Protein ID | Ophio5|4756 |
Gene name | |
Location | scaffold_38:59058..60672 |
Strand | + |
Gene length (bp) | 1614 |
Transcript length (bp) | 1614 |
Coding sequence length (bp) | 1611 |
Protein length (aa) | 537 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 50 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 28 | 47 | 19 |
2 | 67 | 89 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 12.43 | 5.20 | 19.66 |
CcL | In ants, during behavior modification | 7.69 | 2.04 | 13.33 |
CcD | In ants, recently dead | 5.99 | 1.98 | 9.99 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.142293 | no |
SC16a | CcD | 0.015527 | yes |
CcL | CcD | 0.517300 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4756 MFRAESVGLPEQTSTCILFFPLPLPSPLRLSGSLSLSLSFSLPLSLIRSNLDGRMADSAGWHVFRNLFLLSLSLA LLPISTTIIAALTVRKRLARRNEPAPSAGRKTVLVTGVGMSKGLFLARMFHRRGHRVIGADCSALSPGRVSVSLD RFYVLPRPERFSVDESRRDPYVLRLLDIVRSEGVNLWVSVSDVSAAAQDALARDLIQDDTTKAKVVQLSLADVQT LHEKDSFMRHVEGLGLPTPDTQVVSNRAAMIDFLLQRGGLRLEAGGAQYLVKPIGVNDQARFNMPLLPLPTEAET MRRIDSVPLDGDSRFVMQEFIRGPEFCTHALVVRGQVRAFVACPSSDLLMHYTALSRDSPLSSKMLAFTKTVAMA GGLEWTGHVSFDFLLRGDQLYPIECNPRVHTAIVLFHDTPQMVDEYLRVLKNTDSSGSEEVLSPNLPRRYYWIGQ DLVEKVISPLYQSLTLRGESPSQLRSSLASFAHHVWCFKDGTFEAWDPWPWWWLYHVYWPLQFLALLARGERWNR LNVSTGKVFKTS |
Coding | >Ophio5|4756 ATGTTCCGTGCGGAATCGGTTGGACTGCCGGAGCAAACGTCAACCTGCATCCTCTTTTTCCCTCTCCCTCTCCCT TCCCCTCTCCGTCTCTCCGGCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCCCTCTCTCTCTAATCCGGTCAAAC CTTGACGGCAGAATGGCCGACTCGGCCGGCTGGCACGTCTTCAGGAACTTGTTTCTCCTTTCCCTCAGCCTGGCA CTGCTGCCAATCAGCACGACCATCATTGCCGCCCTGACGGTGAGAAAGCGACTGGCACGGCGTAATGAGCCGGCC CCAAGCGCCGGCCGCAAGACGGTCCTGGTCACGGGCGTCGGCATGTCCAAAGGCCTCTTCTTAGCCCGAATGTTT CATCGCCGCGGTCATAGGGTTATTGGTGCCGACTGCAGCGCCCTTTCGCCTGGCCGGGTTTCCGTGTCACTTGAC AGATTCTATGTGCTTCCCCGGCCTGAGAGGTTTTCCGTCGACGAGTCCCGTCGTGACCCGTACGTGCTCCGGCTT CTAGACATTGTCCGCAGCGAAGGGGTGAATCTCTGGGTTTCCGTGTCGGACGTCAGCGCCGCCGCTCAAGATGCG CTCGCCAGGGACCTTATCCAAGACGACACCACAAAGGCCAAGGTTGTCCAGCTGAGTCTTGCTGATGTACAGACA TTGCACGAAAAGGACAGCTTCATGCGGCACGTTGAGGGTCTGGGGCTGCCAACACCAGACACTCAGGTCGTCTCC AACAGAGCGGCCATGATTGATTTCCTGCTTCAGAGAGGAGGCCTTCGACTGGAGGCTGGCGGAGCTCAATATCTG GTGAAGCCGATCGGGGTAAACGATCAGGCTCGCTTCAACATGCCTCTGCTGCCGCTTCCGACCGAGGCGGAAACC ATGCGTCGGATCGACTCAGTTCCTCTGGATGGCGATTCTCGTTTCGTCATGCAAGAGTTTATCAGAGGGCCCGAA TTTTGCACTCACGCGCTCGTGGTTCGGGGCCAGGTGCGTGCCTTTGTAGCCTGTCCTTCCTCGGACTTGTTGATG CATTATACCGCTCTGTCTCGAGATTCGCCGCTCAGCAGCAAGATGCTCGCCTTCACCAAGACGGTCGCCATGGCT GGCGGCTTGGAGTGGACGGGCCACGTCAGCTTCGACTTTCTGCTCAGGGGTGACCAACTGTATCCGATCGAGTGC AATCCGAGGGTGCACACAGCCATTGTGCTCTTCCACGACACGCCTCAGATGGTCGACGAGTACCTGAGAGTGCTG AAGAATACGGATTCATCAGGTAGCGAAGAGGTCTTGTCGCCGAATCTGCCGCGGCGGTACTACTGGATCGGCCAA GACTTGGTTGAAAAAGTCATCAGTCCTCTCTATCAGTCTCTCACTTTACGGGGAGAGAGTCCGTCGCAGCTGAGG TCGAGTCTCGCCTCGTTCGCCCACCACGTCTGGTGTTTCAAAGACGGCACTTTTGAGGCGTGGGATCCGTGGCCG TGGTGGTGGCTCTATCATGTGTATTGGCCACTGCAGTTCCTGGCGCTGCTTGCACGAGGAGAGCGATGGAATAGG CTCAATGTTAGCACCGGAAAGGTGTTTAAGACCAGT |
Transcript | >Ophio5|4756 ATGTTCCGTGCGGAATCGGTTGGACTGCCGGAGCAAACGTCAACCTGCATCCTCTTTTTCCCTCTCCCTCTCCCT TCCCCTCTCCGTCTCTCCGGCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCCCTCTCTCTCTAATCCGGTCAAAC CTTGACGGCAGAATGGCCGACTCGGCCGGCTGGCACGTCTTCAGGAACTTGTTTCTCCTTTCCCTCAGCCTGGCA CTGCTGCCAATCAGCACGACCATCATTGCCGCCCTGACGGTGAGAAAGCGACTGGCACGGCGTAATGAGCCGGCC CCAAGCGCCGGCCGCAAGACGGTCCTGGTCACGGGCGTCGGCATGTCCAAAGGCCTCTTCTTAGCCCGAATGTTT CATCGCCGCGGTCATAGGGTTATTGGTGCCGACTGCAGCGCCCTTTCGCCTGGCCGGGTTTCCGTGTCACTTGAC AGATTCTATGTGCTTCCCCGGCCTGAGAGGTTTTCCGTCGACGAGTCCCGTCGTGACCCGTACGTGCTCCGGCTT CTAGACATTGTCCGCAGCGAAGGGGTGAATCTCTGGGTTTCCGTGTCGGACGTCAGCGCCGCCGCTCAAGATGCG CTCGCCAGGGACCTTATCCAAGACGACACCACAAAGGCCAAGGTTGTCCAGCTGAGTCTTGCTGATGTACAGACA TTGCACGAAAAGGACAGCTTCATGCGGCACGTTGAGGGTCTGGGGCTGCCAACACCAGACACTCAGGTCGTCTCC AACAGAGCGGCCATGATTGATTTCCTGCTTCAGAGAGGAGGCCTTCGACTGGAGGCTGGCGGAGCTCAATATCTG GTGAAGCCGATCGGGGTAAACGATCAGGCTCGCTTCAACATGCCTCTGCTGCCGCTTCCGACCGAGGCGGAAACC ATGCGTCGGATCGACTCAGTTCCTCTGGATGGCGATTCTCGTTTCGTCATGCAAGAGTTTATCAGAGGGCCCGAA TTTTGCACTCACGCGCTCGTGGTTCGGGGCCAGGTGCGTGCCTTTGTAGCCTGTCCTTCCTCGGACTTGTTGATG CATTATACCGCTCTGTCTCGAGATTCGCCGCTCAGCAGCAAGATGCTCGCCTTCACCAAGACGGTCGCCATGGCT GGCGGCTTGGAGTGGACGGGCCACGTCAGCTTCGACTTTCTGCTCAGGGGTGACCAACTGTATCCGATCGAGTGC AATCCGAGGGTGCACACAGCCATTGTGCTCTTCCACGACACGCCTCAGATGGTCGACGAGTACCTGAGAGTGCTG AAGAATACGGATTCATCAGGTAGCGAAGAGGTCTTGTCGCCGAATCTGCCGCGGCGGTACTACTGGATCGGCCAA GACTTGGTTGAAAAAGTCATCAGTCCTCTCTATCAGTCTCTCACTTTACGGGGAGAGAGTCCGTCGCAGCTGAGG TCGAGTCTCGCCTCGTTCGCCCACCACGTCTGGTGTTTCAAAGACGGCACTTTTGAGGCGTGGGATCCGTGGCCG TGGTGGTGGCTCTATCATGTGTATTGGCCACTGCAGTTCCTGGCGCTGCTTGCACGAGGAGAGCGATGGAATAGG CTCAATGTTAGCACCGGAAAGGTGTTTAAGACCAGTTGA |
Gene | >Ophio5|4756 ATGTTCCGTGCGGAATCGGTTGGACTGCCGGAGCAAACGTCAACCTGCATCCTCTTTTTCCCTCTCCCTCTCCCT TCCCCTCTCCGTCTCTCCGGCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCCCTCTCTCTCTAATCCGGTCAAAC CTTGACGGCAGAATGGCCGACTCGGCCGGCTGGCACGTCTTCAGGAACTTGTTTCTCCTTTCCCTCAGCCTGGCA CTGCTGCCAATCAGCACGACCATCATTGCCGCCCTGACGGTGAGAAAGCGACTGGCACGGCGTAATGAGCCGGCC CCAAGCGCCGGCCGCAAGACGGTCCTGGTCACGGGCGTCGGCATGTCCAAAGGCCTCTTCTTAGCCCGAATGTTT CATCGCCGCGGTCATAGGGTTATTGGTGCCGACTGCAGCGCCCTTTCGCCTGGCCGGGTTTCCGTGTCACTTGAC AGATTCTATGTGCTTCCCCGGCCTGAGAGGTTTTCCGTCGACGAGTCCCGTCGTGACCCGTACGTGCTCCGGCTT CTAGACATTGTCCGCAGCGAAGGGGTGAATCTCTGGGTTTCCGTGTCGGACGTCAGCGCCGCCGCTCAAGATGCG CTCGCCAGGGACCTTATCCAAGACGACACCACAAAGGCCAAGGTTGTCCAGCTGAGTCTTGCTGATGTACAGACA TTGCACGAAAAGGACAGCTTCATGCGGCACGTTGAGGGTCTGGGGCTGCCAACACCAGACACTCAGGTCGTCTCC AACAGAGCGGCCATGATTGATTTCCTGCTTCAGAGAGGAGGCCTTCGACTGGAGGCTGGCGGAGCTCAATATCTG GTGAAGCCGATCGGGGTAAACGATCAGGCTCGCTTCAACATGCCTCTGCTGCCGCTTCCGACCGAGGCGGAAACC ATGCGTCGGATCGACTCAGTTCCTCTGGATGGCGATTCTCGTTTCGTCATGCAAGAGTTTATCAGAGGGCCCGAA TTTTGCACTCACGCGCTCGTGGTTCGGGGCCAGGTGCGTGCCTTTGTAGCCTGTCCTTCCTCGGACTTGTTGATG CATTATACCGCTCTGTCTCGAGATTCGCCGCTCAGCAGCAAGATGCTCGCCTTCACCAAGACGGTCGCCATGGCT GGCGGCTTGGAGTGGACGGGCCACGTCAGCTTCGACTTTCTGCTCAGGGGTGACCAACTGTATCCGATCGAGTGC AATCCGAGGGTGCACACAGCCATTGTGCTCTTCCACGACACGCCTCAGATGGTCGACGAGTACCTGAGAGTGCTG AAGAATACGGATTCATCAGGTAGCGAAGAGGTCTTGTCGCCGAATCTGCCGCGGCGGTACTACTGGATCGGCCAA GACTTGGTTGAAAAAGTCATCAGTCCTCTCTATCAGTCTCTCACTTTACGGGGAGAGAGTCCGTCGCAGCTGAGG TCGAGTCTCGCCTCGTTCGCCCACCACGTCTGGTGTTTCAAAGACGGCACTTTTGAGGCGTGGGATCCGTGGCCG TGGTGGTGGCTCTATCATGTGTATTGGCCACTGCAGTTCCTGGCGCTGCTTGCACGAGGAGAGCGATGGAATAGG CTCAATGTTAGCACCGGAAAGGTGTTTAAGACCAGTTGA |