Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4749
Gene name
Locationscaffold_38:44744..46108
Strand+
Gene length (bp)1364
Transcript length (bp)1233
Coding sequence length (bp)1230
Protein length (aa) 410

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06687 SUR7 SUR7/PalI family 8.7E-17 14 351

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005886 plasma membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0016020 membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 9 31 22
2 256 278 22
3 285 307 22
4 332 354 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4749
MWSKSSKLILSISVIIVAVLAFISSVLTAVTLSAGVKPNSIEELAILKVDLSRVNAGRGLLPSGGGDVVENVGKG
AAELGKTLSDIFTGLADGSSATASSTLERRSSRSSRGTGEDGGGRESRGSRGRGGNRTDRNDRTGRDTTRDTTRD
TTRDTTRDARDTARDSARSGRGGLPQYVSLHVQTICNGDFGGNIGANSQVRVKTCTKPGRRLKDVGEVVGVANPI
AGLTSRVLPTVVKETMQLSVDTVNSIQVLLTVVFAIGTVFSFLSLLLIVVSFFFPRMKMLIYANFIVAAIAAGFV
SGAFIGADIIVSLVAYRTNRIFKDFNVHAELGSTFLGVSVAATIFSIAVFLYWIGRVVLLFRETIFAKVPGLSKL
RGLINKKKVTDEEPAVTDETAAKKAKKASSPGGFF
Coding >Ophio5|4749
ATGTGGTCGAAATCTTCGAAACTCATTTTGTCGATTTCCGTCATCATCGTCGCCGTCTTGGCCTTTATCAGTTCC
GTCTTGACAGCGGTGACGTTGTCTGCGGGCGTCAAGCCTAATTCCATCGAGGAACTCGCCATACTCAAGGTCGAC
TTATCCCGCGTGAATGCAGGCCGGGGTTTACTTCCTTCCGGCGGCGGCGATGTGGTGGAAAATGTCGGCAAAGGC
GCAGCCGAACTGGGCAAGACCTTATCTGACATCTTCACCGGTCTCGCCGACGGTTCTTCAGCCACGGCCAGTAGC
ACTTTGGAACGGAGATCGTCAAGATCATCTCGAGGCACTGGGGAAGACGGGGGAGGCAGGGAGAGTAGGGGCAGC
AGGGGAAGGGGGGGTAACAGGACTGACAGGAATGACAGGACCGGCAGGGACACCACCAGAGACACCACCAGAGAC
ACCACCAGGGACACCACCAGGGACGCCAGGGACACCGCCAGGGACAGCGCGAGGTCCGGCCGGGGCGGCTTGCCG
CAATACGTTTCACTTCATGTGCAGACCATCTGCAACGGAGACTTTGGCGGCAACATCGGAGCGAATTCCCAAGTC
CGAGTCAAGACCTGCACAAAGCCAGGCCGCCGTCTGAAGGATGTTGGCGAGGTCGTCGGCGTCGCCAACCCCATA
GCGGGACTTACATCGCGGGTTTTGCCCACGGTAGTCAAGGAGACGATGCAGCTGTCCGTCGATACCGTCAATTCC
ATCCAGGTGCTCCTCACCGTCGTCTTCGCCATCGGGACCGTCTTCAGCTTCCTCTCGCTGCTGCTCATCGTCGTC
AGCTTCTTCTTCCCGCGCATGAAGATGCTCATATACGCCAATTTTATCGTCGCCGCAATCGCCGCCGGATTTGTC
TCAGGGGCTTTCATTGGCGCCGATATCATCGTCAGTCTTGTGGCGTACAGAACCAACCGGATTTTCAAGGACTTT
AACGTCCACGCTGAATTGGGCTCGACCTTTCTTGGAGTCAGCGTCGCGGCCACTATTTTTTCCATTGCCGTCTTT
CTCTACTGGATCGGGAGGGTAGTGCTCCTGTTCCGAGAGACAATCTTCGCCAAGGTCCCGGGTCTATCCAAGCTT
CGGGGCTTGATCAACAAGAAAAAGGTGACGGATGAAGAGCCAGCTGTCACAGATGAAACGGCGGCAAAGAAGGCA
AAGAAGGCGTCTAGTCCAGGCGGATTCTTT
Transcript >Ophio5|4749
ATGTGGTCGAAATCTTCGAAACTCATTTTGTCGATTTCCGTCATCATCGTCGCCGTCTTGGCCTTTATCAGTTCC
GTCTTGACAGCGGTGACGTTGTCTGCGGGCGTCAAGCCTAATTCCATCGAGGAACTCGCCATACTCAAGGTCGAC
TTATCCCGCGTGAATGCAGGCCGGGGTTTACTTCCTTCCGGCGGCGGCGATGTGGTGGAAAATGTCGGCAAAGGC
GCAGCCGAACTGGGCAAGACCTTATCTGACATCTTCACCGGTCTCGCCGACGGTTCTTCAGCCACGGCCAGTAGC
ACTTTGGAACGGAGATCGTCAAGATCATCTCGAGGCACTGGGGAAGACGGGGGAGGCAGGGAGAGTAGGGGCAGC
AGGGGAAGGGGGGGTAACAGGACTGACAGGAATGACAGGACCGGCAGGGACACCACCAGAGACACCACCAGAGAC
ACCACCAGGGACACCACCAGGGACGCCAGGGACACCGCCAGGGACAGCGCGAGGTCCGGCCGGGGCGGCTTGCCG
CAATACGTTTCACTTCATGTGCAGACCATCTGCAACGGAGACTTTGGCGGCAACATCGGAGCGAATTCCCAAGTC
CGAGTCAAGACCTGCACAAAGCCAGGCCGCCGTCTGAAGGATGTTGGCGAGGTCGTCGGCGTCGCCAACCCCATA
GCGGGACTTACATCGCGGGTTTTGCCCACGGTAGTCAAGGAGACGATGCAGCTGTCCGTCGATACCGTCAATTCC
ATCCAGGTGCTCCTCACCGTCGTCTTCGCCATCGGGACCGTCTTCAGCTTCCTCTCGCTGCTGCTCATCGTCGTC
AGCTTCTTCTTCCCGCGCATGAAGATGCTCATATACGCCAATTTTATCGTCGCCGCAATCGCCGCCGGATTTGTC
TCAGGGGCTTTCATTGGCGCCGATATCATCGTCAGTCTTGTGGCGTACAGAACCAACCGGATTTTCAAGGACTTT
AACGTCCACGCTGAATTGGGCTCGACCTTTCTTGGAGTCAGCGTCGCGGCCACTATTTTTTCCATTGCCGTCTTT
CTCTACTGGATCGGGAGGGTAGTGCTCCTGTTCCGAGAGACAATCTTCGCCAAGGTCCCGGGTCTATCCAAGCTT
CGGGGCTTGATCAACAAGAAAAAGGTGACGGATGAAGAGCCAGCTGTCACAGATGAAACGGCGGCAAAGAAGGCA
AAGAAGGCGTCTAGTCCAGGCGGATTCTTTTGA
Gene >Ophio5|4749
ATGTGGTCGAAATCTTCGAAACTCATTTTGTCGATTTCCGTCATCATCGTCGCCGTCTTGGCCTTTATCAGTTCC
GTCTTGACAGCGGTGACGTTGTCTGCGGGCGTCAAGCCTAATTCCATCGAGGAACTCGCCATACTCAAGGTACGA
CACAACTACCAAATCTGGAGAAGAAGGGGATGCTGACAGATTGACACAAAGGTCGACTTATCCCGCGTGAATGCA
GGCCGGGGTTTACTTCCTTCCGGCGGCGGCGATGTGGTGGAAAATGTCGGCAAAGGCGCAGCCGAACTGGGCAAG
ACCTTATCTGACATCTTCACCGGTCTCGCCGACGGTTCTTCAGCCACGGCCAGTAGCACTTTGGAACGGAGATCG
TCAAGATCATCTCGAGGCACTGGGGAAGACGGGGGAGGCAGGGAGAGTAGGGGCAGCAGGGGAAGGGGGGGTAAC
AGGACTGACAGGAATGACAGGACCGGCAGGGACACCACCAGAGACACCACCAGAGACACCACCAGGGACACCACC
AGGGACGCCAGGGACACCGCCAGGGACAGCGCGAGGTCCGGCCGGGGCGGCTTGCCGCAATACGTTTCACTTCAT
GTGCAGACCATCTGCAACGGAGACTTTGGCGGCAACATCGGAGCGAATTCCCAAGTCCGAGTCAAGACCTGCACA
AAGCCAGGCCGTAAGCCTCCTTTTCTCCCCTCCCGCTCACACCACCCTTGGCTCGACGCCCAGGCTGACACCCCT
TTCTCGCAGGCCGTCTGAAGGATGTTGGCGAGGTCGTCGGCGTCGCCAACCCCATAGCGGGACTTACATCGCGGG
TTTTGCCCACGGTAGTCAAGGAGACGATGCAGCTGTCCGTCGATACCGTCAATTCCATCCAGGTGCTCCTCACCG
TCGTCTTCGCCATCGGGACCGTCTTCAGCTTCCTCTCGCTGCTGCTCATCGTCGTCAGCTTCTTCTTCCCGCGCA
TGAAGATGCTCATATACGCCAATTTTATCGTCGCCGCAATCGCCGCCGGATTTGTCTCAGGGGCTTTCATTGGCG
CCGATATCATCGTCAGTCTTGTGGCGTACAGAACCAACCGGATTTTCAAGGACTTTAACGTCCACGCTGAATTGG
GCTCGACCTTTCTTGGAGTCAGCGTCGCGGCCACTATTTTTTCCATTGCCGTCTTTCTCTACTGGATCGGGAGGG
TAGTGCTCCTGTTCCGAGAGACAATCTTCGCCAAGGTCCCGGGTCTATCCAAGCTTCGGGGCTTGATCAACAAGA
AAAAGGTGACGGATGAAGAGCCAGCTGTCACAGATGAAACGGCGGCAAAGAAGGCAAAGAAGGCGTCTAGTCCAG
GCGGATTCTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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