Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4896
Gene name
Locationscaffold_394:5112..6110
Strand-
Gene length (bp)998
Transcript length (bp)924
Coding sequence length (bp)921
Protein length (aa) 307

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 240 262 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4896
MSNLVGHDSSRLEIRRSLSGLAVPARLHRHQPRHPASHGRLQGNDRAEPRAELMRHSVDLLRPDAAAVSPDHSRR
ASWSQPRGDAAEADAAVWRENLRLEREKASVRQDILKRSLADLSAFSTSITKQLDDTYYAVLEKTSTLQNTVASV
NGLAETLRGTCDSFDEDSRALESDTLRQVIAMGHFEAQEAKISGLQSRILQGRTRIQKVTDRVDTVRRRIEGWER
ADEAWREKTRKRLKIMWSVTSVVTILFVALVVGAHYMTRGLGDIGAGSTPSKRPLSSAGGSAVKEWATRRGDDDQ
LRLLDEL
Coding >Ophio5|4896
ATGTCGAACCTTGTTGGCCATGACTCGTCGCGGCTGGAGATCAGGCGGTCGCTCTCCGGATTGGCGGTCCCGGCC
AGGTTGCACCGACACCAGCCGCGGCACCCCGCAAGCCACGGCCGGCTGCAAGGCAACGACAGAGCCGAGCCGAGA
GCCGAGCTGATGCGACATTCGGTCGACCTGCTCCGGCCGGACGCGGCGGCCGTGAGTCCGGACCACAGCCGACGG
GCGAGCTGGTCCCAGCCGCGGGGAGACGCGGCTGAGGCGGACGCGGCCGTCTGGAGGGAAAACCTGCGGTTGGAG
CGGGAGAAGGCGTCGGTCCGGCAAGACATCCTGAAGCGGTCGCTGGCCGACCTCAGTGCATTCTCAACCTCGATA
ACCAAGCAGCTCGATGACACGTACTACGCGGTGCTGGAGAAGACGAGCACGCTACAGAATACCGTCGCCTCCGTC
AATGGCCTGGCCGAAACGCTGCGTGGCACGTGCGACAGTTTCGACGAAGACTCGCGCGCTCTTGAGAGCGACACG
CTGAGGCAGGTCATCGCCATGGGCCACTTCGAGGCGCAGGAAGCCAAGATTTCGGGGCTCCAGAGCCGCATCTTA
CAGGGTCGCACCAGGATCCAGAAGGTGACGGACCGGGTCGACACCGTCAGGCGACGAATAGAAGGCTGGGAGCGG
GCCGACGAGGCGTGGCGTGAGAAGACGCGCAAGCGACTCAAGATTATGTGGTCAGTCACGTCCGTCGTCACCATC
TTGTTCGTCGCCCTTGTCGTCGGCGCCCACTACATGACCAGAGGGCTTGGCGATATCGGTGCGGGCTCCACGCCG
TCGAAGCGCCCTCTGTCTTCGGCCGGGGGCAGCGCAGTCAAGGAGTGGGCGACGCGGCGAGGTGACGACGACCAG
TTGCGGTTGTTGGACGAGCTT
Transcript >Ophio5|4896
ATGTCGAACCTTGTTGGCCATGACTCGTCGCGGCTGGAGATCAGGCGGTCGCTCTCCGGATTGGCGGTCCCGGCC
AGGTTGCACCGACACCAGCCGCGGCACCCCGCAAGCCACGGCCGGCTGCAAGGCAACGACAGAGCCGAGCCGAGA
GCCGAGCTGATGCGACATTCGGTCGACCTGCTCCGGCCGGACGCGGCGGCCGTGAGTCCGGACCACAGCCGACGG
GCGAGCTGGTCCCAGCCGCGGGGAGACGCGGCTGAGGCGGACGCGGCCGTCTGGAGGGAAAACCTGCGGTTGGAG
CGGGAGAAGGCGTCGGTCCGGCAAGACATCCTGAAGCGGTCGCTGGCCGACCTCAGTGCATTCTCAACCTCGATA
ACCAAGCAGCTCGATGACACGTACTACGCGGTGCTGGAGAAGACGAGCACGCTACAGAATACCGTCGCCTCCGTC
AATGGCCTGGCCGAAACGCTGCGTGGCACGTGCGACAGTTTCGACGAAGACTCGCGCGCTCTTGAGAGCGACACG
CTGAGGCAGGTCATCGCCATGGGCCACTTCGAGGCGCAGGAAGCCAAGATTTCGGGGCTCCAGAGCCGCATCTTA
CAGGGTCGCACCAGGATCCAGAAGGTGACGGACCGGGTCGACACCGTCAGGCGACGAATAGAAGGCTGGGAGCGG
GCCGACGAGGCGTGGCGTGAGAAGACGCGCAAGCGACTCAAGATTATGTGGTCAGTCACGTCCGTCGTCACCATC
TTGTTCGTCGCCCTTGTCGTCGGCGCCCACTACATGACCAGAGGGCTTGGCGATATCGGTGCGGGCTCCACGCCG
TCGAAGCGCCCTCTGTCTTCGGCCGGGGGCAGCGCAGTCAAGGAGTGGGCGACGCGGCGAGGTGACGACGACCAG
TTGCGGTTGTTGGACGAGCTTTAA
Gene >Ophio5|4896
ATGTCGAACCTTGTTGGCCATGACTCGTCGCGGCTGGAGATCAGGCGGTCGCTCTCCGGATTGGCGGTCCCGGCC
AGGTTGCACCGACACCAGCCGCGGCACCCCGCAAGCCACGGCCGGCTGCAAGGCAACGACAGAGCCGAGCCGAGA
GCCGAGCTGATGCGACATTCGGTCGACCTGCTCCGGCCGGACGCGGCGGCCGTGAGTCCGGACCACAGCCGACGG
GCGAGCTGGTCCCAGCCGCGGGGAGACGCGGCTGAGGCGGACGCGGCCGTCTGGAGGGAAAACCTGCGGTTGGAG
CGGGAGAAGGCGTCGGTCCGGCAAGAGTTGGTTTTCCCTCTCCCCTTCCCCCCCTTAGTTGACGGGCTTCATCCG
CTGACGCCGCCGTGTCGGGTGCCAGCATCCTGAAGCGGTCGCTGGCCGACCTCAGTGCATTCTCAACCTCGATAA
CCAAGCAGCTCGATGACACGTACTACGCGGTGCTGGAGAAGACGAGCACGCTACAGAATACCGTCGCCTCCGTCA
ATGGCCTGGCCGAAACGCTGCGTGGCACGTGCGACAGTTTCGACGAAGACTCGCGCGCTCTTGAGAGCGACACGC
TGAGGCAGGTCATCGCCATGGGCCACTTCGAGGCGCAGGAAGCCAAGATTTCGGGGCTCCAGAGCCGCATCTTAC
AGGGTCGCACCAGGATCCAGAAGGTGACGGACCGGGTCGACACCGTCAGGCGACGAATAGAAGGCTGGGAGCGGG
CCGACGAGGCGTGGCGTGAGAAGACGCGCAAGCGACTCAAGATTATGTGGTCAGTCACGTCCGTCGTCACCATCT
TGTTCGTCGCCCTTGTCGTCGGCGCCCACTACATGACCAGAGGGCTTGGCGATATCGGTGCGGGCTCCACGCCGT
CGAAGCGCCCTCTGTCTTCGGCCGGGGGCAGCGCAGTCAAGGAGTGGGCGACGCGGCGAGGTGACGACGACCAGT
TGCGGTTGTTGGACGAGCTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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