Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4783
Gene name
Locationscaffold_382:1468..2741
Strand-
Gene length (bp)1273
Transcript length (bp)927
Coding sequence length (bp)924
Protein length (aa) 308

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07510 DUF1524 Protein of unknown function (DUF1524) 8.0E-07 177 302

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4AK18|A4619_ARTBC Uncharacterized secreted protein ARB_06907 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04619 PE=1 SV=2 108 308 2.0E-59

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 66 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4783
MVTGRYDADTSAAGELPPWGKYYQQAIEPSASECRGPAAGDAPLSQKRTVVIVVVVLLLPQAVLGWWSEVRRSQG
AGQRIEKKGGGNPASRQFVFGYKLQSTTPTPPGIPAAPAARTLLAGLRVAKSGSGSGYSRAKFPHWETVDGGCNV
RTVVLRRDGRGVVVDDECVVTDGRWTSPYDGETVNDASEIDIDHLVPLKNAWIPRTYTRTRPRKNRRRRLTPSHE
SGASDWDADERRSFANDVASPQLWAVTSSINREKSDGSPDEWLPPVQAFRCVYVESWVRVKSAYRLAVTKDEKET
LSTVLESC
Coding >Ophio5|4783
ATGGTGACTGGTCGATACGACGCTGACACTTCAGCCGCCGGCGAGCTGCCCCCTTGGGGCAAGTATTATCAACAA
GCCATCGAGCCATCGGCTTCGGAATGCCGGGGCCCAGCCGCAGGAGATGCCCCTTTAAGCCAAAAGCGAACCGTC
GTCATCGTTGTCGTCGTCCTCCTCCTCCCCCAAGCCGTTTTAGGCTGGTGGTCGGAAGTCCGACGCTCGCAGGGC
GCTGGCCAAAGAATCGAAAAAAAGGGGGGGGGAAACCCCGCAAGCCGGCAATTTGTTTTTGGCTATAAATTGCAG
AGTACGACACCTACACCACCCGGTATCCCTGCCGCACCGGCTGCTCGTACGCTCCTAGCCGGACTGCGGGTGGCA
AAGTCCGGCTCCGGCTCTGGCTACAGCCGAGCCAAGTTTCCGCACTGGGAGACGGTTGACGGTGGGTGCAACGTG
CGAACCGTCGTCCTCCGACGTGATGGCCGTGGCGTCGTCGTTGATGACGAGTGCGTCGTGACCGATGGTCGCTGG
ACGAGTCCTTACGATGGCGAGACGGTCAACGACGCGTCTGAGATTGACATTGACCACCTGGTGCCACTGAAGAAT
GCCTGGATCCCACGTACGTACACACGTACAAGACCTAGAAAAAACCGACGACGACGACTAACGCCGTCACACGAG
TCCGGCGCCTCGGACTGGGACGCCGACGAGCGCAGAAGCTTCGCAAACGACGTCGCTAGCCCTCAGCTCTGGGCC
GTCACCAGCTCCATCAACCGCGAAAAGAGCGACGGCTCGCCTGACGAGTGGCTGCCTCCCGTCCAGGCTTTTCGC
TGCGTCTATGTCGAGAGCTGGGTTCGCGTCAAGAGCGCTTACCGCCTTGCCGTCACCAAGGATGAGAAGGAGACT
TTGTCGACGGTGCTGGAGTCGTGC
Transcript >Ophio5|4783
ATGGTGACTGGTCGATACGACGCTGACACTTCAGCCGCCGGCGAGCTGCCCCCTTGGGGCAAGTATTATCAACAA
GCCATCGAGCCATCGGCTTCGGAATGCCGGGGCCCAGCCGCAGGAGATGCCCCTTTAAGCCAAAAGCGAACCGTC
GTCATCGTTGTCGTCGTCCTCCTCCTCCCCCAAGCCGTTTTAGGCTGGTGGTCGGAAGTCCGACGCTCGCAGGGC
GCTGGCCAAAGAATCGAAAAAAAGGGGGGGGGAAACCCCGCAAGCCGGCAATTTGTTTTTGGCTATAAATTGCAG
AGTACGACACCTACACCACCCGGTATCCCTGCCGCACCGGCTGCTCGTACGCTCCTAGCCGGACTGCGGGTGGCA
AAGTCCGGCTCCGGCTCTGGCTACAGCCGAGCCAAGTTTCCGCACTGGGAGACGGTTGACGGTGGGTGCAACGTG
CGAACCGTCGTCCTCCGACGTGATGGCCGTGGCGTCGTCGTTGATGACGAGTGCGTCGTGACCGATGGTCGCTGG
ACGAGTCCTTACGATGGCGAGACGGTCAACGACGCGTCTGAGATTGACATTGACCACCTGGTGCCACTGAAGAAT
GCCTGGATCCCACGTACGTACACACGTACAAGACCTAGAAAAAACCGACGACGACGACTAACGCCGTCACACGAG
TCCGGCGCCTCGGACTGGGACGCCGACGAGCGCAGAAGCTTCGCAAACGACGTCGCTAGCCCTCAGCTCTGGGCC
GTCACCAGCTCCATCAACCGCGAAAAGAGCGACGGCTCGCCTGACGAGTGGCTGCCTCCCGTCCAGGCTTTTCGC
TGCGTCTATGTCGAGAGCTGGGTTCGCGTCAAGAGCGCTTACCGCCTTGCCGTCACCAAGGATGAGAAGGAGACT
TTGTCGACGGTGCTGGAGTCGTGCTGA
Gene >Ophio5|4783
ATGGTGACTGGTCGATACGACGCTGACACTTCAGCCGCCGGCGAGCTGCCCCCTTGGGGCAAGTATTATCAACAA
GCCATCGAGCCATCGGCTTCGGAATGCCGGGGCCCAGCCGCAGGAGATGCCCCTTTAAGCCAAAAGCGAACCGTC
GTCATCGTTGTCGTCGTCCTCCTCCTCCCCCAAGCCGTTTTAGGCTGGTGGTCGGAAGTCCGACGCTCGCAGGGC
GCTGGCCAAAGAATCGAAAAAAAGGGGGGGGGAAACCCCGCAAGCCGGCAATTTGTTTTTGGCTATAAATTGCAG
AGTGTATGCGGTGGAGGAGAGAGAGAAGTTGTGCATTGATAAAACTCCATTGCTTTTTTTTAATTATATTTTTTT
CATCATGAGGTTCTTGACGGTTTTTGTCTTGTTTGCTACTCTGTCCCAGACGACACCTACACCAGTGAGAAAAAC
AAAACAAAAAATCCCTTCTATCTCGCTACAGAACCTATCCAATTCTTATAATACCAACTAGCCCGGTATCCCTGC
CGCACCGGCTGCTCGTACGCTCCTAGCCGGACTGCGGGTGGCAAAGTCCGGCTCCGGCTCTGGCTACAGCCGAGC
CAAGTTTCCGCACTGGGAGACGGTTGACGGTGGGTGCAACGTGCGGTGAGTTGTTTTTTTTTAAAAAAAAAGAAG
AAAAAAAAAAGGGGGGACAGACGGAGAGGAAGGGGGGGGGCAAAGGGTGTAGGTGAGGCTGACACGTTTTATACA
GAACCGTCGTCCTCCGACGTGATGGCCGTGGCGTCGTCGTTGATGACGAGTGCGTCGTGACCGATGGTCGCTGGA
CGAGTCCTTACGATGGCGAGACGGTCAACGACGCGTCTGAGATTGACATTGACCACCTGGTGCCACTGAAGAATG
CCTGGATCGTGAGTCCTATCCCTTCTCCCTCTTGCTTAAACAAAGCCCTCCCCAGCCACGTACGTACACACGTAC
AAGACCTAGAAAAAACCGACGACGACGACTAACGCCGTCACACGAGTCCGGCGCCTCGGACTGGGACGCCGACGA
GCGCAGAAGCTTCGCAAACGACGTCGCTAGCCCTCAGCTCTGGGCCGTCACCAGCTCCATCAACCGCGAAAAGAG
CGACGGCTCGCCTGACGAGTGGCTGCCTCCCGTCCAGGCTTTTCGCTGCGTCTATGTCGAGAGCTGGGTTCGCGT
CAAGAGCGCTTACCGCCTTGCCGTCACCAAGGATGAGAAGGAGACTTTGTCGACGGTGCTGGAGTCGTGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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