Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4757
Gene name
Locationscaffold_38:61152..62238
Strand+
Gene length (bp)1086
Transcript length (bp)1032
Coding sequence length (bp)1029
Protein length (aa) 343

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13279 4HBT_2 Thioesterase-like superfamily 6.6E-06 108 209

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P38256|YBU6_YEAST Uncharacterized protein YBR096W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR096W PE=1 SV=1 51 289 4.0E-18

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 53 75 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4757
MASASSKAGGLAVAVKVLVPLAVGSAGYAACRIDWRVAVRSFFTGPGRTSRMLLLLFVVSSWKSMPLVWTYRIFY
TIVYHNALRKSPPFTPRHLFKPMINESRATLLEIDYNLHKSNSTFFSDLDCSRTHLVSYLCRRGLKKLAENRQTA
LVPDPSTGGPARGAMGIMLGSVSCSFKREVAPFAAYELWSRVIAWDRKWMYIVTHFVPKGAARPTEWLDNRCAGL
KTNPAGESVDWDSKLHATALSKYVFKLGRLTVHPAIVLGASGLLPYRPGGWTSGENQLGTGEVGDVDLSIEEREW
DWRRVEAQRIKGMELADHFQALDGMHGLFDGGAGGALGKFGPG
Coding >Ophio5|4757
ATGGCCTCGGCATCTAGCAAGGCCGGCGGCCTGGCCGTCGCCGTCAAGGTGCTCGTACCTCTGGCCGTCGGATCG
GCGGGCTATGCTGCCTGTCGAATCGATTGGCGCGTCGCCGTTCGCTCGTTCTTTACAGGGCCTGGTCGCACTTCG
CGCATGCTGCTGCTGCTCTTCGTCGTCTCCAGCTGGAAGAGTATGCCGCTTGTGTGGACGTATCGCATCTTCTAC
ACAATCGTTTACCACAACGCCCTGCGCAAGTCTCCCCCTTTCACGCCGAGGCATCTCTTCAAGCCCATGATCAAC
GAGAGCCGCGCGACGCTGCTTGAGATCGACTACAATCTGCACAAGTCCAACTCGACCTTCTTCTCCGACCTCGAT
TGCTCAAGAACTCATCTCGTCAGCTATCTCTGCCGTCGCGGCCTCAAAAAGCTAGCGGAAAACCGGCAAACGGCC
CTCGTCCCCGATCCTAGCACCGGCGGCCCCGCCCGCGGCGCCATGGGAATCATGCTGGGATCCGTCTCCTGCAGC
TTCAAGCGTGAGGTCGCGCCCTTTGCCGCCTACGAGCTTTGGAGTCGCGTAATCGCCTGGGATCGCAAGTGGATG
TACATCGTCACACACTTCGTGCCCAAGGGTGCGGCCAGGCCGACTGAATGGCTCGACAACCGCTGCGCCGGCCTC
AAAACGAACCCCGCCGGAGAATCCGTCGACTGGGATAGCAAATTGCACGCGACGGCGTTGAGCAAATACGTCTTC
AAGCTCGGGCGCCTCACCGTTCATCCGGCCATTGTCCTGGGCGCATCAGGTTTACTGCCGTACCGGCCCGGCGGC
TGGACAAGCGGGGAGAATCAGCTCGGAACCGGAGAGGTTGGCGACGTCGACCTCTCCATCGAGGAGCGTGAGTGG
GACTGGCGTCGCGTCGAGGCGCAGCGCATCAAGGGTATGGAGCTGGCCGACCATTTCCAGGCCCTTGACGGCATG
CATGGCTTGTTTGACGGCGGCGCTGGCGGCGCCTTGGGCAAGTTTGGTCCCGGC
Transcript >Ophio5|4757
ATGGCCTCGGCATCTAGCAAGGCCGGCGGCCTGGCCGTCGCCGTCAAGGTGCTCGTACCTCTGGCCGTCGGATCG
GCGGGCTATGCTGCCTGTCGAATCGATTGGCGCGTCGCCGTTCGCTCGTTCTTTACAGGGCCTGGTCGCACTTCG
CGCATGCTGCTGCTGCTCTTCGTCGTCTCCAGCTGGAAGAGTATGCCGCTTGTGTGGACGTATCGCATCTTCTAC
ACAATCGTTTACCACAACGCCCTGCGCAAGTCTCCCCCTTTCACGCCGAGGCATCTCTTCAAGCCCATGATCAAC
GAGAGCCGCGCGACGCTGCTTGAGATCGACTACAATCTGCACAAGTCCAACTCGACCTTCTTCTCCGACCTCGAT
TGCTCAAGAACTCATCTCGTCAGCTATCTCTGCCGTCGCGGCCTCAAAAAGCTAGCGGAAAACCGGCAAACGGCC
CTCGTCCCCGATCCTAGCACCGGCGGCCCCGCCCGCGGCGCCATGGGAATCATGCTGGGATCCGTCTCCTGCAGC
TTCAAGCGTGAGGTCGCGCCCTTTGCCGCCTACGAGCTTTGGAGTCGCGTAATCGCCTGGGATCGCAAGTGGATG
TACATCGTCACACACTTCGTGCCCAAGGGTGCGGCCAGGCCGACTGAATGGCTCGACAACCGCTGCGCCGGCCTC
AAAACGAACCCCGCCGGAGAATCCGTCGACTGGGATAGCAAATTGCACGCGACGGCGTTGAGCAAATACGTCTTC
AAGCTCGGGCGCCTCACCGTTCATCCGGCCATTGTCCTGGGCGCATCAGGTTTACTGCCGTACCGGCCCGGCGGC
TGGACAAGCGGGGAGAATCAGCTCGGAACCGGAGAGGTTGGCGACGTCGACCTCTCCATCGAGGAGCGTGAGTGG
GACTGGCGTCGCGTCGAGGCGCAGCGCATCAAGGGTATGGAGCTGGCCGACCATTTCCAGGCCCTTGACGGCATG
CATGGCTTGTTTGACGGCGGCGCTGGCGGCGCCTTGGGCAAGTTTGGTCCCGGCTGA
Gene >Ophio5|4757
ATGGCCTCGGCATCTAGCAAGGCCGGCGGCCTGGCCGTCGCCGTCAAGGTGCTCGTACCTCTGGCCGTCGGATCG
GCGGGCTATGCTGCCTGTCGAATCGATTGGCGCGTCGCCGTTCGCTCGTTCTTTACAGGGCCTGGTCGCACTTCG
CGCATGCTGCTGCTGCTCTTCGTCGTCTCCAGCTGGAAGAGTATGCCGCTTGTGTGGACGGTATGATTTGCGTCG
AATGCCGTCCATACGATTTCTCGACTAAGGCGCTTCTAGTATCGCATCTTCTACACAATCGTTTACCACAACGCC
CTGCGCAAGTCTCCCCCTTTCACGCCGAGGCATCTCTTCAAGCCCATGATCAACGAGAGCCGCGCGACGCTGCTT
GAGATCGACTACAATCTGCACAAGTCCAACTCGACCTTCTTCTCCGACCTCGATTGCTCAAGAACTCATCTCGTC
AGCTATCTCTGCCGTCGCGGCCTCAAAAAGCTAGCGGAAAACCGGCAAACGGCCCTCGTCCCCGATCCTAGCACC
GGCGGCCCCGCCCGCGGCGCCATGGGAATCATGCTGGGATCCGTCTCCTGCAGCTTCAAGCGTGAGGTCGCGCCC
TTTGCCGCCTACGAGCTTTGGAGTCGCGTAATCGCCTGGGATCGCAAGTGGATGTACATCGTCACACACTTCGTG
CCCAAGGGTGCGGCCAGGCCGACTGAATGGCTCGACAACCGCTGCGCCGGCCTCAAAACGAACCCCGCCGGAGAA
TCCGTCGACTGGGATAGCAAATTGCACGCGACGGCGTTGAGCAAATACGTCTTCAAGCTCGGGCGCCTCACCGTT
CATCCGGCCATTGTCCTGGGCGCATCAGGTTTACTGCCGTACCGGCCCGGCGGCTGGACAAGCGGGGAGAATCAG
CTCGGAACCGGAGAGGTTGGCGACGTCGACCTCTCCATCGAGGAGCGTGAGTGGGACTGGCGTCGCGTCGAGGCG
CAGCGCATCAAGGGTATGGAGCTGGCCGACCATTTCCAGGCCCTTGACGGCATGCATGGCTTGTTTGACGGCGGC
GCTGGCGGCGCCTTGGGCAAGTTTGGTCCCGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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