGAGGCTGCCGCCAAGTTGGAGAGGACGATTGAGCGCGAGTTGGCGGAGAGG
TTACGTCAGGGAGCCTACGGCGACCAGCCACTCAACGTCAGCGAGGCGATTTGGAAAAAGGTGCTCAACGCAATG
GAGCGTGGCGGCGAGGGCGTCCGGGATGAGGATTTGGACGACGGTATCATCGAGGGGAGTGACCAAGAGGATGGC
GACAAGATGGTCGAGTACGTGTCGGATGTGGGCGAGAGTGAAGAGGAACTGGACGATCTCGAGGATTGGCTCGGC
AGCGACGATGACGACGACGAAGATGAAGATGAAGAAGACGAAGAGGATGACAACGTGGACGACGACGACGATGAC
GACCAAGCGGACGAGGCAGTCCTCAAGAAGCGCAAGCGCGCCAAGACTTTCAAGGCGAAGAGCAGAAAACGCGTC
AAGGACGACGGTGGGCGGGAGAAGCTGCTGCTGGCCAAGACGCTGGAGTGGTAG
Gene >Ophio5|4913
ATGGCGTCGGACGAGATTGTGTGGCAGATTATCAATCAGCAGTTTTGTTCCTTTAAGCTCAAGTCAGTTGCTGCC
CGTTCTCTCTCCTTGTCGTCGTCCTTGTCGTCCTCGTCGGCCGCATCTTTCTCTTGTCCGCCTTCACTGACAAGA
GTGCAGAACAGAAAAGAAGCAAAACTTTTGCCGCAACGAGTTCAACGTCACCGGTCTCTGTAACCGGCAATCATG
CCCGCTCGCAAACTCGCGCTATGCCACCATACGGCAGCACCCGACCAAGGAAACGCTCTACCTCTACATGAAGAC
CATCGAGCGCGCCCACCTCCCGTCCAAGACTTGGGAACGCATCAAGCTGTCCAACAACTACTCCAAGGCGCTCGA
CCAGATTGACGACCGGCTCATCTACTGGCCCAAGTTTCTCATTCACAAATGCAAGCAGCGTCTGACGCGTCTGAC
GCAGGTGCAGATGCGATCGCGCAGGTTGGCGGCCGAGGAAGAACGTCTGGGTGAGAGCCTGGTGCCCAAGTTGGC
GCCCAAGGTGCGTCATCGCGAGGCCACTCGCGAACGCAAGGCAGAGGCTGCCGCCAAGTTGGAGAGGACGATTGA
GCGCGAGTTGGCGGAGAGGTTACGTCAGGGAGCCTACGGCGACCAGCCACTCAACGTCAGCGAGGCGATTTGGAA
AAAGGTGCTCAACGCAATGGAGCGTGGCGGCGAGGGCGTCCGGGATGAGGATTTGGACGACGGTATCATCGAGGG
GAGTGACCAAGAGGATGGCGACAAGATGGTCGAGTACGTGTCGGATGTGGGCGAGAGTGAAGAGGAACTGGACGA
TCTCGAGGATTGGCTCGGCAGCGACGATGACGACGACGAAGATGAAGATGAAGAAGACGAAGAGGATGACAACGT
GGACGACGACGACGATGACGACCAAGCGGACGAGGCAGTCCTCAAGAAGCGCAAGCGCGCCAAGACTTTCAAGGC
GAAGAGCAGAAAACGCGTCAAGGACGACGGTGGGCGGGAGAAGCTGCTGCTGGCCAAGACGCTGGAGTGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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