Fungal Genomics

General Properties

Protein ID	Ophio5|4866
Gene name
Location	scaffold_39:63529..63766
Strand	-
Gene length (bp)	237
Transcript length (bp)	237
Coding sequence length (bp)	234
Protein length (aa)	78

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Extracellular	Signal peptide	0.0815	0.0364	0.9822	0.0404	0.0492	0.0141	0.0761	0.0952	0.1191	0.0073

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 24	0.999658

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	10.42	0.0	23.21
CcL	In ants, during behavior modification	14.08	0.0	30.93
CcD	In ants, recently dead	1.27	0.0	2.80

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.680820	no
SC16a	CcD	0.256797	no
CcL	CcD	0.255907	no

Orthologs

Orthofinder run ID	4
Orthogroup	8341
Change Orthofinder run	4: Insect Pathogens

Species	Protein ID
Ophiocordyceps camponoti-rufipedis	Ophun1|4956
Ophiocordyceps kimflemingae	Ophio5|4866 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5|4866 MRSIILAALSPAFVLLTAASPAEMSSAQVAAPDAGCYWSGTAPFCAGHCPSPYVECKQEKQNCWTGHKSRCCNPS SEC
Coding	>Ophio5|4866 ATGCGCTCCATCATCCTTGCTGCCCTCTCTCCCGCCTTCGTTCTCCTCACGGCGGCAAGCCCGGCCGAAATGTCG TCGGCCCAAGTCGCCGCCCCCGATGCCGGCTGCTACTGGAGTGGTACGGCCCCGTTCTGCGCCGGCCACTGTCCG TCGCCCTACGTCGAGTGCAAGCAGGAGAAGCAGAACTGCTGGACCGGTCACAAGTCGCGCTGCTGCAACCCTTCT TCCGAGTGT
Transcript	>Ophio5|4866 ATGCGCTCCATCATCCTTGCTGCCCTCTCTCCCGCCTTCGTTCTCCTCACGGCGGCAAGCCCGGCCGAAATGTCG TCGGCCCAAGTCGCCGCCCCCGATGCCGGCTGCTACTGGAGTGGTACGGCCCCGTTCTGCGCCGGCCACTGTCCG TCGCCCTACGTCGAGTGCAAGCAGGAGAAGCAGAACTGCTGGACCGGTCACAAGTCGCGCTGCTGCAACCCTTCT TCCGAGTGTTAG
Gene	>Ophio5|4866 ATGCGCTCCATCATCCTTGCTGCCCTCTCTCCCGCCTTCGTTCTCCTCACGGCGGCAAGCCCGGCCGAAATGTCG TCGGCCCAAGTCGCCGCCCCCGATGCCGGCTGCTACTGGAGTGGTACGGCCCCGTTCTGCGCCGGCCACTGTCCG TCGCCCTACGTCGAGTGCAAGCAGGAGAAGCAGAACTGCTGGACCGGTCACAAGTCGCGCTGCTGCAACCCTTCT TCCGAGTGTTAG