Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4799
Gene name
Locationscaffold_384:4919..6852
Strand-
Gene length (bp)1933
Transcript length (bp)1821
Coding sequence length (bp)1818
Protein length (aa) 606

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20241 DUF6598 Domain of unknown function (DUF6598) 1.0E-33 362 603

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 59 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 15.45 7.17 23.74
CcL In ants, during behavior modification 38.03 18.69 57.36
CcD In ants, recently dead 19.66 9.59 29.74

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.000286 yes
SC16a CcD 0.372435 no
CcL CcD 0.006982 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4799
MEIAVSIKSCGPTSKMHVRSHLDLPTLSGLRTTLRTSKRWLTLVSWIILSSLPWPMEATTTEPAARFNYSMGAPR
FVYYTQVIQGNHTPAFFQAEGGIRDLYGRDSITVSEDVEATLRIVSNGGHWNYWIFRISATPTMLPHDNEASASM
GYVAHEALVGVFWSSVHAYAALENGVWQDQAAGDIEWQFNPDYDARWQMFGPNAGQAERDVPKDEYHEDIFLEEM
TSSRHSMLDARRLAILRELTGWQPDHEREPESLMQRQIADPPSLLSSAWSAVWRLDWSKMGLSFNSRQILAGGIP
TAVQCAAVLRIYMQHRRPKYQKKREVAARPEGSPKGRECDDLAAAVQEDQQHQVIIQGRPIVQIHGVEIRNIDGE
NLGDLYGFITATDTLGTQDLYRVQRADAQSIRPHGPVALTGPSRPIEATDGFTIEMNLWDRDGDLSPDDQVSLGR
LVWTVSQPPAPLDQSSAVSFKGRYGEAVLYLKVVSKAAAAEVEVVMINGDNEWPANVYGSVRLTSASVTETIFNR
HGRNYVDVYPGNNIPLAQKFVVIKLDEAVEVVVDLWDHDSDWSPNDQIAKGAVKFQPKLMGDEKQRVRGTYGQVE
VRITWL
Coding >Ophio5|4799
ATGGAAATCGCAGTCAGTATAAAGAGTTGCGGACCAACCTCCAAGATGCATGTTCGGAGCCATCTTGACTTGCCT
ACCCTCTCCGGCCTACGCACTACCCTGAGGACCTCCAAGCGTTGGCTCACTTTGGTCTCATGGATCATACTATCG
TCGCTCCCATGGCCGATGGAGGCGACGACGACGGAGCCAGCAGCGCGTTTCAATTATTCAATGGGAGCTCCTCGG
TTTGTGTATTACACGCAGGTGATTCAAGGTAATCATACTCCAGCTTTCTTCCAGGCTGAGGGCGGCATTCGGGAC
CTCTACGGAAGAGACTCCATCACCGTGTCCGAGGACGTTGAAGCGACGTTGCGCATTGTTAGTAACGGCGGCCAC
TGGAACTATTGGATTTTCCGAATCTCGGCTACGCCCACCATGCTTCCCCATGATAATGAGGCATCGGCGAGCATG
GGTTATGTTGCGCATGAGGCCTTGGTGGGCGTGTTCTGGTCATCGGTGCATGCCTATGCTGCCTTGGAGAATGGC
GTGTGGCAGGACCAAGCAGCTGGCGACATCGAATGGCAGTTTAACCCAGACTACGATGCTCGATGGCAGATGTTC
GGCCCCAACGCAGGGCAGGCCGAGAGAGATGTCCCCAAAGACGAATATCACGAAGACATCTTTCTGGAGGAGATG
ACGAGCTCCCGGCACTCGATGCTCGATGCCCGTCGGCTCGCAATTCTCCGCGAGCTGACTGGCTGGCAGCCGGAT
CACGAGCGAGAGCCCGAGAGCCTCATGCAGCGACAAATTGCGGATCCCCCGTCTCTCTTGTCTTCAGCATGGTCA
GCCGTGTGGCGGCTCGACTGGTCCAAGATGGGCTTGTCCTTCAATTCGCGGCAAATACTAGCCGGCGGGATTCCG
ACGGCCGTCCAGTGCGCCGCTGTACTGCGAATATATATGCAGCATCGGCGGCCCAAGTATCAAAAGAAGAGAGAG
GTTGCCGCCAGGCCAGAGGGGAGCCCAAAGGGAAGGGAGTGCGATGATCTAGCTGCCGCGGTCCAGGAGGACCAG
CAGCACCAGGTCATCATTCAAGGCCGTCCGATAGTGCAGATCCATGGCGTCGAAATCCGTAACATTGACGGCGAG
AATCTCGGCGATCTCTATGGCTTCATCACCGCTACCGACACGCTGGGCACCCAAGACCTCTACCGAGTCCAGAGA
GCCGACGCGCAATCCATACGGCCGCACGGCCCCGTGGCGCTGACGGGCCCCTCGCGGCCCATCGAGGCGACCGAC
GGTTTTACCATCGAGATGAATCTCTGGGACCGAGACGGAGATCTATCGCCCGACGACCAGGTCAGCTTAGGGCGT
CTGGTGTGGACAGTTTCGCAGCCGCCCGCGCCGCTCGATCAGTCCTCGGCCGTCTCCTTCAAGGGCCGCTATGGC
GAGGCCGTCTTGTATCTCAAGGTCGTCAGCAAGGCCGCGGCCGCCGAGGTCGAAGTAGTCATGATCAATGGCGAC
AACGAGTGGCCGGCCAACGTCTATGGCAGCGTCCGGCTCACGTCTGCCTCGGTGACCGAGACCATCTTCAACCGC
CACGGTCGAAACTACGTCGATGTATACCCCGGAAACAATATTCCCCTGGCGCAGAAGTTTGTCGTCATCAAGCTG
GACGAGGCAGTTGAGGTCGTGGTGGACCTCTGGGACCACGATAGTGATTGGTCACCCAACGATCAGATTGCTAAG
GGGGCGGTCAAGTTTCAGCCGAAGCTGATGGGTGACGAGAAGCAGAGGGTGAGAGGAACCTATGGCCAAGTGGAA
GTCAGGATTACATGGCTG
Transcript >Ophio5|4799
ATGGAAATCGCAGTCAGTATAAAGAGTTGCGGACCAACCTCCAAGATGCATGTTCGGAGCCATCTTGACTTGCCT
ACCCTCTCCGGCCTACGCACTACCCTGAGGACCTCCAAGCGTTGGCTCACTTTGGTCTCATGGATCATACTATCG
TCGCTCCCATGGCCGATGGAGGCGACGACGACGGAGCCAGCAGCGCGTTTCAATTATTCAATGGGAGCTCCTCGG
TTTGTGTATTACACGCAGGTGATTCAAGGTAATCATACTCCAGCTTTCTTCCAGGCTGAGGGCGGCATTCGGGAC
CTCTACGGAAGAGACTCCATCACCGTGTCCGAGGACGTTGAAGCGACGTTGCGCATTGTTAGTAACGGCGGCCAC
TGGAACTATTGGATTTTCCGAATCTCGGCTACGCCCACCATGCTTCCCCATGATAATGAGGCATCGGCGAGCATG
GGTTATGTTGCGCATGAGGCCTTGGTGGGCGTGTTCTGGTCATCGGTGCATGCCTATGCTGCCTTGGAGAATGGC
GTGTGGCAGGACCAAGCAGCTGGCGACATCGAATGGCAGTTTAACCCAGACTACGATGCTCGATGGCAGATGTTC
GGCCCCAACGCAGGGCAGGCCGAGAGAGATGTCCCCAAAGACGAATATCACGAAGACATCTTTCTGGAGGAGATG
ACGAGCTCCCGGCACTCGATGCTCGATGCCCGTCGGCTCGCAATTCTCCGCGAGCTGACTGGCTGGCAGCCGGAT
CACGAGCGAGAGCCCGAGAGCCTCATGCAGCGACAAATTGCGGATCCCCCGTCTCTCTTGTCTTCAGCATGGTCA
GCCGTGTGGCGGCTCGACTGGTCCAAGATGGGCTTGTCCTTCAATTCGCGGCAAATACTAGCCGGCGGGATTCCG
ACGGCCGTCCAGTGCGCCGCTGTACTGCGAATATATATGCAGCATCGGCGGCCCAAGTATCAAAAGAAGAGAGAG
GTTGCCGCCAGGCCAGAGGGGAGCCCAAAGGGAAGGGAGTGCGATGATCTAGCTGCCGCGGTCCAGGAGGACCAG
CAGCACCAGGTCATCATTCAAGGCCGTCCGATAGTGCAGATCCATGGCGTCGAAATCCGTAACATTGACGGCGAG
AATCTCGGCGATCTCTATGGCTTCATCACCGCTACCGACACGCTGGGCACCCAAGACCTCTACCGAGTCCAGAGA
GCCGACGCGCAATCCATACGGCCGCACGGCCCCGTGGCGCTGACGGGCCCCTCGCGGCCCATCGAGGCGACCGAC
GGTTTTACCATCGAGATGAATCTCTGGGACCGAGACGGAGATCTATCGCCCGACGACCAGGTCAGCTTAGGGCGT
CTGGTGTGGACAGTTTCGCAGCCGCCCGCGCCGCTCGATCAGTCCTCGGCCGTCTCCTTCAAGGGCCGCTATGGC
GAGGCCGTCTTGTATCTCAAGGTCGTCAGCAAGGCCGCGGCCGCCGAGGTCGAAGTAGTCATGATCAATGGCGAC
AACGAGTGGCCGGCCAACGTCTATGGCAGCGTCCGGCTCACGTCTGCCTCGGTGACCGAGACCATCTTCAACCGC
CACGGTCGAAACTACGTCGATGTATACCCCGGAAACAATATTCCCCTGGCGCAGAAGTTTGTCGTCATCAAGCTG
GACGAGGCAGTTGAGGTCGTGGTGGACCTCTGGGACCACGATAGTGATTGGTCACCCAACGATCAGATTGCTAAG
GGGGCGGTCAAGTTTCAGCCGAAGCTGATGGGTGACGAGAAGCAGAGGGTGAGAGGAACCTATGGCCAAGTGGAA
GTCAGGATTACATGGCTGTAA
Gene >Ophio5|4799
ATGGAAATCGCAGGTATGTCATTTCCCTATCTTGAGACTGTTTGTTCGTCCTAACCCCCTTCCTTCCTTTATCAG
TCAGTATAAAGAGTTGCGGACCAACCTCCAAGATGCATGTTCGGAGCCATCTTGACTTGCCTACCCTCTCCGGCC
TACGCACTACCCTGAGGACCTCCAAGCGTTGGCTCACTTTGGTCTCATGGATCATACTATCGTCGCTCCCATGGC
CGATGGAGGCGACGACGACGGAGCCAGCAGCGCGTTTCAATTATTCAATGGGAGCTCCTCGGTTTGTGTATTACA
CGCAGGTGATTCAAGGTAATCATACTCCAGCTTTCTTCCAGGCTGAGGGCGGCATTCGGGACCTCTACGGAAGAG
ACTCCATCACCGTGTCCGAGGACGTTGAAGCGACGTTGCGCATTGTTAGTAACGGCGGCCACTGGAACTATTGGA
TTTTCCGAATCTCGGCTACGCCCACCATGCTTCCCCATGATAATGAGGCATCGGCGAGCATGGGTTATGTTGCGC
ATGAGGCCTTGGTGGGCGTGTTCTGGTCATCGGTGCATGCCTATGCTGCCTTGGAGAATGGCGTGTGGCAGGACC
AAGCAGCTGGCGACATCGAATGGCAGTTTAACCCAGACTACGATGCTCGATGGCAGATGTTCGGCCCCAACGCAG
GGCAGGCCGAGAGAGATGTCCCCAAAGACGAATATCACGAAGACATCTTTCTGGAGGAGATGACGAGCTCCCGGC
ACTCGATGCTCGATGCCCGTCGGCTCGCAATTCTCCGCGAGCTGACTGGCTGGCAGCCGGATCACGAGCGAGAGC
CCGAGAGCCTCATGCAGCGACAAAGTACGACAAGAAAGGGCCGCTTCCGGTGACTCATCCTTATGAGCTGACAGT
TGCGGATCCCCCGTCTCTCTTGTCTTCAGCATGGTCAGCCGTGTGGCGGCTCGACTGGTCCAAGATGGGCTTGTC
CTTCAATTCGCGGCAAATACTAGCCGGCGGGATTCCGACGGCCGTCCAGTGCGCCGCTGTACTGCGAATATATAT
GCAGCATCGGCGGCCCAAGTATCAAAAGAAGAGAGAGGTTGCCGCCAGGCCAGAGGGGAGCCCAAAGGGAAGGGA
GTGCGATGATCTAGCTGCCGCGGTCCAGGAGGACCAGCAGCACCAGGTCATCATTCAAGGCCGTCCGATAGTGCA
GATCCATGGCGTCGAAATCCGTAACATTGACGGCGAGAATCTCGGCGATCTCTATGGCTTCATCACCGCTACCGA
CACGCTGGGCACCCAAGACCTCTACCGAGTCCAGAGAGCCGACGCGCAATCCATACGGCCGCACGGCCCCGTGGC
GCTGACGGGCCCCTCGCGGCCCATCGAGGCGACCGACGGTTTTACCATCGAGATGAATCTCTGGGACCGAGACGG
AGATCTATCGCCCGACGACCAGGTCAGCTTAGGGCGTCTGGTGTGGACAGTTTCGCAGCCGCCCGCGCCGCTCGA
TCAGTCCTCGGCCGTCTCCTTCAAGGGCCGCTATGGCGAGGCCGTCTTGTATCTCAAGGTCGTCAGCAAGGCCGC
GGCCGCCGAGGTCGAAGTAGTCATGATCAATGGCGACAACGAGTGGCCGGCCAACGTCTATGGCAGCGTCCGGCT
CACGTCTGCCTCGGTGACCGAGACCATCTTCAACCGCCACGGTCGAAACTACGTCGATGTATACCCCGGAAACAA
TATTCCCCTGGCGCAGAAGTTTGTCGTCATCAAGCTGGACGAGGCAGTTGAGGTCGTGGTGGACCTCTGGGACCA
CGATAGTGATTGGTCACCCAACGATCAGATTGCTAAGGGGGCGGTCAAGTTTCAGCCGAAGCTGATGGGTGACGA
GAAGCAGAGGGTGAGAGGAACCTATGGCCAAGTGGAAGTCAGGATTACATGGCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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