© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|4798 |
| Gene name | |
| Location | scaffold_384:3001..4646 |
| Strand | - |
| Gene length (bp) | 1645 |
| Transcript length (bp) | 1491 |
| Coding sequence length (bp) | 1488 |
| Protein length (aa) | 496 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF14630 | ORC5_C | Origin recognition complex (ORC) subunit 5 C-terminus | 3.5E-79 | 205 | 494 |
| PF13191 | AAA_16 | AAA ATPase domain | 2.0E-19 | 20 | 182 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9WUV0|ORC5_MOUSE | Origin recognition complex subunit 5 OS=Mus musculus GN=Orc5 PE=2 SV=1 | 23 | 496 | 2.0E-27 |
| sp|O43114|ORC5_SCHPO | Origin recognition complex subunit 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=orc5 PE=1 SV=2 | 23 | 494 | 1.0E-26 |
| sp|O43913|ORC5_HUMAN | Origin recognition complex subunit 5 OS=Homo sapiens GN=ORC5 PE=1 SV=1 | 23 | 496 | 3.0E-22 |
| sp|Q24169|ORC5_DROME | Origin recognition complex subunit 5 OS=Drosophila melanogaster GN=Orc5 PE=1 SV=1 | 10 | 496 | 9.0E-22 |
| sp|P50874|ORC5_YEAST | Origin recognition complex subunit 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ORC5 PE=1 SV=1 | 23 | 494 | 5.0E-16 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005634 | nucleus | Yes |
| GO:0000808 | origin recognition complex | Yes |
| GO:0006260 | DNA replication | Yes |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0032991 | protein-containing complex | No |
| GO:0006259 | DNA metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0043226 | organelle | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0009987 | cellular process | No |
| GO:0043231 | intracellular membrane-bounded organelle | No |
| GO:0043229 | intracellular organelle | No |
| GO:0005575 | cellular_component | No |
| GO:0043227 | membrane-bounded organelle | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.2506 | 0.5664 | 0.1161 | 0.1758 | 0.1449 | 0.0008 | 0.1466 | 0.0864 | 0.1257 | 0.0035 |
| Orthofinder run ID | 4 |
| Orthogroup | 5345 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|4798 MASAFRLPDERILSAVLQSFPGREQQIRALASLVHPDAAPCRNLVIYGAEASGKSAITEQLLARLADEDDEGLAY AIVRAGQCITGRHLFESIVGAVAAALRRDIEDEADDDYGDVEEEEDGRRCETLAQLAVSLTTMLGAAAKHRARWR FVLVLDAIDRQRDAPPTLLPALARLPEMLPCLGCIFIVTSPPAGLVQTQATAHLHFPPYTKPEFVRILSLKPPAP IAGTTADETAGLWMRFCAAVHDALVRPASRTLPSFRRSCLALWPRFVAPVVAGARSVKDFSKLLVAARPHFLDES LLNPSLISYRSGAASEPATVEEENNSKSLASTARPRSALASADILGLLPFAARLLLLCAYLASHNAPRHDLSLFS TFHHGRKRRRGASSRGMPRAKHRKIARKLLGAHAFVLERMLAILEAVRGEWAPDGCSIGSAGLDGDVGTALATLA SLRLLVRVGSGDVADRAGKWRINASWEAVRGIGRSIGVELEDWLIE |
| Coding | >Ophio5|4798 ATGGCTTCGGCCTTCCGACTCCCCGACGAAAGGATCCTTTCAGCCGTGCTGCAGAGCTTTCCGGGTCGGGAGCAG CAGATACGCGCGCTGGCCTCTCTCGTCCACCCCGACGCGGCGCCGTGTCGCAATCTAGTCATCTACGGCGCTGAA GCATCGGGCAAGTCGGCCATAACGGAGCAGCTACTGGCGCGTCTAGCAGACGAAGACGACGAGGGTCTCGCGTAC GCCATCGTTAGGGCTGGCCAGTGCATCACCGGACGCCATCTGTTTGAGTCTATTGTCGGAGCAGTGGCTGCGGCG CTGCGGCGCGACATCGAGGATGAGGCCGACGATGATTATGGTGATGTGGAGGAGGAGGAGGATGGCCGGCGATGC GAGACGCTGGCGCAACTCGCCGTTTCGCTGACGACGATGCTCGGGGCCGCGGCCAAGCATCGGGCGCGCTGGCGA TTCGTCTTGGTGCTGGATGCCATCGACAGGCAGAGGGACGCGCCGCCGACTTTACTGCCGGCGCTGGCTCGCCTT CCCGAGATGCTTCCCTGCCTTGGATGCATATTCATCGTCACGTCGCCGCCGGCCGGCCTCGTACAGACGCAAGCC ACGGCGCATCTACACTTTCCTCCCTACACGAAGCCTGAGTTCGTGCGAATTCTGTCATTGAAGCCGCCGGCGCCG ATCGCCGGTACGACGGCCGACGAGACGGCCGGACTATGGATGCGCTTCTGTGCTGCCGTCCACGATGCCCTCGTC CGGCCTGCGTCGCGCACGCTCCCCTCGTTTCGACGCAGTTGTCTCGCTCTCTGGCCGCGCTTCGTCGCTCCCGTC GTTGCCGGCGCTCGTTCGGTCAAAGACTTTTCCAAGCTGCTCGTCGCCGCTCGACCTCATTTTCTGGACGAGTCG CTACTGAATCCGAGCCTCATTTCATACCGGTCCGGTGCGGCGTCGGAGCCGGCGACCGTCGAAGAAGAGAATAAC AGCAAAAGCCTCGCCAGCACAGCCCGCCCTCGGTCGGCTCTGGCCTCGGCCGACATTCTCGGCCTTCTCCCCTTC GCTGCTCGGCTTCTCCTCCTGTGCGCCTATCTCGCGTCCCACAACGCCCCGCGTCACGATCTATCCCTCTTCTCG ACCTTCCATCACGGCCGCAAGCGTCGTCGCGGCGCCTCGTCGCGGGGCATGCCGCGGGCCAAGCATCGCAAGATC GCCCGCAAGCTCCTCGGCGCCCATGCTTTCGTCCTCGAGCGCATGCTGGCCATCTTGGAGGCTGTTCGTGGAGAG TGGGCGCCTGACGGCTGCTCTATCGGCTCCGCGGGGCTCGACGGCGACGTGGGCACGGCCCTGGCGACGCTGGCT AGCCTGAGGCTCCTTGTTCGCGTTGGCTCTGGCGATGTCGCCGACAGGGCGGGCAAGTGGAGGATCAATGCGAGC TGGGAAGCTGTCCGGGGCATTGGCAGGAGCATAGGCGTCGAGTTGGAGGACTGGCTCATCGAG |
| Transcript | >Ophio5|4798 ATGGCTTCGGCCTTCCGACTCCCCGACGAAAGGATCCTTTCAGCCGTGCTGCAGAGCTTTCCGGGTCGGGAGCAG CAGATACGCGCGCTGGCCTCTCTCGTCCACCCCGACGCGGCGCCGTGTCGCAATCTAGTCATCTACGGCGCTGAA GCATCGGGCAAGTCGGCCATAACGGAGCAGCTACTGGCGCGTCTAGCAGACGAAGACGACGAGGGTCTCGCGTAC GCCATCGTTAGGGCTGGCCAGTGCATCACCGGACGCCATCTGTTTGAGTCTATTGTCGGAGCAGTGGCTGCGGCG CTGCGGCGCGACATCGAGGATGAGGCCGACGATGATTATGGTGATGTGGAGGAGGAGGAGGATGGCCGGCGATGC GAGACGCTGGCGCAACTCGCCGTTTCGCTGACGACGATGCTCGGGGCCGCGGCCAAGCATCGGGCGCGCTGGCGA TTCGTCTTGGTGCTGGATGCCATCGACAGGCAGAGGGACGCGCCGCCGACTTTACTGCCGGCGCTGGCTCGCCTT CCCGAGATGCTTCCCTGCCTTGGATGCATATTCATCGTCACGTCGCCGCCGGCCGGCCTCGTACAGACGCAAGCC ACGGCGCATCTACACTTTCCTCCCTACACGAAGCCTGAGTTCGTGCGAATTCTGTCATTGAAGCCGCCGGCGCCG ATCGCCGGTACGACGGCCGACGAGACGGCCGGACTATGGATGCGCTTCTGTGCTGCCGTCCACGATGCCCTCGTC CGGCCTGCGTCGCGCACGCTCCCCTCGTTTCGACGCAGTTGTCTCGCTCTCTGGCCGCGCTTCGTCGCTCCCGTC GTTGCCGGCGCTCGTTCGGTCAAAGACTTTTCCAAGCTGCTCGTCGCCGCTCGACCTCATTTTCTGGACGAGTCG CTACTGAATCCGAGCCTCATTTCATACCGGTCCGGTGCGGCGTCGGAGCCGGCGACCGTCGAAGAAGAGAATAAC AGCAAAAGCCTCGCCAGCACAGCCCGCCCTCGGTCGGCTCTGGCCTCGGCCGACATTCTCGGCCTTCTCCCCTTC GCTGCTCGGCTTCTCCTCCTGTGCGCCTATCTCGCGTCCCACAACGCCCCGCGTCACGATCTATCCCTCTTCTCG ACCTTCCATCACGGCCGCAAGCGTCGTCGCGGCGCCTCGTCGCGGGGCATGCCGCGGGCCAAGCATCGCAAGATC GCCCGCAAGCTCCTCGGCGCCCATGCTTTCGTCCTCGAGCGCATGCTGGCCATCTTGGAGGCTGTTCGTGGAGAG TGGGCGCCTGACGGCTGCTCTATCGGCTCCGCGGGGCTCGACGGCGACGTGGGCACGGCCCTGGCGACGCTGGCT AGCCTGAGGCTCCTTGTTCGCGTTGGCTCTGGCGATGTCGCCGACAGGGCGGGCAAGTGGAGGATCAATGCGAGC TGGGAAGCTGTCCGGGGCATTGGCAGGAGCATAGGCGTCGAGTTGGAGGACTGGCTCATCGAGTGA |
| Gene | >Ophio5|4798 ATGGCTTCGGCCTTCCGACTCCCCGACGAAAGGATCCTTTCAGCCGTGCTGCAGAGCTTTCCGGGTCGGGAGCAG CAGATACGCGCGCTGGCCTCTCTCGTCCACGTATGCGTGTCGATACTGTCCAGGCGAGGGTGCCGAGTGCTAACG GGGCCGTCCAAGCCCGACGCGGCGCCGTGTCGCAATCTAGTCATCTACGGCGCTGAAGCATCGGGCAAGTCGGCC ATAACGGAGCAGCTACTGGCGCGTCTAGCAGACGAAGACGACGAGGGTCTCGCGTACGCCATCGTTAGGGCTGGC CAGTGCATCACCGGACGCCATCTGTTTGAGTCTATTGTCGGAGCAGTGGCTGCGGCGCTGCGGCGCGACATCGAG GATGAGGCCGACGATGATTATGGTGATGTGGAGGAGGAGGAGGATGGCCGGCGATGCGAGACGCTGGCGCAACTC GCCGTTTCGCTGACGACGATGCTCGGGGCCGCGGCCAAGCATCGGGCGCGCTGGCGATTCGTCTTGGTGCTGGAT GCCATCGACAGGCAGAGGGACGCGCCGCCGACTTTACTGCCGGCGCTGGCTCGCCTTCCCGAGATGGTGGGCATC TCTGTCCTCTCCCTCCATCTCCTCCTCTCTCTCTACCTACACCGTCTCTGCATCTCTGAGCTGACAGGGGTGAAA AAAAAAACTCTAGCTTCCCTGCCTTGGATGCATATTCATCGTCACGTCGCCGCCGGCCGGCCTCGTACAGACGCA AGCCACGGCGCATCTACACTTTCCTCCCTACACGAAGCCTGAGTTCGTGCGAATTCTGTCATTGAAGCCGCCGGC GCCGATCGCCGGTACGACGGCCGACGAGACGGCCGGACTATGGATGCGCTTCTGTGCTGCCGTCCACGATGCCCT CGTCCGGCCTGCGTCGCGCACGCTCCCCTCGTTTCGACGCAGTTGTCTCGCTCTCTGGCCGCGCTTCGTCGCTCC CGTCGTTGCCGGCGCTCGTTCGGTCAAAGACTTTTCCAAGCTGCTCGTCGCCGCTCGACCTCATTTTCTGGACGA GTCGCTACTGAATCCGAGCCTCATTTCATACCGGTCCGGTGCGGCGTCGGAGCCGGCGACCGTCGAAGAAGAGAA TAACAGCAAAAGCCTCGCCAGCACAGCCCGCCCTCGGTCGGCTCTGGCCTCGGCCGACATTCTCGGCCTTCTCCC CTTCGCTGCTCGGCTTCTCCTCCTGTGCGCCTATCTCGCGTCCCACAACGCCCCGCGTCACGATCTATCCCTCTT CTCGACCTTCCATCACGGCCGCAAGCGTCGTCGCGGCGCCTCGTCGCGGGGCATGCCGCGGGCCAAGCATCGCAA GATCGCCCGCAAGCTCCTCGGCGCCCATGCTTTCGTCCTCGAGCGCATGCTGGCCATCTTGGAGGCTGTTCGTGG AGAGTGGGCGCCTGACGGCTGCTCTATCGGCTCCGCGGGGCTCGACGGCGACGTGGGCACGGCCCTGGCGACGCT GGCTAGCCTGAGGCTCCTTGTTCGCGTTGGCTCTGGCGATGTCGCCGACAGGGCGGGCAAGTGGAGGATCAATGC GAGCTGGGAAGCTGTCCGGGGCATTGGCAGGAGCATAGGCGTCGAGTTGGAGGACTGGCTCATCGAGTGA |