Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4789
Gene name
Locationscaffold_382:17683..18524
Strand+
Gene length (bp)841
Transcript length (bp)786
Coding sequence length (bp)783
Protein length (aa) 261

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01184 Gpr1_Fun34_YaaH GPR1/FUN34/yaaH family 1.2E-54 45 248

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P32907|ATO2_YEAST Ammonia transport outward protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATO2 PE=1 SV=1 45 241 6.0E-31
sp|P25613|ADY2_YEAST Accumulation of dyads protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADY2 PE=1 SV=1 45 245 3.0E-30
sp|O14201|MUG86_SCHPO Meiotically up-regulated gene 86 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug86 PE=1 SV=1 42 260 2.0E-27
sp|P41943|GPR1_YARLI Glyoxylate pathway regulator OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=GPR1 PE=1 SV=3 5 241 5.0E-23
sp|Q5B2K4|ACPA_EMENI Acetate permease A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=acpA PE=2 SV=1 45 256 3.0E-22
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Swissprot ID Swissprot Description Start End E-value
sp|P32907|ATO2_YEAST Ammonia transport outward protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATO2 PE=1 SV=1 45 241 6.0E-31
sp|P25613|ADY2_YEAST Accumulation of dyads protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADY2 PE=1 SV=1 45 245 3.0E-30
sp|O14201|MUG86_SCHPO Meiotically up-regulated gene 86 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug86 PE=1 SV=1 42 260 2.0E-27
sp|P41943|GPR1_YARLI Glyoxylate pathway regulator OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=GPR1 PE=1 SV=3 5 241 5.0E-23
sp|Q5B2K4|ACPA_EMENI Acetate permease A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=acpA PE=2 SV=1 45 256 3.0E-22
sp|P0ACA0|SATP_SHIFL Succinate-acetate/proton symporter SatP OS=Shigella flexneri GN=satP PE=3 SV=1 45 247 6.0E-20
sp|P0AC98|SATP_ECOLI Succinate-acetate/proton symporter SatP OS=Escherichia coli (strain K12) GN=satP PE=1 SV=1 45 247 6.0E-20
sp|P0AC99|SATP_ECO57 Succinate-acetate/proton symporter SatP OS=Escherichia coli O157:H7 GN=satP PE=3 SV=1 45 247 6.0E-20
sp|O26317|Y215_METTH Uncharacterized protein MTH_215 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_215 PE=3 SV=1 45 236 4.0E-18
sp|Q12359|ATO3_YEAST Ammonia transport outward protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATO3 PE=1 SV=1 12 243 1.0E-13
sp|Q24JP1|ALCS_ASPFU Protein alcS OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=alcS PE=3 SV=1 1 256 2.0E-13
sp|B0YBR5|ALCS_ASPFC Protein alcS OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=alcS PE=3 SV=2 1 256 2.0E-13
sp|Q460G9|ALCS_EMENI Protein alcS OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=alcS PE=2 SV=1 45 177 6.0E-08
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.5

Transmembrane Domains

Domain # Start End Length
1 52 74 22
2 87 105 18
3 115 137 22
4 150 172 22
5 177 199 22
6 212 234 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4789
MASSTGAPSHAGENAYMEANELGYSSARKTHQGTVSQVGDPQFFRLANPGPLGLISFALTTFCLSIYLCGAGLPD
GNPLGTVGPDQAIFGLAVFFGGAAQFMAGIMEFRVGNTFGTTVHCSYGAFWLAFAMLRVPSLGIQEAYRGDERAL
SFAIGIMLILWCFLTLIFVVAALRTNLAILLVLGFLALTFFFLSIGQFVSTSHPIAARRVTRAGGVFGALCALGA
FYAGSSALMTEDTTWVRFPLGQFSYKSRRRAVADTV
Coding >Ophio5|4789
ATGGCCTCATCGACCGGAGCACCGTCCCACGCTGGCGAGAACGCATACATGGAAGCCAACGAACTAGGCTACAGC
TCAGCTCGCAAGACGCACCAAGGGACCGTCTCACAAGTCGGCGACCCCCAGTTCTTCCGTCTGGCCAATCCAGGC
CCGCTGGGTCTCATCAGCTTCGCCCTGACGACCTTTTGTCTGAGCATCTACCTCTGCGGTGCTGGCCTTCCCGAT
GGCAACCCGCTCGGAACTGTCGGTCCAGACCAAGCCATCTTCGGTCTGGCCGTCTTCTTCGGCGGCGCGGCGCAG
TTCATGGCTGGCATCATGGAGTTCAGAGTCGGAAACACGTTTGGTACTACCGTTCACTGCTCGTACGGTGCCTTT
TGGCTTGCTTTTGCCATGCTACGCGTGCCTTCGCTCGGCATTCAAGAGGCTTACCGCGGCGACGAGCGGGCTTTG
AGCTTCGCCATTGGTATCATGCTTATTCTTTGGTGCTTTCTCACACTAATCTTTGTCGTCGCCGCTCTTCGTACC
AACCTGGCTATTCTCCTCGTTCTCGGCTTTCTCGCCCTCACCTTTTTCTTTCTGAGCATCGGCCAGTTCGTCTCT
ACCAGTCACCCCATCGCTGCTCGACGCGTCACCCGTGCCGGTGGCGTCTTCGGCGCTCTCTGTGCCCTGGGCGCC
TTTTACGCCGGCAGCTCGGCCCTCATGACCGAGGACACGACCTGGGTTCGCTTCCCGCTCGGCCAGTTCTCCTAC
AAGTCGCGGAGACGGGCCGTCGCCGATACCGTC
Transcript >Ophio5|4789
ATGGCCTCATCGACCGGAGCACCGTCCCACGCTGGCGAGAACGCATACATGGAAGCCAACGAACTAGGCTACAGC
TCAGCTCGCAAGACGCACCAAGGGACCGTCTCACAAGTCGGCGACCCCCAGTTCTTCCGTCTGGCCAATCCAGGC
CCGCTGGGTCTCATCAGCTTCGCCCTGACGACCTTTTGTCTGAGCATCTACCTCTGCGGTGCTGGCCTTCCCGAT
GGCAACCCGCTCGGAACTGTCGGTCCAGACCAAGCCATCTTCGGTCTGGCCGTCTTCTTCGGCGGCGCGGCGCAG
TTCATGGCTGGCATCATGGAGTTCAGAGTCGGAAACACGTTTGGTACTACCGTTCACTGCTCGTACGGTGCCTTT
TGGCTTGCTTTTGCCATGCTACGCGTGCCTTCGCTCGGCATTCAAGAGGCTTACCGCGGCGACGAGCGGGCTTTG
AGCTTCGCCATTGGTATCATGCTTATTCTTTGGTGCTTTCTCACACTAATCTTTGTCGTCGCCGCTCTTCGTACC
AACCTGGCTATTCTCCTCGTTCTCGGCTTTCTCGCCCTCACCTTTTTCTTTCTGAGCATCGGCCAGTTCGTCTCT
ACCAGTCACCCCATCGCTGCTCGACGCGTCACCCGTGCCGGTGGCGTCTTCGGCGCTCTCTGTGCCCTGGGCGCC
TTTTACGCCGGCAGCTCGGCCCTCATGACCGAGGACACGACCTGGGTTCGCTTCCCGCTCGGCCAGTTCTCCTAC
AAGTCGCGGAGACGGGCCGTCGCCGATACCGTCTGA
Gene >Ophio5|4789
ATGGCCTCATCGACCGGAGCACCGTCCCACGCTGGCGAGAACGCATACATGGAAGCCAACGAACTAGGCTACAGC
TCAGCTCGCAAGACGCACCAAGGGACCGTCTCACAAGTCGGCGACCCCCAGTTCTTCCGTCTGGCCAATCCAGGC
CCGCTGGGTCTCATCAGCTTCGCCCTGACGACCTTTTGTCTGAGCATCTACCTCTGCGGTGCTGGGTCAGTCTCC
TCTCCCCCCCCCTGGCAAAGCCTCGTCTTATCAAATAAAGGATAGCCTTCCCGATGGCAACCCGCTCGGAACTGT
CGGTCCAGACCAAGCCATCTTCGGTCTGGCCGTCTTCTTCGGCGGCGCGGCGCAGTTCATGGCTGGCATCATGGA
GTTCAGAGTCGGAAACACGTTTGGTACTACCGTTCACTGCTCGTACGGTGCCTTTTGGCTTGCTTTTGCCATGCT
ACGCGTGCCTTCGCTCGGCATTCAAGAGGCTTACCGCGGCGACGAGCGGGCTTTGAGCTTCGCCATTGGTATCAT
GCTTATTCTTTGGTGCTTTCTCACACTAATCTTTGTCGTCGCCGCTCTTCGTACCAACCTGGCTATTCTCCTCGT
TCTCGGCTTTCTCGCCCTCACCTTTTTCTTTCTGAGCATCGGCCAGTTCGTCTCTACCAGTCACCCCATCGCTGC
TCGACGCGTCACCCGTGCCGGTGGCGTCTTCGGCGCTCTCTGTGCCCTGGGCGCCTTTTACGCCGGCAGCTCGGC
CCTCATGACCGAGGACACGACCTGGGTTCGCTTCCCGCTCGGCCAGTTCTCCTACAAGTCGCGGAGACGGGCCGT
CGCCGATACCGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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