Protein ID | Ophio5|4746 |
Gene name | |
Location | scaffold_38:24561..27164 |
Strand | + |
Gene length (bp) | 2603 |
Transcript length (bp) | 2238 |
Coding sequence length (bp) | 2235 |
Protein length (aa) | 745 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1717 | 0.088 | 0.829 | 0.1657 | 0.0654 | 0.1121 | 0.5245 | 0.4557 | 0.4289 | 0.007 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 27 | 0.999723 |
Orthofinder run ID | 4 |
Orthogroup | 28 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4746 MAMSQLWSALVLAFTTSLLLWPGSSDAQPPPPPRFRYSMETAEFVYILIPGVLDVTPAMFRHRGGIFMADDMTFD HDEAYGYDNMGDHYAYTPVSTSIDETISGLYMSRRGWWLYRITASLNMMPRYTNGRGYSHAALGGVPWTMVHSFT VFLGNEQPRAFVWQDNADYDPRWEAFGLSGPQPLLSGRGVPEGTTLRELAVSFMNGLTGPQNQLFNDSSLQTLRE LFDWDVQAEPNRNFPLLRRFQPMSLVSASLAHLNWNQVTTIPPRLRLVLAGGLPTRSQCALALGAPGLGPSGFKR KRSEEESCQKLATLVQDKYGLAMVVQDKYGLATEDGERNTTRRLPRPEDMVKVDAAIVLMCKNDNFNPPCIKFET PPGECVPVPDEYLETVSAVLPNKTAGSCHIYTGLDCTGTTIEIQHSVPLSLWDEPLKPFNDQIGSIRCDGAYQPA EAVERWEWSPETMKEHCSHFDQLRLHFNLSSDRGSGTYDKLWLAFPGAPNMHPIVDGPPAGFEEWQTINLQEVFM SSRVEVAGLKSIGIAGTASFPTALFAMDEFTIAGIKLSARCAGSGIMVDNNKYLSLEKSLKVGDRFGEAQKGATY ALWEGGIGPEDWVAKPPCSHFEQLSLTLEVADESWAGTSNDLHALVGSGKFHLASHPSRREVFSIDMNLEEAFGS KVVKVGQISSLAIRSEGGHDQALLHSVTMRAICAGRGKSVMVETEVDKWIADGTQWSHQLEPEMWTEIQV |
Coding | >Ophio5|4746 ATGGCCATGAGTCAGTTGTGGTCTGCCTTAGTTCTGGCATTTACCACGTCTTTACTCCTATGGCCCGGAAGCAGC GATGCACAACCGCCGCCACCCCCTCGATTCCGATATTCTATGGAAACGGCTGAATTCGTCTACATACTTATACCC GGGGTTCTAGACGTAACTCCGGCAATGTTCAGACATCGGGGCGGAATTTTTATGGCGGATGACATGACTTTCGAC CATGATGAGGCATATGGCTATGACAACATGGGGGATCATTATGCCTACACACCCGTCAGCACCAGTATTGACGAA ACCATCTCTGGCCTCTACATGTCCAGACGCGGCTGGTGGTTGTATAGGATTACCGCATCGCTGAACATGATGCCT CGATATACAAATGGTCGCGGCTATTCGCATGCGGCTCTAGGAGGCGTTCCGTGGACCATGGTTCACTCGTTTACC GTCTTTCTCGGGAATGAGCAGCCCCGGGCATTCGTTTGGCAAGATAATGCCGACTACGACCCCAGATGGGAGGCT TTCGGTCTGAGCGGCCCGCAGCCGTTACTCTCCGGTCGTGGGGTGCCCGAGGGGACGACGTTGCGCGAACTGGCG GTTTCCTTTATGAATGGACTTACGGGACCGCAGAATCAGCTCTTCAACGACAGCAGTCTCCAAACGCTTCGAGAG CTGTTCGACTGGGACGTCCAAGCTGAGCCCAACCGCAATTTCCCCTTGCTTCGCCGTTTCCAACCCATGTCTCTT GTTTCCGCTTCGCTCGCACACCTCAACTGGAATCAGGTCACCACCATTCCGCCTCGACTACGGCTGGTACTGGCA GGCGGGCTTCCCACCCGTTCGCAGTGTGCCTTGGCACTTGGCGCCCCGGGGCTTGGCCCTTCCGGGTTCAAGCGC AAGCGAAGCGAAGAAGAAAGTTGCCAGAAACTGGCCACTCTCGTACAAGACAAGTATGGACTCGCGATGGTCGTA CAAGACAAGTATGGACTCGCGACGGAGGATGGCGAACGCAACACCACTCGACGCCTCCCTAGGCCAGAGGATATG GTAAAGGTAGACGCAGCTATCGTCTTAATGTGCAAGAACGACAATTTCAATCCTCCCTGTATCAAGTTCGAAACC CCTCCCGGGGAATGCGTTCCTGTACCCGACGAATATCTCGAGACCGTGTCCGCGGTGCTACCAAACAAAACCGCC GGAAGCTGCCACATTTACACAGGGCTTGACTGCACTGGCACCACGATAGAGATTCAACACTCGGTTCCGCTTTCT CTCTGGGACGAGCCTCTGAAACCATTCAACGACCAAATCGGGTCCATTCGTTGTGACGGTGCTTATCAGCCAGCA GAAGCAGTCGAACGGTGGGAATGGTCCCCCGAAACCATGAAGGAGCACTGCAGCCACTTTGATCAACTGCGTCTC CATTTCAATCTGTCGTCAGATAGAGGGTCCGGAACGTACGACAAATTGTGGTTGGCATTTCCCGGTGCTCCCAAT ATGCACCCGATCGTAGACGGCCCTCCAGCCGGGTTTGAGGAGTGGCAGACCATTAATCTACAGGAAGTCTTCATG TCATCACGGGTGGAAGTGGCAGGTCTCAAGTCCATCGGCATCGCTGGAACGGCCTCGTTTCCGACGGCTTTGTTT GCCATGGATGAGTTTACGATTGCTGGCATCAAGCTCTCAGCACGTTGCGCTGGCTCGGGCATCATGGTGGACAAT AACAAATATCTCTCTCTCGAGAAATCACTCAAGGTCGGCGACCGCTTTGGTGAGGCGCAAAAGGGGGCGACATAT GCTCTCTGGGAGGGCGGCATCGGACCTGAAGACTGGGTTGCAAAGCCGCCTTGCAGCCACTTTGAGCAACTATCG CTCACGCTTGAAGTAGCCGACGAGTCCTGGGCGGGAACGTCCAACGATCTCCATGCACTTGTCGGCTCGGGCAAG TTCCATCTCGCATCGCACCCTTCTCGACGCGAAGTATTCAGCATTGATATGAATCTTGAGGAAGCCTTCGGCTCA AAGGTCGTCAAGGTCGGCCAGATCAGCTCCTTGGCCATTCGCAGTGAAGGCGGGCATGACCAGGCGTTGCTTCAC AGCGTGACGATGAGGGCAATTTGCGCTGGCCGGGGCAAGTCAGTCATGGTTGAGACGGAAGTCGACAAATGGATT GCCGACGGCACTCAATGGTCTCACCAGCTGGAGCCTGAGATGTGGACAGAAATCCAGGTT |
Transcript | >Ophio5|4746 ATGGCCATGAGTCAGTTGTGGTCTGCCTTAGTTCTGGCATTTACCACGTCTTTACTCCTATGGCCCGGAAGCAGC GATGCACAACCGCCGCCACCCCCTCGATTCCGATATTCTATGGAAACGGCTGAATTCGTCTACATACTTATACCC GGGGTTCTAGACGTAACTCCGGCAATGTTCAGACATCGGGGCGGAATTTTTATGGCGGATGACATGACTTTCGAC CATGATGAGGCATATGGCTATGACAACATGGGGGATCATTATGCCTACACACCCGTCAGCACCAGTATTGACGAA ACCATCTCTGGCCTCTACATGTCCAGACGCGGCTGGTGGTTGTATAGGATTACCGCATCGCTGAACATGATGCCT CGATATACAAATGGTCGCGGCTATTCGCATGCGGCTCTAGGAGGCGTTCCGTGGACCATGGTTCACTCGTTTACC GTCTTTCTCGGGAATGAGCAGCCCCGGGCATTCGTTTGGCAAGATAATGCCGACTACGACCCCAGATGGGAGGCT TTCGGTCTGAGCGGCCCGCAGCCGTTACTCTCCGGTCGTGGGGTGCCCGAGGGGACGACGTTGCGCGAACTGGCG GTTTCCTTTATGAATGGACTTACGGGACCGCAGAATCAGCTCTTCAACGACAGCAGTCTCCAAACGCTTCGAGAG CTGTTCGACTGGGACGTCCAAGCTGAGCCCAACCGCAATTTCCCCTTGCTTCGCCGTTTCCAACCCATGTCTCTT GTTTCCGCTTCGCTCGCACACCTCAACTGGAATCAGGTCACCACCATTCCGCCTCGACTACGGCTGGTACTGGCA GGCGGGCTTCCCACCCGTTCGCAGTGTGCCTTGGCACTTGGCGCCCCGGGGCTTGGCCCTTCCGGGTTCAAGCGC AAGCGAAGCGAAGAAGAAAGTTGCCAGAAACTGGCCACTCTCGTACAAGACAAGTATGGACTCGCGATGGTCGTA CAAGACAAGTATGGACTCGCGACGGAGGATGGCGAACGCAACACCACTCGACGCCTCCCTAGGCCAGAGGATATG GTAAAGGTAGACGCAGCTATCGTCTTAATGTGCAAGAACGACAATTTCAATCCTCCCTGTATCAAGTTCGAAACC CCTCCCGGGGAATGCGTTCCTGTACCCGACGAATATCTCGAGACCGTGTCCGCGGTGCTACCAAACAAAACCGCC GGAAGCTGCCACATTTACACAGGGCTTGACTGCACTGGCACCACGATAGAGATTCAACACTCGGTTCCGCTTTCT CTCTGGGACGAGCCTCTGAAACCATTCAACGACCAAATCGGGTCCATTCGTTGTGACGGTGCTTATCAGCCAGCA GAAGCAGTCGAACGGTGGGAATGGTCCCCCGAAACCATGAAGGAGCACTGCAGCCACTTTGATCAACTGCGTCTC CATTTCAATCTGTCGTCAGATAGAGGGTCCGGAACGTACGACAAATTGTGGTTGGCATTTCCCGGTGCTCCCAAT ATGCACCCGATCGTAGACGGCCCTCCAGCCGGGTTTGAGGAGTGGCAGACCATTAATCTACAGGAAGTCTTCATG TCATCACGGGTGGAAGTGGCAGGTCTCAAGTCCATCGGCATCGCTGGAACGGCCTCGTTTCCGACGGCTTTGTTT GCCATGGATGAGTTTACGATTGCTGGCATCAAGCTCTCAGCACGTTGCGCTGGCTCGGGCATCATGGTGGACAAT AACAAATATCTCTCTCTCGAGAAATCACTCAAGGTCGGCGACCGCTTTGGTGAGGCGCAAAAGGGGGCGACATAT GCTCTCTGGGAGGGCGGCATCGGACCTGAAGACTGGGTTGCAAAGCCGCCTTGCAGCCACTTTGAGCAACTATCG CTCACGCTTGAAGTAGCCGACGAGTCCTGGGCGGGAACGTCCAACGATCTCCATGCACTTGTCGGCTCGGGCAAG TTCCATCTCGCATCGCACCCTTCTCGACGCGAAGTATTCAGCATTGATATGAATCTTGAGGAAGCCTTCGGCTCA AAGGTCGTCAAGGTCGGCCAGATCAGCTCCTTGGCCATTCGCAGTGAAGGCGGGCATGACCAGGCGTTGCTTCAC AGCGTGACGATGAGGGCAATTTGCGCTGGCCGGGGCAAGTCAGTCATGGTTGAGACGGAAGTCGACAAATGGATT GCCGACGGCACTCAATGGTCTCACCAGCTGGAGCCTGAGATGTGGACAGAAATCCAGGTTTAG |
Gene | >Ophio5|4746 ATGGCCATGAGTCAGTTGTGGTCTGCCTTAGTTCTGGCATTTACCACGTCTTTACTCCTATGGCCCGGAAGCAGC GATGCACAACCGCCGCCACCCCCTCGATTCCGATATTCTATGGAAACGGCTGAATTCGTCTACATACTTATACCC GGGGTTCTAGACGTAACTCCGGCAATGTTCAGACATCGGGGCGGAATTTTTATGGCGGATGACATGACTTTCGAC CATGATGAGGCATATGGCTATGACAACATGGGGGATCATTATGCCTACACACCCGTCAGCACCAGTATTGACGAA ACCATCTCTGGCCTCTACATGTCCAGACGCGGCTGGTGGTTGTATAGGATTACCGCATCGCTGAACATGATGCCT CGATATACAAATGGTCGCGGCTATTCGCATGCGGCTCTAGGAGGCGTTCCGTGGACCATGGTTCACTCGTTTACC GTCTTTCTCGGGAATGAGCAGCCCCGGGCATTCGTTTGGCAAGATAATGCCGACTACGACCCCAGATGGGAGGCT TTCGGTCTGAGCGGCCCGCAGCCGTTACTCTCCGGTCGTGGGGTGCCCGAGGGGACGACGTTGCGCGAACTGGCG GTTTCCTTTATGAATGGACTTACGGGACCGCAGAATCAGCTCTTCAACGACAGCAGTCTCCAAACGCTTCGAGAG CTGTTCGACTGGGACGTCCAAGCTGAGCCCAACCGCAATTTCCCCTTGCTTCGCCGTTTCCAACGTGGGTGATCT CCTTTGGGGGGGGGGGGGGTTGTTTTTGGTATGGCATGGAACTGACCGTCGTAGCCATGTCTCTTGTTTCCGCTT CGCTCGCACACCTCAACTGGAATCAGGTCACCACCATTCCGCCTCGACTACGGCTGGTACTGGCAGGCGGGCTTC CCACCCGTTCGCAGTGTGCCTTGGCACTTGGCGCCCCGGGGCTTGGCCCTTCCGGGTTCAAGCGCAAGCGAAGCG AAGAAGAAAGTTGCCAGAAACTGGCCACTCTCGTACAAGACAAGTATGGACTCGCGATGGTCGTACAAGACAAGT ATGGACTCGCGACGGAGGATGGCGAACGCAACACCAGTAAGTTAGCTCGACGAGGAGCAGGCCACGTCTAACGCT ACCGCAGCTCGACGCCTCCCTAGGCCAGAGGATATGGTAAAGGTAGACGCAGCTATCGTCTTAATGTGCAAGAAC GACAATTTCAATCCTCCCTGTATCAAGTTCGAAACCCCTCCCGGGGAATGCGGTATGGTATCGAGCCGGCTGTCA ACGGGCTTTGGCTGATGGGTTGTTCCCCAAGTTCCTGTACCCGACGAATATCTCGAGACCGTGTCCGCGGTGCTA CCAAACAAAACCGCCGGAAGCTGCCACATTTACACGTGAGTGAGCCTTGTTTCCCCCCCCCTTCTTTTCCTGGTT GGGCAGATGGGAACGCAGAGGTTAAGCGGGCTGAGAAACAGAGGGCTTGACTGCACTGGCACCACGATAGAGATT CAACACTCGGTTCCGCTTTCTCTCTGGGACGAGCCTCTGAAACCATTCAACGACCAAATCGGGTCCATTCGTTGT GACGGTGCTTATCAGCCAGCAGAAGCAGTCGAACGGTGGGAATGGTCCCCCGAAACCATGAAGGAGCACTGCAGC CACTTTGATCAACTGCGTCTCCATTTCAATCTGTCGTCAGATAGAGGGTCCGGAACGTACGACAAATTGTGGTTG GCATTTCCCGGTGCTCCCAATATGCACCCGATCGTAGACGGCCCTCCAGCCGGGTTTGAGGAGTGGCAGACCATT AATCTACAGGAAGTCTTCATGTCATCACGGGTGGAAGTGGCAGGTCTCAAGTCCATCGGCATCGCTGGAACGGCC TCGTTTCCGACGGCTTTGTTTGCCATGGATGAGTTTACGATTGCTGGTATGAAGCCTCCCTTGCAGAAGACCAAA GAGAGAGAGAGAGAGAGAATGACGGGTCGCATTCTAGGCATCAAGCTCTCAGCACGTTGCGCTGGCTCGGGCATC ATGGTGGACAATAACAAATATCTCTCTCTCGAGAAATCACTCAAGGTCGGCGACCGCTTTGGTGAGGCGCAAAAG GGGGCGACATATGCTCTCTGGGAGGGCGGCATCGGACCTGAAGACTGGGTTGCAAAGCCGCCTTGCAGCCACTTT GAGCAACTATCGCTCACGCTTGAAGTAGCCGACGAGTCCTGGGCGGGAACGTCCAACGATCTCCATGCACTTGTC GGCTCGGGCAAGTTCCATCTCGCATCGCACCCTTCTCGACGCGAAGTATTCAGCATTGATATGAATCTTGAGGAA GCCTTCGGCTCAAAGGTCGTCAAGGTCGGCCAGATCAGCTCCTTGGCCATTCGCAGTGAAGGCGGGCATGACCAG GCGTTGCTTCACAGTAAGTCATTTGTCACTCCATCTCCCAAGCTCTGACGATTAACGGAAAAAAAGGCGTGACGA TGAGGGCAATTTGCGCTGGCCGGGGCAAGTCAGTCATGGTTGAGACGGAAGTCGACAAATGGATTGCCGACGGCA CTCAATGGTCTCACCAGCTGGAGCCTGAGATGTGGACAGAAATCCAGGTTTAG |