Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4788
Gene name
Locationscaffold_382:16113..17019
Strand-
Gene length (bp)906
Transcript length (bp)906
Coding sequence length (bp)903
Protein length (aa) 301

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00226 DnaJ DnaJ domain 3.8E-09 61 127

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q75BG6|JID1_ASHGO J domain-containing protein 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=JID1 PE=3 SV=1 34 135 4.0E-17
sp|Q12350|JID1_YEAST J domain-containing protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=JID1 PE=1 SV=1 53 133 5.0E-08
sp|Q9Y7T0|YCJ3_SCHPO Uncharacterized J domain-containing protein C63.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC63.03 PE=3 SV=2 62 130 1.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 206 225 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4788
MRSHLVAALWLACGPSPAPFLLPIRPLPSCNPRRRSIPCSSRAASVSSDVPAWPRSPHPSPYDVLGMPRDSPYSK
ARFYQLVKLYHPDSHACSSSSALPPAVRLERYRLVVAAHDILSDPAKRRLYDLHGLGWLHHGCHSELAPHRQQSE
PVRRTQPDPLWRHRPGSAANNATWEDWVAWHEARRRRTGDASPDWMRASTEVKVRFSSLLVYLVLIASVFSFLVT
ESSSKREAQRAQQRTAAIGQEVRRSTEAKAGRSMDERVDHFLRYRHNEWHLRYRRNANDHVPTTTSTEVAPRPNR
P
Coding >Ophio5|4788
ATGCGCTCCCATCTCGTCGCCGCGCTATGGCTCGCTTGCGGACCTTCTCCTGCTCCTTTCCTCTTACCGATTCGA
CCTTTACCGTCGTGCAACCCCCGACGGCGCTCTATACCATGCTCCTCCCGCGCCGCCTCCGTCTCGTCCGACGTC
CCGGCCTGGCCTCGATCTCCTCACCCGTCTCCCTACGACGTGTTGGGCATGCCCCGCGACAGTCCTTACTCCAAG
GCGCGCTTCTATCAGCTCGTCAAGCTGTATCACCCGGACAGCCATGCCTGTTCCTCGTCGTCGGCTCTTCCGCCC
GCCGTCCGCCTCGAGCGCTACCGGCTCGTGGTCGCCGCCCATGATATCCTCAGCGACCCGGCCAAGCGACGTCTA
TACGACCTTCACGGTTTGGGCTGGCTTCACCATGGCTGCCATTCCGAGCTTGCTCCCCACCGACAACAATCTGAG
CCCGTTAGGCGCACTCAGCCTGACCCTCTCTGGCGTCATCGTCCCGGATCGGCGGCGAACAACGCTACGTGGGAG
GACTGGGTGGCGTGGCATGAGGCACGTCGTCGTCGGACTGGCGACGCTTCACCCGATTGGATGAGGGCTAGCACC
GAGGTCAAAGTCAGGTTTAGCTCCTTGCTCGTCTACCTCGTCCTCATCGCCTCCGTCTTCAGTTTCCTCGTGACA
GAGTCGTCGAGCAAGAGAGAAGCTCAGCGCGCGCAGCAGCGGACGGCCGCCATCGGACAGGAGGTCCGCAGGAGC
ACAGAGGCCAAGGCCGGCAGGTCCATGGACGAGAGGGTCGATCACTTTTTGCGATACAGGCATAACGAGTGGCAC
TTGCGCTACAGGCGGAATGCCAATGATCATGTGCCTACAACAACATCTACTGAAGTCGCCCCGCGGCCCAATAGG
CCT
Transcript >Ophio5|4788
ATGCGCTCCCATCTCGTCGCCGCGCTATGGCTCGCTTGCGGACCTTCTCCTGCTCCTTTCCTCTTACCGATTCGA
CCTTTACCGTCGTGCAACCCCCGACGGCGCTCTATACCATGCTCCTCCCGCGCCGCCTCCGTCTCGTCCGACGTC
CCGGCCTGGCCTCGATCTCCTCACCCGTCTCCCTACGACGTGTTGGGCATGCCCCGCGACAGTCCTTACTCCAAG
GCGCGCTTCTATCAGCTCGTCAAGCTGTATCACCCGGACAGCCATGCCTGTTCCTCGTCGTCGGCTCTTCCGCCC
GCCGTCCGCCTCGAGCGCTACCGGCTCGTGGTCGCCGCCCATGATATCCTCAGCGACCCGGCCAAGCGACGTCTA
TACGACCTTCACGGTTTGGGCTGGCTTCACCATGGCTGCCATTCCGAGCTTGCTCCCCACCGACAACAATCTGAG
CCCGTTAGGCGCACTCAGCCTGACCCTCTCTGGCGTCATCGTCCCGGATCGGCGGCGAACAACGCTACGTGGGAG
GACTGGGTGGCGTGGCATGAGGCACGTCGTCGTCGGACTGGCGACGCTTCACCCGATTGGATGAGGGCTAGCACC
GAGGTCAAAGTCAGGTTTAGCTCCTTGCTCGTCTACCTCGTCCTCATCGCCTCCGTCTTCAGTTTCCTCGTGACA
GAGTCGTCGAGCAAGAGAGAAGCTCAGCGCGCGCAGCAGCGGACGGCCGCCATCGGACAGGAGGTCCGCAGGAGC
ACAGAGGCCAAGGCCGGCAGGTCCATGGACGAGAGGGTCGATCACTTTTTGCGATACAGGCATAACGAGTGGCAC
TTGCGCTACAGGCGGAATGCCAATGATCATGTGCCTACAACAACATCTACTGAAGTCGCCCCGCGGCCCAATAGG
CCTTGA
Gene >Ophio5|4788
ATGCGCTCCCATCTCGTCGCCGCGCTATGGCTCGCTTGCGGACCTTCTCCTGCTCCTTTCCTCTTACCGATTCGA
CCTTTACCGTCGTGCAACCCCCGACGGCGCTCTATACCATGCTCCTCCCGCGCCGCCTCCGTCTCGTCCGACGTC
CCGGCCTGGCCTCGATCTCCTCACCCGTCTCCCTACGACGTGTTGGGCATGCCCCGCGACAGTCCTTACTCCAAG
GCGCGCTTCTATCAGCTCGTCAAGCTGTATCACCCGGACAGCCATGCCTGTTCCTCGTCGTCGGCTCTTCCGCCC
GCCGTCCGCCTCGAGCGCTACCGGCTCGTGGTCGCCGCCCATGATATCCTCAGCGACCCGGCCAAGCGACGTCTA
TACGACCTTCACGGTTTGGGCTGGCTTCACCATGGCTGCCATTCCGAGCTTGCTCCCCACCGACAACAATCTGAG
CCCGTTAGGCGCACTCAGCCTGACCCTCTCTGGCGTCATCGTCCCGGATCGGCGGCGAACAACGCTACGTGGGAG
GACTGGGTGGCGTGGCATGAGGCACGTCGTCGTCGGACTGGCGACGCTTCACCCGATTGGATGAGGGCTAGCACC
GAGGTCAAAGTCAGGTTTAGCTCCTTGCTCGTCTACCTCGTCCTCATCGCCTCCGTCTTCAGTTTCCTCGTGACA
GAGTCGTCGAGCAAGAGAGAAGCTCAGCGCGCGCAGCAGCGGACGGCCGCCATCGGACAGGAGGTCCGCAGGAGC
ACAGAGGCCAAGGCCGGCAGGTCCATGGACGAGAGGGTCGATCACTTTTTGCGATACAGGCATAACGAGTGGCAC
TTGCGCTACAGGCGGAATGCCAATGATCATGTGCCTACAACAACATCTACTGAAGTCGCCCCGCGGCCCAATAGG
CCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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