Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|4787
Gene name
Location	scaffold_382:13963..16027
Strand	+
Gene length (bp)	2064
Transcript length (bp)	1818
Coding sequence length (bp)	1815
Protein length (aa)	605

Overview

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Lysosome/Vacuole	Signal peptide\|Transmembrane domain	0.1631	0.1404	0.1122	0.5155	0.1216	0.0255	0.4812	0.6665	0.4094	0.007

SignalP

(None)

Transmembrane Domains

Domain #	Start	End	Length
1	222	244	22
2	303	325	22
3	330	352	22
4	365	384	19
5	433	455	22
6	488	510	22
7	525	547	22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	32.56	17.31	47.82
CcL	In ants, during behavior modification	10.40	4.23	16.57
CcD	In ants, recently dead	18.33	8.76	27.90

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.000286	yes
SC16a	CcD	0.017998	yes
CcL	CcD	0.043290	yes

Orthologs

Orthofinder run ID	4
Orthogroup	6017
Change Orthofinder run

Species	Protein ID
Ophiocordyceps camponoti-floridani	Ophcf2\|05229
Ophiocordyceps camponoti-rufipedis	Ophun1\|7536
Ophiocordyceps kimflemingae	Ophio5\|4787 (this protein)
Ophiocordyceps subramaniannii	Hirsu2\|11111

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|4787 MMHLRGREWKAGAVMMTISLPSAAASATTALSIELLAEDKMGGVTGFFPFNDMEDISSIESQGLFQKLPIVPDQQ GRLRISLFPAGCRLHHHHHHGRRGEADCQKACADARLIFGSVDNFYNCAALASLAYWTRSQNRYHVPLEAERNVS VLMAGLPLAHFDAMPTLASFISCAEAACGGDGLHKPCSAEVKALTPRSPPLVVLEAMGSFCPQLPVEINPDIFGP GVLISYVLQVCFASLLYLFLKAFTLWVHYVEQRRPEQKTSVSRLSLPRRLTWHNSSALSRTSMAIAATLVEFQEA QCWFVFAIQIASILAVVVSSQGGTFWGEIIVNAAVAFHVSQNGILSMFLIQICLHREGIHNWHTFVGFFAEYLLA IVATSQTIYFRDAFELFRRQKQLKACGNNPSPRRYCSSIRGIDGFNLTFFPRPYVYKIVFLVLDSVAILILLVDQ LSWTLRANRHTKDLRIRGHPLGRGPVGRYKSAWKRFSTWMWRTLELAFFIINILYMVSLVKVFNDNSFDANKWSY GQIIAMTVWGPVIVKLFDLVIAGPPKNGSKLTSGPPRLRIDNVINRRLEPSREECGGYSPKCRQSDRSNGDVENG GRERG
Coding	>Ophio5\|4787 ATGATGCATCTTCGCGGACGAGAATGGAAGGCTGGCGCCGTCATGATGACCATCTCGCTCCCCTCGGCTGCTGCT TCGGCCACCACGGCGCTATCTATCGAGCTGCTAGCGGAGGACAAGATGGGTGGCGTGACGGGCTTCTTTCCCTTC AATGATATGGAAGACATCAGCTCCATCGAGAGTCAGGGCCTGTTTCAGAAACTTCCCATTGTGCCGGATCAGCAG GGTCGGCTACGCATCTCGCTCTTTCCCGCCGGTTGTCGTCTTCATCATCATCATCATCATGGTCGACGAGGTGAG GCGGATTGTCAAAAGGCCTGTGCTGATGCTCGTCTTATCTTCGGCTCCGTCGATAACTTTTATAATTGCGCCGCT TTGGCCTCCCTCGCTTATTGGACTCGCTCTCAAAATCGGTACCATGTTCCTCTCGAGGCCGAAAGGAACGTCAGT GTGCTCATGGCTGGCCTGCCGTTGGCTCACTTTGATGCCATGCCGACGCTCGCCTCTTTTATTTCCTGTGCTGAG GCTGCCTGCGGTGGCGATGGCCTTCATAAGCCCTGCAGTGCCGAGGTCAAGGCCCTCACGCCCCGGTCGCCTCCC CTTGTCGTCCTCGAGGCCATGGGCTCTTTCTGTCCTCAGCTACCGGTCGAAATCAACCCCGACATCTTTGGACCT GGTGTACTCATCTCGTACGTCCTTCAGGTCTGCTTCGCCAGCCTCCTCTACCTCTTTCTCAAAGCCTTTACCCTA TGGGTTCACTACGTCGAGCAGAGACGACCGGAGCAGAAGACCTCGGTCTCCCGCTTGAGCCTCCCACGCCGTCTC ACCTGGCACAACTCGTCGGCCCTGTCCCGCACCAGCATGGCCATCGCGGCCACGCTCGTCGAGTTCCAGGAGGCC CAGTGCTGGTTCGTCTTCGCCATCCAGATCGCCTCCATTCTCGCCGTCGTCGTCAGCTCTCAAGGGGGCACCTTT TGGGGCGAAATCATCGTCAACGCCGCCGTCGCCTTTCACGTCAGTCAGAACGGCATTCTGTCCATGTTTCTCATA CAGATCTGTTTGCATCGTGAGGGTATTCATAATTGGCACACCTTTGTCGGCTTCTTCGCCGAGTACCTCTTGGCC ATCGTCGCCACCAGCCAGACCATCTACTTCCGCGACGCCTTTGAGCTGTTCCGCAGGCAGAAGCAGCTCAAGGCC TGCGGCAACAACCCCAGCCCCCGAAGGTACTGCTCCTCCATACGCGGCATCGACGGCTTCAACTTGACCTTCTTC CCCCGCCCCTACGTCTACAAGATTGTCTTTCTCGTCCTCGATTCCGTCGCCATCCTCATCCTGCTCGTCGATCAG CTTAGCTGGACGCTGCGGGCGAACCGACACACAAAGGACCTCCGCATCCGCGGCCATCCCCTCGGCCGCGGCCCC GTCGGCAGATACAAGTCGGCCTGGAAACGGTTTTCGACGTGGATGTGGCGGACGCTGGAGCTGGCCTTCTTTATC ATCAACATTCTCTACATGGTGTCACTGGTCAAGGTCTTCAACGACAACAGCTTCGATGCCAACAAGTGGTCTTAC GGACAAATCATCGCCATGACGGTTTGGGGGCCCGTCATTGTCAAGCTCTTTGACCTCGTCATTGCCGGCCCGCCC AAGAACGGATCGAAGCTCACTTCAGGTCCTCCCCGACTGCGCATCGACAACGTCATCAACCGTCGACTGGAGCCG TCGAGAGAAGAGTGCGGAGGTTACTCGCCGAAATGTCGTCAGTCGGACCGATCGAACGGTGACGTAGAGAATGGC GGGCGTGAACGAGGC
Transcript	>Ophio5\|4787 ATGATGCATCTTCGCGGACGAGAATGGAAGGCTGGCGCCGTCATGATGACCATCTCGCTCCCCTCGGCTGCTGCT TCGGCCACCACGGCGCTATCTATCGAGCTGCTAGCGGAGGACAAGATGGGTGGCGTGACGGGCTTCTTTCCCTTC AATGATATGGAAGACATCAGCTCCATCGAGAGTCAGGGCCTGTTTCAGAAACTTCCCATTGTGCCGGATCAGCAG GGTCGGCTACGCATCTCGCTCTTTCCCGCCGGTTGTCGTCTTCATCATCATCATCATCATGGTCGACGAGGTGAG GCGGATTGTCAAAAGGCCTGTGCTGATGCTCGTCTTATCTTCGGCTCCGTCGATAACTTTTATAATTGCGCCGCT TTGGCCTCCCTCGCTTATTGGACTCGCTCTCAAAATCGGTACCATGTTCCTCTCGAGGCCGAAAGGAACGTCAGT GTGCTCATGGCTGGCCTGCCGTTGGCTCACTTTGATGCCATGCCGACGCTCGCCTCTTTTATTTCCTGTGCTGAG GCTGCCTGCGGTGGCGATGGCCTTCATAAGCCCTGCAGTGCCGAGGTCAAGGCCCTCACGCCCCGGTCGCCTCCC CTTGTCGTCCTCGAGGCCATGGGCTCTTTCTGTCCTCAGCTACCGGTCGAAATCAACCCCGACATCTTTGGACCT GGTGTACTCATCTCGTACGTCCTTCAGGTCTGCTTCGCCAGCCTCCTCTACCTCTTTCTCAAAGCCTTTACCCTA TGGGTTCACTACGTCGAGCAGAGACGACCGGAGCAGAAGACCTCGGTCTCCCGCTTGAGCCTCCCACGCCGTCTC ACCTGGCACAACTCGTCGGCCCTGTCCCGCACCAGCATGGCCATCGCGGCCACGCTCGTCGAGTTCCAGGAGGCC CAGTGCTGGTTCGTCTTCGCCATCCAGATCGCCTCCATTCTCGCCGTCGTCGTCAGCTCTCAAGGGGGCACCTTT TGGGGCGAAATCATCGTCAACGCCGCCGTCGCCTTTCACGTCAGTCAGAACGGCATTCTGTCCATGTTTCTCATA CAGATCTGTTTGCATCGTGAGGGTATTCATAATTGGCACACCTTTGTCGGCTTCTTCGCCGAGTACCTCTTGGCC ATCGTCGCCACCAGCCAGACCATCTACTTCCGCGACGCCTTTGAGCTGTTCCGCAGGCAGAAGCAGCTCAAGGCC TGCGGCAACAACCCCAGCCCCCGAAGGTACTGCTCCTCCATACGCGGCATCGACGGCTTCAACTTGACCTTCTTC CCCCGCCCCTACGTCTACAAGATTGTCTTTCTCGTCCTCGATTCCGTCGCCATCCTCATCCTGCTCGTCGATCAG CTTAGCTGGACGCTGCGGGCGAACCGACACACAAAGGACCTCCGCATCCGCGGCCATCCCCTCGGCCGCGGCCCC GTCGGCAGATACAAGTCGGCCTGGAAACGGTTTTCGACGTGGATGTGGCGGACGCTGGAGCTGGCCTTCTTTATC ATCAACATTCTCTACATGGTGTCACTGGTCAAGGTCTTCAACGACAACAGCTTCGATGCCAACAAGTGGTCTTAC GGACAAATCATCGCCATGACGGTTTGGGGGCCCGTCATTGTCAAGCTCTTTGACCTCGTCATTGCCGGCCCGCCC AAGAACGGATCGAAGCTCACTTCAGGTCCTCCCCGACTGCGCATCGACAACGTCATCAACCGTCGACTGGAGCCG TCGAGAGAAGAGTGCGGAGGTTACTCGCCGAAATGTCGTCAGTCGGACCGATCGAACGGTGACGTAGAGAATGGC GGGCGTGAACGAGGCTGA
Gene	>Ophio5\|4787 ATGATGCATCTTCGCGGACGAGAATGGAAGGCTGGCGCCGTCATGATGACCATCTCGCTCCCCTCGGCTGCTGCT TCGGCCACCACGGCGCTATCTATCGAGCTGCTAGCGGAGGACAAGATGGGTGGCGTGACGGGCTTCTTTCCCTTC AATGATATGGAAGACATCAGCTCCATCGAGAGTCAGGGCCTGTTTCAGAAACTTCCCATTGTGCCGGATCAGCAG GGTCGGCTACGCATCTCGCTCTTTCCCGCCGGTTGTCGTCTTCATCATCATCATCATCATGGTCGACGAGGTGAG GCGGATTGTCAAAAGGCCTGTGCTGATGCTCGTCTTATCTTCGGCTCCGTCGATAACTTTTATAATTGCGCCGCT TTGGCCTCCCTCGCTTATTGGACTCGCTCTCAAAATCGGTACCATGTTCCTCTCGAGGCCGAAAGGAACGTCAGT GTGCTCATGGCTGGCCTGCCGTTGGCTCACTTTGATGCCATGCCGACGCTCGCCTCTTTTATTTCCTGTGCTGAG GCTGCCTGCGGTGGCGATGGCCTTCATAAGCCCTGCAGTGCCGAGGTCAAGGCCCTCACGCCCCGGTCGCCTCCC CTTGTCGTCCTCGAGGCCATGGGCTCTTTCTGTCCTCAGCTACCGGTCGAAATCAACCCCGACATCTTTGGACCT GGTGTGAGCGGCAAGCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCTTTTT TTTTTTCTTTTCTCTCTTCTGCAGACCACACACACACACACACACACACGTCATCGTCTCCGACATCAATCGCTG ATGCCCCCCCCCCGCTGCCTTCCAGGTACTCATCTCGTACGTCCTTCAGGTCTGCTTCGCCAGCCTCCTCTACCT CTTTCTCAAAGCCTTTACCCTATGGGTTCACTACGTCGAGCAGAGACGACCGGAGCAGAAGACCTCGGTCTCCCG CTTGAGCCTCCCACGCCGTCTCACCTGGCACAACTCGTCGGCCCTGTCCCGCACCAGCATGGCCATCGCGGCCAC GCTCGTCGAGTTCCAGGAGGCCCAGTGCTGGTTCGTCTTCGCCATCCAGATCGCCTCCATTCTCGCCGTCGTCGT CAGCTCTCAAGGGGGCACCTTTTGGGGCGAAATCATCGTCAACGCCGCCGTCGCCTTTCACGTCAGTCAGAACGG CATTCTGTCCATGTTTCTCATACAGATCTGTTTGCATCGTGAGGGTATTCATAATTGGCACACCTTTGTCGGCTT CTTCGCCGAGTACCTCTTGGCCATCGTCGCCACCAGCCAGACCATCTACTTCCGCGACGCCTTTGAGCTGTTCCG CAGGCAGAAGCAGCTCAAGGCCTGCGGCAACAACCCCAGCCCCCGAAGGTACTGCTCCTCCATACGCGGCATCGA CGGCTTCAACTTGACCTTCTTCCCCCGCCCCTACGTCTACAAGATTGTCTTTCTCGTCCTCGATTCCGTCGCCAT CCTCATCCTGCTCGTCGATCAGCTTAGCTGGACGCTGCGGGCGAACCGACACACAAAGGACCTCCGCATCCGCGG CCATCCCCTCGGCCGCGGCCCCGTCGGCAGATACAAGTCGGCCTGGAAACGGTTTTCGACGTGGATGTGGCGGAC GCTGGAGCTGGCCTTCTTTATCATCAACATTCTCTACATGGTGTCACTGGTCAAGGTCTTCAACGACAACAGCTT CGATGCCAACAAGTGGTCTTACGGACAAATCATCGCCATGACGGTTTGGGGGCCCGTCATTGTCAAGCTCTTTGA CCTCGTCATTGGTGAGTCCCCCCGTCTCTTGTGCCGTGGAGACAAAAAATCCGAAGCCTTGGCTGCTGACCGGCC AACGACGCAGCCGGCCCGCCCAAGAACGGATCGAAGCTCACTTCAGGTCCTCCCCGACTGCGCATCGACAACGTC ATCAACCGTCGACTGGAGCCGTCGAGAGAAGAGTGCGGAGGTTACTCGCCGAAATGTCGTCAGTCGGACCGATCG AACGGTGACGTAGAGAATGGCGGGCGTGAACGAGGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail