Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4860
Gene name
Locationscaffold_39:47092..47698
Strand+
Gene length (bp)606
Transcript length (bp)543
Coding sequence length (bp)540
Protein length (aa) 180

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 109 131 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4860
MEARPEQGRLSMTAPVRLLFGSLTSGFIGFTLGSLQGGQTAELRFRAEHAHKMPDSTTGWYLYHKTKNYHVMHGG
IREGLRMGIKTSFWASLALGLESTVDGCRGASDMFSTVVASLTVAGAFSLYHRLTLSMVARTARMGLLFGLAYGS
VQDLVGLARDRPIGYVEFIRRRLGSASKAR
Coding >Ophio5|4860
ATGGAAGCTCGCCCCGAACAAGGCCGGCTCTCTATGACGGCACCGGTCCGACTACTTTTCGGTTCGCTGACATCC
GGCTTCATCGGCTTCACTCTTGGCTCCTTGCAGGGCGGCCAGACGGCGGAGCTGCGCTTCCGTGCCGAGCATGCG
CACAAGATGCCCGACTCAACGACAGGCTGGTATCTCTATCACAAGACCAAAAACTATCACGTCATGCACGGAGGC
ATCCGTGAGGGACTCCGCATGGGGATCAAGACGAGCTTCTGGGCCTCTCTGGCCCTCGGTCTGGAGAGCACCGTC
GACGGCTGTCGCGGCGCCAGCGACATGTTCTCAACCGTCGTCGCCAGCCTGACCGTTGCTGGCGCCTTTTCCCTC
TACCACAGACTTACGCTGTCGATGGTCGCTCGCACCGCCAGAATGGGCCTCCTGTTTGGGCTCGCGTACGGGAGT
GTCCAGGATCTCGTCGGCTTAGCCCGGGATAGACCTATCGGCTATGTCGAGTTCATCCGACGCCGGCTCGGCTCT
GCGTCCAAAGCTCGC
Transcript >Ophio5|4860
ATGGAAGCTCGCCCCGAACAAGGCCGGCTCTCTATGACGGCACCGGTCCGACTACTTTTCGGTTCGCTGACATCC
GGCTTCATCGGCTTCACTCTTGGCTCCTTGCAGGGCGGCCAGACGGCGGAGCTGCGCTTCCGTGCCGAGCATGCG
CACAAGATGCCCGACTCAACGACAGGCTGGTATCTCTATCACAAGACCAAAAACTATCACGTCATGCACGGAGGC
ATCCGTGAGGGACTCCGCATGGGGATCAAGACGAGCTTCTGGGCCTCTCTGGCCCTCGGTCTGGAGAGCACCGTC
GACGGCTGTCGCGGCGCCAGCGACATGTTCTCAACCGTCGTCGCCAGCCTGACCGTTGCTGGCGCCTTTTCCCTC
TACCACAGACTTACGCTGTCGATGGTCGCTCGCACCGCCAGAATGGGCCTCCTGTTTGGGCTCGCGTACGGGAGT
GTCCAGGATCTCGTCGGCTTAGCCCGGGATAGACCTATCGGCTATGTCGAGTTCATCCGACGCCGGCTCGGCTCT
GCGTCCAAAGCTCGCTGA
Gene >Ophio5|4860
ATGGAAGCTCGCCCCGAACAAGGCCGGCTCTCTATGACGGCACCGGTCCGACTACTTTTCGGTTCGCTGACATCC
GGCTTCATCGGCTTCACTCTTGGCTCCTTGCAGGGCGGCCAGACGGCGGAGCTGCGCTTCCGTGCCGAGCATGCG
CACAAGATGCCCGACTCAACGACAGGCTGGTATCTCTATCACAAGACCAAAAACTATCACGTCATGCACGGAGGC
ATCCGTGAGGGACTCCGCATGGGGATCAAGACGAGCTTCTGGGCCTCTCTGGCCCTCGGTCTGGAGAGCACCGTC
GACGGCTGTCGCGGCGCCAGCGACATGTTCTCAACCGTCGTCGCCAGCCTGACCGTTGCTGGCGCCTTTTCCCTC
TACCGTAGGTTTCCTTTGATGTCCCGCCCACGAGCGAGGGCTGATTTGATAATTTGGGCCGCCACAGACAGACTT
ACGCTGTCGATGGTCGCTCGCACCGCCAGAATGGGCCTCCTGTTTGGGCTCGCGTACGGGAGTGTCCAGGATCTC
GTCGGCTTAGCCCGGGATAGACCTATCGGCTATGTCGAGTTCATCCGACGCCGGCTCGGCTCTGCGTCCAAAGCT
CGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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