Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|490
Gene name
Locationscaffold_111:40877..42275
Strand-
Gene length (bp)1398
Transcript length (bp)1245
Coding sequence length (bp)1242
Protein length (aa) 414

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11327 Egh16-like Egh16-like virulence factor 5.6E-53 15 275

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|490
MRYAIVSAAFIVGASAHGLPVSVKGANDVIMPGLSVTDGTPRDCSSNGCGSQADTTILRDREMQQNPLGRTQGNG
PVSAESAIANFMGTNKATQKNSGQSGVGQEDDLTGLDKVKQKRLAERELFVRGLLDNLLGGGGGLFGGGGGDKAK
GEKNNFAQETSVADTSGMGAQKGLPTTDEEGNFNVIYRQINQDGAGPLTMECDGSSCGKDNSAFQDADIQNNVPG
AIAGLSLATNTEFAMNCSLPQGMVCKAQCGGAQNVCVCRMRNNTPAGPFGGSVALTQSQGAVKRAVAYRLRKRYE
VLKRAKASSASSNSLEKRFKIDSDESPEALAQADANEAADDEALEKGLEKRFKINSDQSPEAVAQADANEAADDE
ALEKGLEKRFAIYSDQTPEALAQADADEELDDETLAKTS
Coding >Ophio5|490
ATGCGTTACGCCATCGTCTCTGCCGCTTTCATCGTCGGTGCTTCGGCACACGGCCTCCCCGTCTCAGTCAAGGGA
GCCAACGACGTCATCATGCCTGGTCTAAGTGTTACCGACGGCACGCCTCGTGACTGCTCCTCAAACGGCTGCGGT
TCTCAGGCCGACACCACCATCCTCCGGGACCGTGAGATGCAGCAGAACCCTCTGGGAAGAACCCAAGGCAACGGT
CCAGTATCGGCAGAAAGCGCCATCGCCAACTTCATGGGTACCAACAAGGCCACGCAGAAGAACAGTGGCCAGAGT
GGTGTCGGCCAAGAGGACGACCTCACCGGTCTCGACAAGGTCAAGCAGAAGCGCCTCGCTGAGCGAGAGTTATTT
GTCCGCGGCCTCCTCGATAACCTCCTCGGCGGCGGCGGCGGTCTCTTCGGTGGTGGTGGCGGTGATAAGGCCAAG
GGCGAGAAGAACAACTTCGCCCAAGAGACATCCGTTGCCGACACGAGTGGCATGGGGGCCCAGAAGGGTCTTCCC
ACGACGGACGAGGAGGGCAACTTCAACGTCATCTATCGTCAGATCAATCAGGATGGCGCTGGCCCCCTGACCATG
GAGTGTGACGGCTCTAGTTGCGGCAAGGACAACAGCGCCTTCCAGGACGCTGACATCCAGAACAACGTTCCCGGA
GCCATTGCCGGCCTTTCCCTGGCGACCAACACCGAGTTCGCCATGAACTGCTCCCTTCCTCAGGGCATGGTCTGT
AAGGCTCAGTGCGGCGGAGCCCAGAACGTCTGCGTCTGCCGCATGCGCAACAATACTCCTGCCGGCCCCTTTGGA
GGCTCCGTTGCCCTCACTCAGTCTCAGGGCGCCGTCAAGCGAGCCGTCGCCTACCGCCTGCGGAAGCGTTACGAA
GTCCTGAAGCGCGCCAAGGCGAGCAGCGCCTCCTCCAATAGCCTCGAGAAGCGCTTCAAGATCGATTCTGACGAG
AGCCCCGAGGCCCTCGCTCAAGCCGATGCCAATGAAGCGGCTGACGATGAAGCTCTGGAGAAGGGCCTCGAGAAG
CGCTTCAAGATCAATTCTGACCAGAGCCCCGAAGCCGTCGCCCAAGCCGATGCCAATGAAGCGGCTGACGATGAA
GCACTGGAGAAGGGCCTCGAGAAGCGCTTCGCGATCTACTCTGACCAGACCCCCGAAGCCCTCGCCCAAGCCGAT
GCCGATGAAGAGCTTGACGACGAGACCCTGGCCAAGACATCT
Transcript >Ophio5|490
ATGCGTTACGCCATCGTCTCTGCCGCTTTCATCGTCGGTGCTTCGGCACACGGCCTCCCCGTCTCAGTCAAGGGA
GCCAACGACGTCATCATGCCTGGTCTAAGTGTTACCGACGGCACGCCTCGTGACTGCTCCTCAAACGGCTGCGGT
TCTCAGGCCGACACCACCATCCTCCGGGACCGTGAGATGCAGCAGAACCCTCTGGGAAGAACCCAAGGCAACGGT
CCAGTATCGGCAGAAAGCGCCATCGCCAACTTCATGGGTACCAACAAGGCCACGCAGAAGAACAGTGGCCAGAGT
GGTGTCGGCCAAGAGGACGACCTCACCGGTCTCGACAAGGTCAAGCAGAAGCGCCTCGCTGAGCGAGAGTTATTT
GTCCGCGGCCTCCTCGATAACCTCCTCGGCGGCGGCGGCGGTCTCTTCGGTGGTGGTGGCGGTGATAAGGCCAAG
GGCGAGAAGAACAACTTCGCCCAAGAGACATCCGTTGCCGACACGAGTGGCATGGGGGCCCAGAAGGGTCTTCCC
ACGACGGACGAGGAGGGCAACTTCAACGTCATCTATCGTCAGATCAATCAGGATGGCGCTGGCCCCCTGACCATG
GAGTGTGACGGCTCTAGTTGCGGCAAGGACAACAGCGCCTTCCAGGACGCTGACATCCAGAACAACGTTCCCGGA
GCCATTGCCGGCCTTTCCCTGGCGACCAACACCGAGTTCGCCATGAACTGCTCCCTTCCTCAGGGCATGGTCTGT
AAGGCTCAGTGCGGCGGAGCCCAGAACGTCTGCGTCTGCCGCATGCGCAACAATACTCCTGCCGGCCCCTTTGGA
GGCTCCGTTGCCCTCACTCAGTCTCAGGGCGCCGTCAAGCGAGCCGTCGCCTACCGCCTGCGGAAGCGTTACGAA
GTCCTGAAGCGCGCCAAGGCGAGCAGCGCCTCCTCCAATAGCCTCGAGAAGCGCTTCAAGATCGATTCTGACGAG
AGCCCCGAGGCCCTCGCTCAAGCCGATGCCAATGAAGCGGCTGACGATGAAGCTCTGGAGAAGGGCCTCGAGAAG
CGCTTCAAGATCAATTCTGACCAGAGCCCCGAAGCCGTCGCCCAAGCCGATGCCAATGAAGCGGCTGACGATGAA
GCACTGGAGAAGGGCCTCGAGAAGCGCTTCGCGATCTACTCTGACCAGACCCCCGAAGCCCTCGCCCAAGCCGAT
GCCGATGAAGAGCTTGACGACGAGACCCTGGCCAAGACATCTTAA
Gene >Ophio5|490
ATGCGTTACGCCATCGTCTCTGCCGCTTTCATCGTCGGTGCTTCGGCACACGGCCTCCCCGTCTCAGTCAAGGGA
GCCAACGACGTCATCATGCCTGGTCTAAGTGGTATGTCTTTTTTTGTTTTCTTCCCATCAAATCAATTCACTCAC
CCCAACGGACCTTGGCCCCTGACTGTCCCCCTTCAGTTACCGACGGCACGCCTCGTGACTGCTCCTCAAACGGCT
GCGGTTCTCAGGCCGACACCACCATCCTCCGGGACCGTGAGATGCAGCAGAACCCTCTGGGAAGAACCCAAGGCA
ACGGTCCAGTATCGGCAGAAAGCGCCATCGCCAACTTCATGGGTACCAACAAGGCCACGCAGAAGAACAGTGGCC
AGAGTGGTGTCGGCCAAGAGGACGACCTCACCGGTCTCGACAAGGTCAAGCAGAAGCGCCTCGCTGAGCGAGAGT
TATTTGTCCGCGGCCTCCTCGATAACCTCCTCGGCGGCGGCGGCGGTCTCTTCGGTGGTGGTGGCGGTGATAAGG
CCAAGGGCGAGAAGAACAACTTCGCCCAAGAGACATCCGTTGCCGACACGAGTGGCATGGGGGCCCAGAAGGGTC
TTCCCACGACGGACGAGGAGGGCAACTTCAACGTCATCTATCGTCAGGTTCGTTTTCTCATCGTTGTGGAGTCAT
GGTTTGAGCCCCTGACTGACACGACCTTCTTCCCCTCCCCCCCAGATCAATCAGGATGGCGCTGGCCCCCTGACC
ATGGAGTGTGACGGCTCTAGTTGCGGCAAGGACAACAGCGCCTTCCAGGACGCTGACATCCAGAACAACGTTCCC
GGAGCCATTGCCGGCCTTTCCCTGGCGACCAACACCGAGTTCGCCATGAACTGCTCCCTTCCTCAGGGCATGGTC
TGTAAGGCTCAGTGCGGCGGAGCCCAGAACGTCTGCGTCTGCCGCATGCGCAACAATACTCCTGCCGGCCCCTTT
GGAGGCTCCGTTGCCCTCACTCAGTCTCAGGGCGCCGTCAAGCGAGCCGTCGCCTACCGCCTGCGGAAGCGTTAC
GAAGTCCTGAAGCGCGCCAAGGCGAGCAGCGCCTCCTCCAATAGCCTCGAGAAGCGCTTCAAGATCGATTCTGAC
GAGAGCCCCGAGGCCCTCGCTCAAGCCGATGCCAATGAAGCGGCTGACGATGAAGCTCTGGAGAAGGGCCTCGAG
AAGCGCTTCAAGATCAATTCTGACCAGAGCCCCGAAGCCGTCGCCCAAGCCGATGCCAATGAAGCGGCTGACGAT
GAAGCACTGGAGAAGGGCCTCGAGAAGCGCTTCGCGATCTACTCTGACCAGACCCCCGAAGCCCTCGCCCAAGCC
GATGCCGATGAAGAGCTTGACGACGAGACCCTGGCCAAGACATCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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