Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4910
Gene name
Locationscaffold_396:348..1731
Strand+
Gene length (bp)1383
Transcript length (bp)1242
Coding sequence length (bp)1239
Protein length (aa) 413

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14378 PAP2_3 PAP2 superfamily 7.8E-31 150 363

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 5 22 17
2 105 127 22
3 183 205 22
4 226 248 22
5 295 317 22
6 324 343 19
7 347 369 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4910
MVLGAVLEPLIVVTLLFGGAWVNRCRDEEARAGEKSCDYVVVDDEVADEQGLRRRSGSSTWSGCSGETLAALSRW
RLRRVGVCGWETVLSTPNTAVFRDRLLSRLLRRFPFLVEAWYWALIYWVYQLGRALTALTLVQGTVEVARKHALQ
VIHVEQQLGIFIEPAIQQYFLSRPLLLHWINRVYSFIHIPGTIFFLVCLFYLTTTRRRTHDGTAGPALYQARRRT
MAMCNLVAFVVFTLWPCMPPRLLSDPDYRGQDAAEAKSFGFVDTVHGKGGESSVWTTNRFCNQYAAMPSLHFGYS
LLIGLTIATLPIRGLRWTSWKRMAIVVLGLSYPTLILTAIVATANHFLLDAVAGAVVCAVAWRANGLLLNLCPLE
DYFLWLLRIHKPVPGCDDGGDLLAGEADRRRLLKHEEA
Coding >Ophio5|4910
ATGGTGCTGGGCGCGGTGTTGGAACCGCTGATCGTGGTGACGCTTCTCTTTGGCGGAGCGTGGGTGAATCGATGC
CGCGACGAGGAGGCGAGAGCTGGCGAAAAGTCATGCGATTACGTGGTTGTGGATGACGAGGTTGCTGACGAGCAA
GGGCTGAGAAGACGGTCCGGGTCGAGTACTTGGAGTGGTTGCTCGGGCGAGACGTTGGCGGCGCTGTCGAGGTGG
AGGCTGAGGAGGGTTGGAGTTTGTGGGTGGGAGACTGTGCTTTCGACGCCGAATACTGCCGTCTTCCGAGATCGG
CTTTTGAGTCGTCTTTTGCGCCGCTTTCCGTTTCTTGTTGAGGCTTGGTACTGGGCTCTCATTTACTGGGTCTAT
CAGCTAGGACGAGCCTTGACGGCCCTAACCCTCGTCCAAGGCACAGTCGAGGTAGCGCGCAAACACGCGCTCCAA
GTGATCCACGTCGAACAACAACTGGGAATCTTCATCGAGCCGGCCATCCAACAATATTTCCTATCGCGACCTTTA
CTCTTACACTGGATCAACCGAGTCTACTCCTTCATTCACATCCCCGGCACCATCTTCTTTCTCGTCTGTCTCTTC
TACCTCACGACGACGCGACGGCGCACCCACGACGGTACCGCTGGACCGGCACTGTACCAGGCCAGGCGTCGTACC
ATGGCCATGTGCAATTTAGTGGCCTTTGTCGTCTTCACTCTTTGGCCTTGTATGCCGCCCCGGTTGCTGAGCGAT
CCGGATTATCGCGGCCAGGACGCGGCTGAGGCCAAGAGTTTTGGCTTTGTCGATACGGTTCATGGCAAGGGCGGT
GAGAGTAGCGTTTGGACGACGAATCGATTCTGCAATCAATACGCCGCCATGCCGTCTCTACACTTTGGCTACTCG
CTCCTCATCGGACTCACCATCGCGACGCTCCCGATCAGAGGACTGCGATGGACATCATGGAAACGGATGGCCATC
GTCGTCCTCGGACTCTCGTACCCGACGCTCATCCTCACCGCCATCGTCGCCACCGCCAACCATTTCCTCCTCGAC
GCTGTGGCCGGAGCGGTCGTCTGCGCCGTGGCCTGGCGCGCAAACGGACTGCTTCTCAATCTGTGTCCGCTGGAG
GATTACTTCCTGTGGTTGCTGCGCATTCATAAGCCGGTTCCTGGCTGTGATGATGGGGGGGATTTGCTGGCTGGG
GAGGCGGATAGGAGGAGGTTGCTTAAGCACGAGGAGGCG
Transcript >Ophio5|4910
ATGGTGCTGGGCGCGGTGTTGGAACCGCTGATCGTGGTGACGCTTCTCTTTGGCGGAGCGTGGGTGAATCGATGC
CGCGACGAGGAGGCGAGAGCTGGCGAAAAGTCATGCGATTACGTGGTTGTGGATGACGAGGTTGCTGACGAGCAA
GGGCTGAGAAGACGGTCCGGGTCGAGTACTTGGAGTGGTTGCTCGGGCGAGACGTTGGCGGCGCTGTCGAGGTGG
AGGCTGAGGAGGGTTGGAGTTTGTGGGTGGGAGACTGTGCTTTCGACGCCGAATACTGCCGTCTTCCGAGATCGG
CTTTTGAGTCGTCTTTTGCGCCGCTTTCCGTTTCTTGTTGAGGCTTGGTACTGGGCTCTCATTTACTGGGTCTAT
CAGCTAGGACGAGCCTTGACGGCCCTAACCCTCGTCCAAGGCACAGTCGAGGTAGCGCGCAAACACGCGCTCCAA
GTGATCCACGTCGAACAACAACTGGGAATCTTCATCGAGCCGGCCATCCAACAATATTTCCTATCGCGACCTTTA
CTCTTACACTGGATCAACCGAGTCTACTCCTTCATTCACATCCCCGGCACCATCTTCTTTCTCGTCTGTCTCTTC
TACCTCACGACGACGCGACGGCGCACCCACGACGGTACCGCTGGACCGGCACTGTACCAGGCCAGGCGTCGTACC
ATGGCCATGTGCAATTTAGTGGCCTTTGTCGTCTTCACTCTTTGGCCTTGTATGCCGCCCCGGTTGCTGAGCGAT
CCGGATTATCGCGGCCAGGACGCGGCTGAGGCCAAGAGTTTTGGCTTTGTCGATACGGTTCATGGCAAGGGCGGT
GAGAGTAGCGTTTGGACGACGAATCGATTCTGCAATCAATACGCCGCCATGCCGTCTCTACACTTTGGCTACTCG
CTCCTCATCGGACTCACCATCGCGACGCTCCCGATCAGAGGACTGCGATGGACATCATGGAAACGGATGGCCATC
GTCGTCCTCGGACTCTCGTACCCGACGCTCATCCTCACCGCCATCGTCGCCACCGCCAACCATTTCCTCCTCGAC
GCTGTGGCCGGAGCGGTCGTCTGCGCCGTGGCCTGGCGCGCAAACGGACTGCTTCTCAATCTGTGTCCGCTGGAG
GATTACTTCCTGTGGTTGCTGCGCATTCATAAGCCGGTTCCTGGCTGTGATGATGGGGGGGATTTGCTGGCTGGG
GAGGCGGATAGGAGGAGGTTGCTTAAGCACGAGGAGGCGTAA
Gene >Ophio5|4910
ATGGTGCTGGGCGCGGTGTTGGAACCGCTGATCGTGGTGACGCTTCTCTTTGGCGGAGCGTGGGTGAATCGATGC
CGCGACGAGGAGGCGAGAGCTGGCGAAAAGTCATGCGATTACGTGGTTGTGGATGACGAGGTTGCTGACGAGCAA
GGGCTGAGAAGACGGTCCGGGTCGAGTACTTGGAGTGGTTGCTCGGGCGAGACGTTGGCGGCGCTGTCGAGGTGG
AGGCTGAGGAGGGTTGGAGTTTGTGGGTGGGAGACTGTGCTTTCGACGCCGAATACTGCCGTCTTCCGAGATCGG
CTTTTGAGTCGTCTTTTGCGCCGCTTTCCGTTTCTTGTTGAGGCTTGGTACTGGGCTCTCATTTACTGGGTAAGA
AGAGGGTTCCCATGATGATGACGATGATGATGGTGGTGGTGGCTGACGATGATGGTTACAGGTCTATCAGCTAGG
ACGAGCCTTGACGGCCCTAACCCTCGTCCAAGGCACAGTCGAGGTAGCGCGCAAACACGCGCTCCAAGTGATCCA
CGTCGAACAACAACTGGGAATCTTCATCGAGCCGGCCATCCAACAATATTTCCTATCGCGACCTTTACTCTTACA
CTGGATCAACCGAGTCTACTCCTTCATTCACATCCCCGGCACCATCTTCTTTCTCGTCTGTCTCTTCTACCTCAC
GACGACGCGACGGCGCACCCACGACGGTACCGCTGGACCGGCACTGTACCAGGCCAGGCGTCGTACCATGGCCAT
GTGCAATTTAGTGGCCTTTGTCGTCTTCACTCTTTGGCCTTGTATGCCGCCCCGGTTGCTGAGCGATCCGGATTA
TCGCGGCCAGGACGCGGCTGAGGCCAAGAGTTTTGGCTTTGTCGATACGGTTCATGGCAAGGGCGGTGAGAGTAG
CGTTTGGACGACGAATCGATTCTGCAATCAATACGGTGAGTTGTTTCCTTTTTTTTTTTTTCTTCTTTTGTCATG
TCAGCCTTGGTTGAAGCTAACGGTGCCGTGCCAGCCGCCATGCCGTCTCTACACTTTGGCTACTCGCTCCTCATC
GGACTCACCATCGCGACGCTCCCGATCAGAGGACTGCGATGGACATCATGGAAACGGATGGCCATCGTCGTCCTC
GGACTCTCGTACCCGACGCTCATCCTCACCGCCATCGTCGCCACCGCCAACCATTTCCTCCTCGACGCTGTGGCC
GGAGCGGTCGTCTGCGCCGTGGCCTGGCGCGCAAACGGACTGCTTCTCAATCTGTGTCCGCTGGAGGATTACTTC
CTGTGGTTGCTGCGCATTCATAAGCCGGTTCCTGGCTGTGATGATGGGGGGGATTTGCTGGCTGGGGAGGCGGAT
AGGAGGAGGTTGCTTAAGCACGAGGAGGCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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