Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4839
Gene name
Locationscaffold_39:567..2309
Strand+
Gene length (bp)1742
Transcript length (bp)1578
Coding sequence length (bp)1575
Protein length (aa) 525

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 151 173 22
2 234 256 22
3 278 300 22
4 321 343 22
5 348 367 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4839
MRKSGVCISRPSLLVKKKQGPPARLGPHPAMTLQEQTCIHDDRCAPSTTSDDGGAVPSRDTAVVKEEDAVVAVVD
DANKDEDEDGEGEEDDGGQDDKRCRVRLVRSSPSNSFRLAPASRLENNLPFAVGLLELANAGDFAANVWNQIPVP
VYAMVLMALGGSLALIMSLVALFDVRRAWSNVQFLRRQRRRLRLRQQSRRRQQQQQQQQQQQRLDAALRAVSFRE
LWSEIINRLAMDILMGAGALLIAAGTFMAMGGDDERVWNASNILSGYLGNTPLALFALVNSSWALFLAATAQSHV
RATRRRGMAPAAELVKRRSRNVQVFCVINGTAAVVGGVGSMLTATKWWAYVLLAPVVVSSVFCNLWWRRRVGYTR
ARGRVSAETLESDLEYAAWAEVTLREKPSPSTLTTKTYLSRLIASPTSLSDVLGWLQRHDLFPDMCVFALADASI
REALVLSTPDELDVGIAELLALPPALHPRLLIAADACVARIGRKHFRHRERYLAELLGTYCTVKTRAEDEEVGEK
Coding >Ophio5|4839
ATGAGAAAGTCTGGCGTATGTATATCTCGTCCTTCTCTACTCGTAAAGAAGAAGCAGGGTCCCCCCGCCCGCCTC
GGGCCCCATCCGGCCATGACGCTACAGGAGCAGACATGCATCCACGACGACCGCTGCGCCCCCTCGACGACCAGC
GACGACGGGGGGGCTGTGCCGAGCCGAGACACAGCCGTTGTGAAGGAGGAGGATGCCGTTGTTGCCGTGGTCGAT
GATGCCAATAAAGACGAAGACGAAGACGGAGAAGGAGAAGAAGATGACGGAGGCCAAGATGATAAAAGATGTCGC
GTTCGACTTGTCCGGTCTTCCCCTTCCAATTCCTTCCGTCTCGCGCCCGCTTCCCGACTCGAAAACAACCTCCCC
TTTGCCGTCGGTCTTCTCGAGCTCGCAAACGCAGGAGACTTCGCGGCGAACGTATGGAACCAAATCCCCGTCCCC
GTCTACGCCATGGTCTTAATGGCCCTCGGCGGCAGCCTCGCCTTGATCATGAGTCTCGTCGCACTATTCGACGTA
CGACGGGCATGGAGCAACGTACAATTCCTACGACGACAACGACGTCGACTCCGACTCCGCCAACAATCACGACGA
CGACAACAACAACAACAACAACAACAACAACAACAGCGTCTCGACGCCGCGCTCCGAGCCGTATCGTTTCGCGAA
CTGTGGAGCGAAATCATCAACCGACTCGCCATGGATATCCTCATGGGTGCCGGCGCGCTACTCATCGCGGCCGGA
ACATTCATGGCCATGGGCGGCGATGACGAACGCGTCTGGAACGCCAGTAATATCCTATCCGGCTATTTGGGAAAC
ACACCTCTTGCCCTCTTCGCCCTCGTCAACTCGTCCTGGGCGCTATTCCTGGCCGCTACCGCGCAGAGTCATGTT
CGGGCCACGAGACGGAGGGGAATGGCGCCGGCGGCTGAGCTGGTCAAGAGGAGGAGTCGGAATGTGCAGGTTTTT
TGCGTCATCAATGGCACCGCTGCTGTTGTCGGTGGCGTCGGTTCCATGTTGACGGCGACCAAGTGGTGGGCCTAT
GTTCTTCTCGCCCCCGTCGTCGTCTCATCCGTCTTTTGCAATCTTTGGTGGAGGAGACGAGTCGGTTATACCCGA
GCCCGAGGTCGCGTCTCAGCCGAAACACTCGAATCCGATCTCGAATACGCCGCCTGGGCAGAAGTTACCCTCCGC
GAGAAACCATCACCATCAACATTAACAACAAAAACATATCTATCCCGCCTCATCGCGTCACCAACTTCCCTCTCC
GACGTCCTTGGTTGGCTTCAACGCCACGACCTCTTTCCAGACATGTGCGTCTTCGCCCTCGCCGACGCCTCCATC
AGAGAAGCCCTCGTCCTTTCAACACCGGATGAGCTCGACGTCGGTATCGCCGAGTTGTTGGCTCTGCCTCCTGCG
CTGCATCCGCGTTTGCTGATAGCAGCCGACGCGTGTGTTGCGCGTATAGGCCGGAAGCATTTTCGTCATCGGGAG
AGATATCTTGCTGAGTTACTTGGCACCTATTGCACTGTCAAGACGAGGGCGGAGGATGAGGAGGTTGGAGAGAAA
Transcript >Ophio5|4839
ATGAGAAAGTCTGGCGTATGTATATCTCGTCCTTCTCTACTCGTAAAGAAGAAGCAGGGTCCCCCCGCCCGCCTC
GGGCCCCATCCGGCCATGACGCTACAGGAGCAGACATGCATCCACGACGACCGCTGCGCCCCCTCGACGACCAGC
GACGACGGGGGGGCTGTGCCGAGCCGAGACACAGCCGTTGTGAAGGAGGAGGATGCCGTTGTTGCCGTGGTCGAT
GATGCCAATAAAGACGAAGACGAAGACGGAGAAGGAGAAGAAGATGACGGAGGCCAAGATGATAAAAGATGTCGC
GTTCGACTTGTCCGGTCTTCCCCTTCCAATTCCTTCCGTCTCGCGCCCGCTTCCCGACTCGAAAACAACCTCCCC
TTTGCCGTCGGTCTTCTCGAGCTCGCAAACGCAGGAGACTTCGCGGCGAACGTATGGAACCAAATCCCCGTCCCC
GTCTACGCCATGGTCTTAATGGCCCTCGGCGGCAGCCTCGCCTTGATCATGAGTCTCGTCGCACTATTCGACGTA
CGACGGGCATGGAGCAACGTACAATTCCTACGACGACAACGACGTCGACTCCGACTCCGCCAACAATCACGACGA
CGACAACAACAACAACAACAACAACAACAACAACAGCGTCTCGACGCCGCGCTCCGAGCCGTATCGTTTCGCGAA
CTGTGGAGCGAAATCATCAACCGACTCGCCATGGATATCCTCATGGGTGCCGGCGCGCTACTCATCGCGGCCGGA
ACATTCATGGCCATGGGCGGCGATGACGAACGCGTCTGGAACGCCAGTAATATCCTATCCGGCTATTTGGGAAAC
ACACCTCTTGCCCTCTTCGCCCTCGTCAACTCGTCCTGGGCGCTATTCCTGGCCGCTACCGCGCAGAGTCATGTT
CGGGCCACGAGACGGAGGGGAATGGCGCCGGCGGCTGAGCTGGTCAAGAGGAGGAGTCGGAATGTGCAGGTTTTT
TGCGTCATCAATGGCACCGCTGCTGTTGTCGGTGGCGTCGGTTCCATGTTGACGGCGACCAAGTGGTGGGCCTAT
GTTCTTCTCGCCCCCGTCGTCGTCTCATCCGTCTTTTGCAATCTTTGGTGGAGGAGACGAGTCGGTTATACCCGA
GCCCGAGGTCGCGTCTCAGCCGAAACACTCGAATCCGATCTCGAATACGCCGCCTGGGCAGAAGTTACCCTCCGC
GAGAAACCATCACCATCAACATTAACAACAAAAACATATCTATCCCGCCTCATCGCGTCACCAACTTCCCTCTCC
GACGTCCTTGGTTGGCTTCAACGCCACGACCTCTTTCCAGACATGTGCGTCTTCGCCCTCGCCGACGCCTCCATC
AGAGAAGCCCTCGTCCTTTCAACACCGGATGAGCTCGACGTCGGTATCGCCGAGTTGTTGGCTCTGCCTCCTGCG
CTGCATCCGCGTTTGCTGATAGCAGCCGACGCGTGTGTTGCGCGTATAGGCCGGAAGCATTTTCGTCATCGGGAG
AGATATCTTGCTGAGTTACTTGGCACCTATTGCACTGTCAAGACGAGGGCGGAGGATGAGGAGGTTGGAGAGAAA
TAG
Gene >Ophio5|4839
ATGAGAAAGTCTGGCGTATGTATATCTCGTCCTTCTCTACTCGTAGTACGTATCTCGCCCATTCTTCTCGTCGTC
ATCTCTGCCAAGAAAATTCAAGACTTGGCGAAAAGAAAAAATAAAATAAAAATCCTTCTTTAATTGGGCCAAAAC
CCTAAACAAAAAGGGCTTCAATATCGATAATCGAGAACCAGCAACTGATTCCGACATAGAAGAAGAAGCAGGGTC
CCCCCGCCCGCCTCGGGCCCCATCCGGCCATGACGCTACAGGAGCAGACATGCATCCACGACGACCGCTGCGCCC
CCTCGACGACCAGCGACGACGGGGGGGCTGTGCCGAGCCGAGACACAGCCGTTGTGAAGGAGGAGGATGCCGTTG
TTGCCGTGGTCGATGATGCCAATAAAGACGAAGACGAAGACGGAGAAGGAGAAGAAGATGACGGAGGCCAAGATG
ATAAAAGATGTCGCGTTCGACTTGTCCGGTCTTCCCCTTCCAATTCCTTCCGTCTCGCGCCCGCTTCCCGACTCG
AAAACAACCTCCCCTTTGCCGTCGGTCTTCTCGAGCTCGCAAACGCAGGAGACTTCGCGGCGAACGTATGGAACC
AAATCCCCGTCCCCGTCTACGCCATGGTCTTAATGGCCCTCGGCGGCAGCCTCGCCTTGATCATGAGTCTCGTCG
CACTATTCGACGTACGACGGGCATGGAGCAACGTACAATTCCTACGACGACAACGACGTCGACTCCGACTCCGCC
AACAATCACGACGACGACAACAACAACAACAACAACAACAACAACAACAGCGTCTCGACGCCGCGCTCCGAGCCG
TATCGTTTCGCGAACTGTGGAGCGAAATCATCAACCGACTCGCCATGGATATCCTCATGGGTGCCGGCGCGCTAC
TCATCGCGGCCGGAACATTCATGGCCATGGGCGGCGATGACGAACGCGTCTGGAACGCCAGTAATATCCTATCCG
GCTATTTGGGAAACACACCTCTTGCCCTCTTCGCCCTCGTCAACTCGTCCTGGGCGCTATTCCTGGCCGCTACCG
CGCAGAGTCATGTTCGGGCCACGAGACGGAGGGGAATGGCGCCGGCGGCTGAGCTGGTCAAGAGGAGGAGTCGGA
ATGTGCAGGTTTTTTGCGTCATCAATGGCACCGCTGCTGTTGTCGGTGGCGTCGGTTCCATGTTGACGGCGACCA
AGTGGTGGGCCTATGTTCTTCTCGCCCCCGTCGTCGTCTCATCCGTCTTTTGCAATCTTTGGTGGAGGAGACGAG
TCGGTTATACCCGAGCCCGAGGTCGCGTCTCAGCCGAAACACTCGAATCCGATCTCGAATACGCCGCCTGGGCAG
AAGTTACCCTCCGCGAGAAACCATCACCATCAACATTAACAACAAAAACATATCTATCCCGCCTCATCGCGTCAC
CAACTTCCCTCTCCGACGTCCTTGGTTGGCTTCAACGCCACGACCTCTTTCCAGACATGTGCGTCTTCGCCCTCG
CCGACGCCTCCATCAGAGAAGCCCTCGTCCTTTCAACACCGGATGAGCTCGACGTCGGTATCGCCGAGTTGTTGG
CTCTGCCTCCTGCGCTGCATCCGCGTTTGCTGATAGCAGCCGACGCGTGTGTTGCGCGTATAGGCCGGAAGCATT
TTCGTCATCGGGAGAGATATCTTGCTGAGTTACTTGGCACCTATTGCACTGTCAAGACGAGGGCGGAGGATGAGG
AGGTTGGAGAGAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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