Protein ID | Ophio5|4787 |
Gene name | |
Location | scaffold_382:13963..16027 |
Strand | + |
Gene length (bp) | 2064 |
Transcript length (bp) | 1818 |
Coding sequence length (bp) | 1815 |
Protein length (aa) | 605 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 31 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 222 | 244 | 22 |
2 | 303 | 325 | 22 |
3 | 330 | 352 | 22 |
4 | 365 | 384 | 19 |
5 | 433 | 455 | 22 |
6 | 488 | 510 | 22 |
7 | 525 | 547 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4787 MMHLRGREWKAGAVMMTISLPSAAASATTALSIELLAEDKMGGVTGFFPFNDMEDISSIESQGLFQKLPIVPDQQ GRLRISLFPAGCRLHHHHHHGRRGEADCQKACADARLIFGSVDNFYNCAALASLAYWTRSQNRYHVPLEAERNVS VLMAGLPLAHFDAMPTLASFISCAEAACGGDGLHKPCSAEVKALTPRSPPLVVLEAMGSFCPQLPVEINPDIFGP GVLISYVLQVCFASLLYLFLKAFTLWVHYVEQRRPEQKTSVSRLSLPRRLTWHNSSALSRTSMAIAATLVEFQEA QCWFVFAIQIASILAVVVSSQGGTFWGEIIVNAAVAFHVSQNGILSMFLIQICLHREGIHNWHTFVGFFAEYLLA IVATSQTIYFRDAFELFRRQKQLKACGNNPSPRRYCSSIRGIDGFNLTFFPRPYVYKIVFLVLDSVAILILLVDQ LSWTLRANRHTKDLRIRGHPLGRGPVGRYKSAWKRFSTWMWRTLELAFFIINILYMVSLVKVFNDNSFDANKWSY GQIIAMTVWGPVIVKLFDLVIAGPPKNGSKLTSGPPRLRIDNVINRRLEPSREECGGYSPKCRQSDRSNGDVENG GRERG |
Coding | >Ophio5|4787 ATGATGCATCTTCGCGGACGAGAATGGAAGGCTGGCGCCGTCATGATGACCATCTCGCTCCCCTCGGCTGCTGCT TCGGCCACCACGGCGCTATCTATCGAGCTGCTAGCGGAGGACAAGATGGGTGGCGTGACGGGCTTCTTTCCCTTC AATGATATGGAAGACATCAGCTCCATCGAGAGTCAGGGCCTGTTTCAGAAACTTCCCATTGTGCCGGATCAGCAG GGTCGGCTACGCATCTCGCTCTTTCCCGCCGGTTGTCGTCTTCATCATCATCATCATCATGGTCGACGAGGTGAG GCGGATTGTCAAAAGGCCTGTGCTGATGCTCGTCTTATCTTCGGCTCCGTCGATAACTTTTATAATTGCGCCGCT TTGGCCTCCCTCGCTTATTGGACTCGCTCTCAAAATCGGTACCATGTTCCTCTCGAGGCCGAAAGGAACGTCAGT GTGCTCATGGCTGGCCTGCCGTTGGCTCACTTTGATGCCATGCCGACGCTCGCCTCTTTTATTTCCTGTGCTGAG GCTGCCTGCGGTGGCGATGGCCTTCATAAGCCCTGCAGTGCCGAGGTCAAGGCCCTCACGCCCCGGTCGCCTCCC CTTGTCGTCCTCGAGGCCATGGGCTCTTTCTGTCCTCAGCTACCGGTCGAAATCAACCCCGACATCTTTGGACCT GGTGTACTCATCTCGTACGTCCTTCAGGTCTGCTTCGCCAGCCTCCTCTACCTCTTTCTCAAAGCCTTTACCCTA TGGGTTCACTACGTCGAGCAGAGACGACCGGAGCAGAAGACCTCGGTCTCCCGCTTGAGCCTCCCACGCCGTCTC ACCTGGCACAACTCGTCGGCCCTGTCCCGCACCAGCATGGCCATCGCGGCCACGCTCGTCGAGTTCCAGGAGGCC CAGTGCTGGTTCGTCTTCGCCATCCAGATCGCCTCCATTCTCGCCGTCGTCGTCAGCTCTCAAGGGGGCACCTTT TGGGGCGAAATCATCGTCAACGCCGCCGTCGCCTTTCACGTCAGTCAGAACGGCATTCTGTCCATGTTTCTCATA CAGATCTGTTTGCATCGTGAGGGTATTCATAATTGGCACACCTTTGTCGGCTTCTTCGCCGAGTACCTCTTGGCC ATCGTCGCCACCAGCCAGACCATCTACTTCCGCGACGCCTTTGAGCTGTTCCGCAGGCAGAAGCAGCTCAAGGCC TGCGGCAACAACCCCAGCCCCCGAAGGTACTGCTCCTCCATACGCGGCATCGACGGCTTCAACTTGACCTTCTTC CCCCGCCCCTACGTCTACAAGATTGTCTTTCTCGTCCTCGATTCCGTCGCCATCCTCATCCTGCTCGTCGATCAG CTTAGCTGGACGCTGCGGGCGAACCGACACACAAAGGACCTCCGCATCCGCGGCCATCCCCTCGGCCGCGGCCCC GTCGGCAGATACAAGTCGGCCTGGAAACGGTTTTCGACGTGGATGTGGCGGACGCTGGAGCTGGCCTTCTTTATC ATCAACATTCTCTACATGGTGTCACTGGTCAAGGTCTTCAACGACAACAGCTTCGATGCCAACAAGTGGTCTTAC GGACAAATCATCGCCATGACGGTTTGGGGGCCCGTCATTGTCAAGCTCTTTGACCTCGTCATTGCCGGCCCGCCC AAGAACGGATCGAAGCTCACTTCAGGTCCTCCCCGACTGCGCATCGACAACGTCATCAACCGTCGACTGGAGCCG TCGAGAGAAGAGTGCGGAGGTTACTCGCCGAAATGTCGTCAGTCGGACCGATCGAACGGTGACGTAGAGAATGGC GGGCGTGAACGAGGC |
Transcript | >Ophio5|4787 ATGATGCATCTTCGCGGACGAGAATGGAAGGCTGGCGCCGTCATGATGACCATCTCGCTCCCCTCGGCTGCTGCT TCGGCCACCACGGCGCTATCTATCGAGCTGCTAGCGGAGGACAAGATGGGTGGCGTGACGGGCTTCTTTCCCTTC AATGATATGGAAGACATCAGCTCCATCGAGAGTCAGGGCCTGTTTCAGAAACTTCCCATTGTGCCGGATCAGCAG GGTCGGCTACGCATCTCGCTCTTTCCCGCCGGTTGTCGTCTTCATCATCATCATCATCATGGTCGACGAGGTGAG GCGGATTGTCAAAAGGCCTGTGCTGATGCTCGTCTTATCTTCGGCTCCGTCGATAACTTTTATAATTGCGCCGCT TTGGCCTCCCTCGCTTATTGGACTCGCTCTCAAAATCGGTACCATGTTCCTCTCGAGGCCGAAAGGAACGTCAGT GTGCTCATGGCTGGCCTGCCGTTGGCTCACTTTGATGCCATGCCGACGCTCGCCTCTTTTATTTCCTGTGCTGAG GCTGCCTGCGGTGGCGATGGCCTTCATAAGCCCTGCAGTGCCGAGGTCAAGGCCCTCACGCCCCGGTCGCCTCCC CTTGTCGTCCTCGAGGCCATGGGCTCTTTCTGTCCTCAGCTACCGGTCGAAATCAACCCCGACATCTTTGGACCT GGTGTACTCATCTCGTACGTCCTTCAGGTCTGCTTCGCCAGCCTCCTCTACCTCTTTCTCAAAGCCTTTACCCTA TGGGTTCACTACGTCGAGCAGAGACGACCGGAGCAGAAGACCTCGGTCTCCCGCTTGAGCCTCCCACGCCGTCTC ACCTGGCACAACTCGTCGGCCCTGTCCCGCACCAGCATGGCCATCGCGGCCACGCTCGTCGAGTTCCAGGAGGCC CAGTGCTGGTTCGTCTTCGCCATCCAGATCGCCTCCATTCTCGCCGTCGTCGTCAGCTCTCAAGGGGGCACCTTT TGGGGCGAAATCATCGTCAACGCCGCCGTCGCCTTTCACGTCAGTCAGAACGGCATTCTGTCCATGTTTCTCATA CAGATCTGTTTGCATCGTGAGGGTATTCATAATTGGCACACCTTTGTCGGCTTCTTCGCCGAGTACCTCTTGGCC ATCGTCGCCACCAGCCAGACCATCTACTTCCGCGACGCCTTTGAGCTGTTCCGCAGGCAGAAGCAGCTCAAGGCC TGCGGCAACAACCCCAGCCCCCGAAGGTACTGCTCCTCCATACGCGGCATCGACGGCTTCAACTTGACCTTCTTC CCCCGCCCCTACGTCTACAAGATTGTCTTTCTCGTCCTCGATTCCGTCGCCATCCTCATCCTGCTCGTCGATCAG CTTAGCTGGACGCTGCGGGCGAACCGACACACAAAGGACCTCCGCATCCGCGGCCATCCCCTCGGCCGCGGCCCC GTCGGCAGATACAAGTCGGCCTGGAAACGGTTTTCGACGTGGATGTGGCGGACGCTGGAGCTGGCCTTCTTTATC ATCAACATTCTCTACATGGTGTCACTGGTCAAGGTCTTCAACGACAACAGCTTCGATGCCAACAAGTGGTCTTAC GGACAAATCATCGCCATGACGGTTTGGGGGCCCGTCATTGTCAAGCTCTTTGACCTCGTCATTGCCGGCCCGCCC AAGAACGGATCGAAGCTCACTTCAGGTCCTCCCCGACTGCGCATCGACAACGTCATCAACCGTCGACTGGAGCCG TCGAGAGAAGAGTGCGGAGGTTACTCGCCGAAATGTCGTCAGTCGGACCGATCGAACGGTGACGTAGAGAATGGC GGGCGTGAACGAGGCTGA |
Gene | >Ophio5|4787 ATGATGCATCTTCGCGGACGAGAATGGAAGGCTGGCGCCGTCATGATGACCATCTCGCTCCCCTCGGCTGCTGCT TCGGCCACCACGGCGCTATCTATCGAGCTGCTAGCGGAGGACAAGATGGGTGGCGTGACGGGCTTCTTTCCCTTC AATGATATGGAAGACATCAGCTCCATCGAGAGTCAGGGCCTGTTTCAGAAACTTCCCATTGTGCCGGATCAGCAG GGTCGGCTACGCATCTCGCTCTTTCCCGCCGGTTGTCGTCTTCATCATCATCATCATCATGGTCGACGAGGTGAG GCGGATTGTCAAAAGGCCTGTGCTGATGCTCGTCTTATCTTCGGCTCCGTCGATAACTTTTATAATTGCGCCGCT TTGGCCTCCCTCGCTTATTGGACTCGCTCTCAAAATCGGTACCATGTTCCTCTCGAGGCCGAAAGGAACGTCAGT GTGCTCATGGCTGGCCTGCCGTTGGCTCACTTTGATGCCATGCCGACGCTCGCCTCTTTTATTTCCTGTGCTGAG GCTGCCTGCGGTGGCGATGGCCTTCATAAGCCCTGCAGTGCCGAGGTCAAGGCCCTCACGCCCCGGTCGCCTCCC CTTGTCGTCCTCGAGGCCATGGGCTCTTTCTGTCCTCAGCTACCGGTCGAAATCAACCCCGACATCTTTGGACCT GGTGTGAGCGGCAAGCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCTTTTT TTTTTTCTTTTCTCTCTTCTGCAGACCACACACACACACACACACACACGTCATCGTCTCCGACATCAATCGCTG ATGCCCCCCCCCCGCTGCCTTCCAGGTACTCATCTCGTACGTCCTTCAGGTCTGCTTCGCCAGCCTCCTCTACCT CTTTCTCAAAGCCTTTACCCTATGGGTTCACTACGTCGAGCAGAGACGACCGGAGCAGAAGACCTCGGTCTCCCG CTTGAGCCTCCCACGCCGTCTCACCTGGCACAACTCGTCGGCCCTGTCCCGCACCAGCATGGCCATCGCGGCCAC GCTCGTCGAGTTCCAGGAGGCCCAGTGCTGGTTCGTCTTCGCCATCCAGATCGCCTCCATTCTCGCCGTCGTCGT CAGCTCTCAAGGGGGCACCTTTTGGGGCGAAATCATCGTCAACGCCGCCGTCGCCTTTCACGTCAGTCAGAACGG CATTCTGTCCATGTTTCTCATACAGATCTGTTTGCATCGTGAGGGTATTCATAATTGGCACACCTTTGTCGGCTT CTTCGCCGAGTACCTCTTGGCCATCGTCGCCACCAGCCAGACCATCTACTTCCGCGACGCCTTTGAGCTGTTCCG CAGGCAGAAGCAGCTCAAGGCCTGCGGCAACAACCCCAGCCCCCGAAGGTACTGCTCCTCCATACGCGGCATCGA CGGCTTCAACTTGACCTTCTTCCCCCGCCCCTACGTCTACAAGATTGTCTTTCTCGTCCTCGATTCCGTCGCCAT CCTCATCCTGCTCGTCGATCAGCTTAGCTGGACGCTGCGGGCGAACCGACACACAAAGGACCTCCGCATCCGCGG CCATCCCCTCGGCCGCGGCCCCGTCGGCAGATACAAGTCGGCCTGGAAACGGTTTTCGACGTGGATGTGGCGGAC GCTGGAGCTGGCCTTCTTTATCATCAACATTCTCTACATGGTGTCACTGGTCAAGGTCTTCAACGACAACAGCTT CGATGCCAACAAGTGGTCTTACGGACAAATCATCGCCATGACGGTTTGGGGGCCCGTCATTGTCAAGCTCTTTGA CCTCGTCATTGGTGAGTCCCCCCGTCTCTTGTGCCGTGGAGACAAAAAATCCGAAGCCTTGGCTGCTGACCGGCC AACGACGCAGCCGGCCCGCCCAAGAACGGATCGAAGCTCACTTCAGGTCCTCCCCGACTGCGCATCGACAACGTC ATCAACCGTCGACTGGAGCCGTCGAGAGAAGAGTGCGGAGGTTACTCGCCGAAATGTCGTCAGTCGGACCGATCG AACGGTGACGTAGAGAATGGCGGGCGTGAACGAGGCTGA |