Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4900
Gene name
Locationscaffold_394:14686..15481
Strand-
Gene length (bp)795
Transcript length (bp)657
Coding sequence length (bp)654
Protein length (aa) 218

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 31 0.45

Transmembrane Domains

Domain # Start End Length
1 122 144 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4900
MAFSFSSFGSAPSHHHHHHHHRRNRSDRPLHASSSDRRHRSHSSESRSGKRSGSLFGLGNASRGSLFGLGNSSRS
SIFGLGASRSSYYRRSPRHGFMQRAYRRLRRMLRDLVRYAKRHPWKVFLVVIMPLVTGGALSALLARFGLRTPPY
LERVLGIASHAATADSLGLVSDAVRFAGEFGSAADRHGHRHWDRRWDRSDDGGWVDSIKGFFAKDSYF
Coding >Ophio5|4900
ATGGCCTTCAGCTTCTCTTCCTTCGGTAGCGCCCCCTCTCACCACCACCACCACCACCACCATCGCCGGAACCGC
TCCGATCGCCCCCTACACGCCTCCTCCTCCGATCGCCGGCATCGCTCCCACTCGTCCGAGTCCCGCTCCGGAAAG
CGGTCCGGCTCGCTCTTCGGCCTCGGTAACGCCAGCCGCGGCTCCTTGTTCGGCCTGGGCAATTCCAGTCGCTCC
TCTATCTTCGGTCTCGGAGCCAGTCGATCCTCCTACTATAGGCGCTCGCCGCGCCACGGCTTCATGCAGCGTGCC
TATCGCCGTCTTCGCCGCATGCTTCGCGACCTCGTCCGTTACGCAAAGCGCCATCCCTGGAAGGTCTTCCTCGTC
GTCATCATGCCCCTCGTTACCGGAGGCGCCCTTTCCGCTCTGCTCGCCCGCTTCGGCCTCCGAACTCCCCCTTAT
CTCGAACGCGTCCTCGGCATCGCCTCCCACGCCGCCACCGCCGATAGCCTCGGCCTCGTCTCCGACGCCGTCCGC
TTCGCCGGCGAGTTCGGCTCCGCTGCTGACCGCCACGGGCATCGTCACTGGGATCGTCGCTGGGACCGCTCCGAC
GACGGCGGCTGGGTCGACAGCATCAAGGGCTTCTTCGCCAAAGACTCCTACTTC
Transcript >Ophio5|4900
ATGGCCTTCAGCTTCTCTTCCTTCGGTAGCGCCCCCTCTCACCACCACCACCACCACCACCATCGCCGGAACCGC
TCCGATCGCCCCCTACACGCCTCCTCCTCCGATCGCCGGCATCGCTCCCACTCGTCCGAGTCCCGCTCCGGAAAG
CGGTCCGGCTCGCTCTTCGGCCTCGGTAACGCCAGCCGCGGCTCCTTGTTCGGCCTGGGCAATTCCAGTCGCTCC
TCTATCTTCGGTCTCGGAGCCAGTCGATCCTCCTACTATAGGCGCTCGCCGCGCCACGGCTTCATGCAGCGTGCC
TATCGCCGTCTTCGCCGCATGCTTCGCGACCTCGTCCGTTACGCAAAGCGCCATCCCTGGAAGGTCTTCCTCGTC
GTCATCATGCCCCTCGTTACCGGAGGCGCCCTTTCCGCTCTGCTCGCCCGCTTCGGCCTCCGAACTCCCCCTTAT
CTCGAACGCGTCCTCGGCATCGCCTCCCACGCCGCCACCGCCGATAGCCTCGGCCTCGTCTCCGACGCCGTCCGC
TTCGCCGGCGAGTTCGGCTCCGCTGCTGACCGCCACGGGCATCGTCACTGGGATCGTCGCTGGGACCGCTCCGAC
GACGGCGGCTGGGTCGACAGCATCAAGGGCTTCTTCGCCAAAGACTCCTACTTCTAA
Gene >Ophio5|4900
ATGGCCTTCAGCTTCTCTTCCTTCGGTAGCGCCCCCTCTCACCACCACCACCACCACCACCATCGCCGGAACCGC
TCCGATCGCCCCCTACACGCCTCCTCCTCCGATCGCCGGCATCGCTCCCACTCGTCCGAGTCCCGCTCCGGAAAG
CGGTCCGGCTCGCTCTTCGGCCTCGGTAACGCCAGCCGCGGCTCCTTGTTCGGCCTGGGCAATTCCAGTCGCTCC
TCTATCTTCGGTCTCGGAGGTGCGTTCTTCTCCCCCCCCCTTCCCCCCCCTGACAAAAACCGCTCCCCCTGATGT
TGGAAGAGAACCCCCCCCAAAAATTAAAAAAGAAACATCGTCCGTAAAAAATAATAATAAAAATAAATCTCCTTC
CCCGTAGCCAGTCGATCCTCCTACTATAGGCGCTCGCCGCGCCACGGCTTCATGCAGCGTGCCTATCGCCGTCTT
CGCCGCATGCTTCGCGACCTCGTCCGTTACGCAAAGCGCCATCCCTGGAAGGTCTTCCTCGTCGTCATCATGCCC
CTCGTTACCGGAGGCGCCCTTTCCGCTCTGCTCGCCCGCTTCGGCCTCCGAACTCCCCCTTATCTCGAACGCGTC
CTCGGCATCGCCTCCCACGCCGCCACCGCCGATAGCCTCGGCCTCGTCTCCGACGCCGTCCGCTTCGCCGGCGAG
TTCGGCTCCGCTGCTGACCGCCACGGGCATCGTCACTGGGATCGTCGCTGGGACCGCTCCGACGACGGCGGCTGG
GTCGACAGCATCAAGGGCTTCTTCGCCAAAGACTCCTACTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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