Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4851
Gene name
Locationscaffold_39:31264..32269
Strand-
Gene length (bp)1005
Transcript length (bp)1005
Coding sequence length (bp)1002
Protein length (aa) 334

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04488 Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif 6.2E-10 106 155

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q10323|IMT3_SCHPO Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.11c PE=1 SV=1 62 333 5.0E-23
sp|O14084|IMT1_SCHPO Inositol phosphoceramide mannosyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imt1 PE=3 SV=2 12 273 1.0E-19
sp|P38287|CSH1_YEAST Mannosyl phosphorylinositol ceramide synthase CSH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSH1 PE=1 SV=1 32 296 2.0E-17
sp|P33300|SUR1_YEAST Mannosyl phosphorylinositol ceramide synthase SUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR1 PE=1 SV=1 47 296 2.0E-17
sp|Q9UT67|IMT2_SCHPO Inositol phosphoceramide mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4F11.04c PE=3 SV=1 1 272 6.0E-16

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 12 31 19
2 282 304 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4851
MAALVRWSSRKVIALMLLSLSAIVVVHQLSYISDIDLASRLPESLHVIRECSTGPAEADTESIPKRVHQIWKTNN
VSTYPIEATHDAWKTMLEPMNYTVKLWAEAEIVHLIAARYPWLLSTYQGYSQNIQRADVARLVVLHAEGGIYADL
DVHPVSVQQLSCWRQLGLQALFAPTSGTQGISNHFLMAEKGSAFLQWALHEAKRRGGSSSQRIIFPYLQVFWSTG
PLMVNSAYRSYASHMGETDKPVGVAEESYSGSVIWHAAGRSWHKSDGRFLNYVADRVGVASSYIVILACVVIIAI
AAITARRYFKARVLTARDGSLSPIFERMRTFHKP
Coding >Ophio5|4851
ATGGCCGCCCTCGTGCGATGGAGTTCACGAAAGGTCATTGCACTGATGCTCCTCTCCCTGTCCGCCATCGTCGTC
GTCCACCAACTCAGCTACATCAGCGACATCGACCTCGCCAGTCGATTACCCGAGTCTCTGCACGTCATCAGGGAG
TGCTCAACTGGTCCGGCCGAAGCCGACACTGAATCTATTCCCAAGCGCGTTCACCAGATCTGGAAGACGAACAAT
GTGTCGACCTACCCGATCGAGGCGACCCATGACGCCTGGAAGACCATGTTGGAGCCCATGAACTACACCGTCAAG
TTATGGGCCGAGGCGGAAATCGTCCATCTCATCGCGGCCAGGTATCCCTGGCTACTGTCGACTTACCAGGGCTAT
TCACAAAACATTCAACGAGCCGACGTTGCCAGGCTGGTGGTCCTCCACGCCGAGGGAGGCATCTACGCCGATCTG
GACGTCCATCCTGTTTCCGTCCAACAGCTCTCCTGCTGGCGTCAACTCGGTCTCCAAGCCCTCTTTGCCCCGACC
TCGGGAACGCAGGGCATCAGCAACCACTTCCTCATGGCCGAGAAGGGCTCCGCCTTTCTCCAATGGGCTCTGCAC
GAAGCCAAACGGCGAGGAGGATCTTCGTCCCAACGCATCATCTTCCCTTACCTCCAGGTCTTTTGGTCGACGGGT
CCCCTGATGGTCAACTCGGCCTATCGCTCCTACGCCTCGCATATGGGCGAGACGGACAAGCCAGTGGGCGTCGCG
GAAGAGAGCTACAGCGGATCCGTCATCTGGCACGCTGCGGGACGATCGTGGCACAAGTCAGACGGACGCTTCCTA
AACTACGTCGCCGATCGTGTGGGCGTGGCGAGTTCCTACATCGTCATTCTCGCCTGTGTCGTCATCATCGCCATC
GCAGCTATCACGGCACGACGATACTTCAAAGCCCGTGTACTCACCGCACGTGACGGGTCGCTATCTCCCATCTTT
GAACGGATGCGGACCTTTCACAAGCCA
Transcript >Ophio5|4851
ATGGCCGCCCTCGTGCGATGGAGTTCACGAAAGGTCATTGCACTGATGCTCCTCTCCCTGTCCGCCATCGTCGTC
GTCCACCAACTCAGCTACATCAGCGACATCGACCTCGCCAGTCGATTACCCGAGTCTCTGCACGTCATCAGGGAG
TGCTCAACTGGTCCGGCCGAAGCCGACACTGAATCTATTCCCAAGCGCGTTCACCAGATCTGGAAGACGAACAAT
GTGTCGACCTACCCGATCGAGGCGACCCATGACGCCTGGAAGACCATGTTGGAGCCCATGAACTACACCGTCAAG
TTATGGGCCGAGGCGGAAATCGTCCATCTCATCGCGGCCAGGTATCCCTGGCTACTGTCGACTTACCAGGGCTAT
TCACAAAACATTCAACGAGCCGACGTTGCCAGGCTGGTGGTCCTCCACGCCGAGGGAGGCATCTACGCCGATCTG
GACGTCCATCCTGTTTCCGTCCAACAGCTCTCCTGCTGGCGTCAACTCGGTCTCCAAGCCCTCTTTGCCCCGACC
TCGGGAACGCAGGGCATCAGCAACCACTTCCTCATGGCCGAGAAGGGCTCCGCCTTTCTCCAATGGGCTCTGCAC
GAAGCCAAACGGCGAGGAGGATCTTCGTCCCAACGCATCATCTTCCCTTACCTCCAGGTCTTTTGGTCGACGGGT
CCCCTGATGGTCAACTCGGCCTATCGCTCCTACGCCTCGCATATGGGCGAGACGGACAAGCCAGTGGGCGTCGCG
GAAGAGAGCTACAGCGGATCCGTCATCTGGCACGCTGCGGGACGATCGTGGCACAAGTCAGACGGACGCTTCCTA
AACTACGTCGCCGATCGTGTGGGCGTGGCGAGTTCCTACATCGTCATTCTCGCCTGTGTCGTCATCATCGCCATC
GCAGCTATCACGGCACGACGATACTTCAAAGCCCGTGTACTCACCGCACGTGACGGGTCGCTATCTCCCATCTTT
GAACGGATGCGGACCTTTCACAAGCCATAG
Gene >Ophio5|4851
ATGGCCGCCCTCGTGCGATGGAGTTCACGAAAGGTCATTGCACTGATGCTCCTCTCCCTGTCCGCCATCGTCGTC
GTCCACCAACTCAGCTACATCAGCGACATCGACCTCGCCAGTCGATTACCCGAGTCTCTGCACGTCATCAGGGAG
TGCTCAACTGGTCCGGCCGAAGCCGACACTGAATCTATTCCCAAGCGCGTTCACCAGATCTGGAAGACGAACAAT
GTGTCGACCTACCCGATCGAGGCGACCCATGACGCCTGGAAGACCATGTTGGAGCCCATGAACTACACCGTCAAG
TTATGGGCCGAGGCGGAAATCGTCCATCTCATCGCGGCCAGGTATCCCTGGCTACTGTCGACTTACCAGGGCTAT
TCACAAAACATTCAACGAGCCGACGTTGCCAGGCTGGTGGTCCTCCACGCCGAGGGAGGCATCTACGCCGATCTG
GACGTCCATCCTGTTTCCGTCCAACAGCTCTCCTGCTGGCGTCAACTCGGTCTCCAAGCCCTCTTTGCCCCGACC
TCGGGAACGCAGGGCATCAGCAACCACTTCCTCATGGCCGAGAAGGGCTCCGCCTTTCTCCAATGGGCTCTGCAC
GAAGCCAAACGGCGAGGAGGATCTTCGTCCCAACGCATCATCTTCCCTTACCTCCAGGTCTTTTGGTCGACGGGT
CCCCTGATGGTCAACTCGGCCTATCGCTCCTACGCCTCGCATATGGGCGAGACGGACAAGCCAGTGGGCGTCGCG
GAAGAGAGCTACAGCGGATCCGTCATCTGGCACGCTGCGGGACGATCGTGGCACAAGTCAGACGGACGCTTCCTA
AACTACGTCGCCGATCGTGTGGGCGTGGCGAGTTCCTACATCGTCATTCTCGCCTGTGTCGTCATCATCGCCATC
GCAGCTATCACGGCACGACGATACTTCAAAGCCCGTGTACTCACCGCACGTGACGGGTCGCTATCTCCCATCTTT
GAACGGATGCGGACCTTTCACAAGCCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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