Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|4790
Gene name
Location	scaffold_382:19287..19953
Strand	-
Gene length (bp)	666
Transcript length (bp)	585
Coding sequence length (bp)	582
Protein length (aa)	194

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF07452	CHRD	CHRD domain	3.2E-12	62	183

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 17	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|4790 MKTVLFGLVATGVAAAAAPEPMMTDCMLKDAGSPFKFTSTFHVDAGPGEVVDAMNNFTGGLQGATGHFHFGINSD QNFICYNISVDGFRGNYSSPAKTATHIHEGAVGKSGPPRIVFPNPEGPEGQHRVTMGCIQGPFVTGVMTNGTDSG RGFHVRQIEENPDGFFADLHSTEAVPGAVRGQLQKQEVCTVTWM
Coding	>Ophio5\|4790 ATGAAGACAGTTCTGTTCGGTCTCGTCGCTACTGGTGTTGCTGCTGCGGCGGCGCCGGAGCCGATGATGACCGAC TGCATGCTGAAAGACGCCGGGTCGCCCTTCAAGTTCACCTCGACCTTCCACGTTGACGCTGGACCGGGCGAGGTT GTCGACGCTATGAATAACTTTACCGGTGGGCTGCAGGGTGCCACGGGCCATTTTCACTTTGGCATCAACTCGGAT CAGAACTTCATCTGCTATAACATCAGTGTCGACGGCTTCCGGGGCAACTACTCGTCTCCGGCCAAGACGGCTACG CACATCCACGAGGGCGCCGTTGGGAAATCGGGTCCTCCTCGAATCGTCTTCCCTAACCCTGAAGGTCCCGAGGGC CAGCATCGGGTCACCATGGGCTGTATCCAAGGACCCTTCGTCACGGGCGTCATGACCAACGGAACCGATTCCGGA CGGGGCTTCCACGTCAGGCAGATCGAGGAGAACCCGGATGGGTTTTTCGCCGATTTGCATTCGACCGAGGCTGTT CCCGGTGCGGTTCGTGGTCAGCTTCAGAAGCAGGAGGTTTGCACTGTTACCTGGATG
Transcript	>Ophio5\|4790 ATGAAGACAGTTCTGTTCGGTCTCGTCGCTACTGGTGTTGCTGCTGCGGCGGCGCCGGAGCCGATGATGACCGAC TGCATGCTGAAAGACGCCGGGTCGCCCTTCAAGTTCACCTCGACCTTCCACGTTGACGCTGGACCGGGCGAGGTT GTCGACGCTATGAATAACTTTACCGGTGGGCTGCAGGGTGCCACGGGCCATTTTCACTTTGGCATCAACTCGGAT CAGAACTTCATCTGCTATAACATCAGTGTCGACGGCTTCCGGGGCAACTACTCGTCTCCGGCCAAGACGGCTACG CACATCCACGAGGGCGCCGTTGGGAAATCGGGTCCTCCTCGAATCGTCTTCCCTAACCCTGAAGGTCCCGAGGGC CAGCATCGGGTCACCATGGGCTGTATCCAAGGACCCTTCGTCACGGGCGTCATGACCAACGGAACCGATTCCGGA CGGGGCTTCCACGTCAGGCAGATCGAGGAGAACCCGGATGGGTTTTTCGCCGATTTGCATTCGACCGAGGCTGTT CCCGGTGCGGTTCGTGGTCAGCTTCAGAAGCAGGAGGTTTGCACTGTTACCTGGATGTAA
Gene	>Ophio5\|4790 ATGAAGACAGTTCTGTTCGGTCTCGTCGCTACTGGTGTTGCTGCTGCGGCGGCGCCGGAGCCGATGATGACCGAC TGCATGCTGAAAGACGCCGGGTCGCCCTTCAAGTTCACCTCGACCTTCCACGTTGACGCTGGACCGGGCGAGGTT GTCGACGCTATGAATAACTTTACCGGTGGGCTGCAGGGTGCCACGGGCCATTTTCACTTTGGCATCAACTCGGAT CAGAACTTCATCTGCTATAACATCAGTGTCGACGGCTTCCGGGGCAACTACTCGTCTCCGGCCAAGACGGCTACG CACATCCACGAGGGCGCCGTTGGGAAATCGGGTCCTCCTCGGTACGTGACAACATTCTTCCCCCCCAAGATGTGA TCATCCTGTTTGTTTCTAATCATGAAAAAAAAAAACGCATCATGTAGAATCGTCTTCCCTAACCCTGAAGGTCCC GAGGGCCAGCATCGGGTCACCATGGGCTGTATCCAAGGACCCTTCGTCACGGGCGTCATGACCAACGGAACCGAT TCCGGACGGGGCTTCCACGTCAGGCAGATCGAGGAGAACCCGGATGGGTTTTTCGCCGATTTGCATTCGACCGAG GCTGTTCCCGGTGCGGTTCGTGGTCAGCTTCAGAAGCAGGAGGTTTGCACTGTTACCTGGATGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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