Protein ID | Ophio5|4730 |
Gene name | |
Location | scaffold_379:225..1421 |
Strand | + |
Gene length (bp) | 1196 |
Transcript length (bp) | 1134 |
Coding sequence length (bp) | 1131 |
Protein length (aa) | 377 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00722 | Glyco_hydro_16 | Glycosyl hydrolases family 16 | 5.5E-40 | 69 | 226 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4ALQ5|CRH11_ARTBC | Probable extracellular glycosidase ARB_05253 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05253 PE=1 SV=2 | 25 | 274 | 3.0E-79 |
sp|Q8J0P4|CRF1_ASPFU | Probable glycosidase crf1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=crf1 PE=1 SV=2 | 22 | 270 | 6.0E-73 |
sp|P53301|CRH1_YEAST | Probable glycosidase CRH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CRH1 PE=1 SV=1 | 30 | 279 | 4.0E-71 |
sp|Q5AFA2|CRH11_CANAL | Extracellular glycosidase CRH11 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CRH11 PE=1 SV=1 | 8 | 279 | 6.0E-71 |
sp|D4B4J2|CRH12_ARTBC | Probable extracellular glycosidase ARB_03382 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03382 PE=3 SV=2 | 12 | 272 | 1.0E-63 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4ALQ5|CRH11_ARTBC | Probable extracellular glycosidase ARB_05253 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05253 PE=1 SV=2 | 25 | 274 | 3.0E-79 |
sp|Q8J0P4|CRF1_ASPFU | Probable glycosidase crf1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=crf1 PE=1 SV=2 | 22 | 270 | 6.0E-73 |
sp|P53301|CRH1_YEAST | Probable glycosidase CRH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CRH1 PE=1 SV=1 | 30 | 279 | 4.0E-71 |
sp|Q5AFA2|CRH11_CANAL | Extracellular glycosidase CRH11 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CRH11 PE=1 SV=1 | 8 | 279 | 6.0E-71 |
sp|D4B4J2|CRH12_ARTBC | Probable extracellular glycosidase ARB_03382 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03382 PE=3 SV=2 | 12 | 272 | 1.0E-63 |
sp|Q5AK54|CRH12_CANAL | Extracellular glycosidase CRH12 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CRH12 PE=1 SV=1 | 1 | 256 | 1.0E-46 |
sp|Q4WI46|CRF2_ASPFU | Probable glycosidase crf2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=crf1 PE=1 SV=1 | 56 | 267 | 1.0E-27 |
sp|Q05790|CRR1_YEAST | Probable glycosidase CRR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CRR1 PE=2 SV=1 | 92 | 259 | 4.0E-27 |
sp|Q75A41|CRR1_ASHGO | Probable glycosidase CRR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CRR1 PE=3 SV=1 | 92 | 249 | 3.0E-23 |
sp|Q5AJC0|UTR2_CANAL | Extracellular glycosidase UTR2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UTR2 PE=1 SV=1 | 91 | 227 | 7.0E-19 |
sp|P32623|CRH2_YEAST | Probable glycosidase CRH2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UTR2 PE=1 SV=3 | 92 | 248 | 2.0E-17 |
sp|P24806|XTH24_ARATH | Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2 | 93 | 269 | 5.0E-15 |
sp|Q38907|XTH25_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2 | 93 | 243 | 1.0E-13 |
sp|Q9FKL9|XTH12_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1 | 93 | 247 | 1.0E-12 |
sp|O80803|XTH17_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=1 SV=1 | 92 | 245 | 3.0E-12 |
sp|P35694|XTH2_SOYBN | Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine max PE=2 SV=1 | 93 | 248 | 1.0E-11 |
sp|Q38857|XTH22_ARATH | Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1 | 93 | 241 | 1.0E-11 |
sp|Q9M0D1|XTH19_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1 | 92 | 245 | 4.0E-11 |
sp|Q9FI31|XTH20_ARATH | Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1 | 92 | 245 | 4.0E-11 |
sp|Q38911|XTH15_ARATH | Xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1 | 93 | 241 | 7.0E-11 |
sp|Q9FKL8|XTH13_ARATH | Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=3 SV=1 | 93 | 247 | 8.0E-11 |
sp|Q8LG58|XTH16_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2 | 93 | 241 | 2.0E-10 |
sp|Q9ZV40|XTH21_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1 | 93 | 236 | 4.0E-10 |
sp|Q9SVV2|XTH26_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1 | 93 | 276 | 5.0E-10 |
sp|Q8L7H3|XTH29_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1 | 99 | 245 | 9.0E-10 |
sp|Q9ZSU4|XTH14_ARATH | Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1 | 93 | 243 | 2.0E-09 |
sp|Q8LF99|XTH6_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2 | 93 | 245 | 7.0E-09 |
sp|Q8LER3|XTH7_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2 | 93 | 245 | 2.0E-08 |
sp|Q9ZVK1|XTH10_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1 | 51 | 236 | 7.0E-08 |
sp|P27051|GUB_BACLI | Beta-glucanase OS=Bacillus licheniformis GN=bg1 PE=1 SV=1 | 11 | 211 | 7.0E-08 |
sp|Q9SV61|XTH1_ARATH | Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=3 SV=2 | 95 | 215 | 2.0E-07 |
sp|Q38908|XTH30_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2 | 99 | 215 | 3.0E-07 |
sp|Q76BW5|XTH8_ORYSJ | Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1 | 93 | 211 | 3.0E-07 |
sp|P07980|GUB_BACAM | Beta-glucanase OS=Bacillus amyloliquefaciens GN=bglA PE=3 SV=1 | 94 | 211 | 7.0E-07 |
sp|Q9LJR7|XTH3_ARATH | Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1 | 95 | 246 | 7.0E-07 |
sp|Q53317|XYND_RUMFL | Xylanase/beta-glucanase OS=Ruminococcus flavefaciens GN=xynD PE=3 SV=2 | 91 | 211 | 9.0E-07 |
sp|Q38909|XTH28_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1 | 87 | 215 | 2.0E-06 |
sp|Q9SV60|XTH2_ARATH | Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1 | 94 | 228 | 3.0E-06 |
sp|Q8LDS2|XTH27_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2 | 57 | 217 | 6.0E-06 |
sp|P37073|GUB_BREBE | Beta-glucanase OS=Brevibacillus brevis GN=bglBB PE=1 SV=1 | 76 | 211 | 6.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
GO:0005975 | carbohydrate metabolic process | Yes |
GO:0016787 | hydrolase activity | No |
GO:0071704 | organic substance metabolic process | No |
GO:0044238 | primary metabolic process | No |
GO:0003824 | catalytic activity | No |
GO:0008150 | biological_process | No |
GO:0003674 | molecular_function | No |
GO:0008152 | metabolic process | No |
GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | 0.146 | 0.0653 | 0.8449 | 0.4018 | 0.0443 | 0.0188 | 0.3945 | 0.2124 | 0.2122 | 0.0054 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 24 | 0.999828 |
CAZyme category | E-value | Start | End |
---|---|---|---|
GH16_18 | 2.4E-66 | 71 | 227 |
Orthofinder run ID | 4 |
Orthogroup | 197 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4730 MRRHGSTFVVLLLLLSILSEAISAQTYSRCNPLNTQQCPANTALGMSVNIDFRKGSVNSFVAAGSPSYGSEGVSF TVSQGGQAPQLNSLFYIMFGRVDITIKAAPGAGIVSSVVLESDDLDEIDMEWLGGNENEMQSNYFGKGKTTDYNR GRFHSVSGTQARFVTYTVDWTPDRIVWAADDNILRVLAQPEAEAGQYPQTPMRVKFGAWAGGDAAFNPPGTVAWA RGPTDYSRGPFSMLVRSVAVTDYSTGKQYRYRDQSGSSSSIEAVGGTVNGNANRNALPVSPAAAAGNAASRSGGP ASIPVGGLAPDGSPATRTQTGWPWVPGASPTGGPIPSGWHMTADGKIMRDASAASRRGLSSPVLLSLLLSAAAGI MS |
Coding | >Ophio5|4730 ATGAGACGACATGGTTCAACATTCGTCGTCCTGCTACTACTACTCAGTATCCTCAGCGAAGCCATCTCAGCCCAA ACCTATAGTCGATGCAATCCCCTCAACACCCAGCAATGCCCCGCCAATACGGCGCTCGGCATGTCGGTCAACATC GACTTCCGCAAAGGCAGCGTAAACTCGTTTGTTGCCGCCGGAAGTCCGTCGTACGGTTCGGAAGGCGTCTCGTTT ACCGTCTCGCAAGGCGGCCAGGCACCTCAGCTCAACTCGCTCTTTTACATCATGTTCGGCCGAGTCGATATCACC ATCAAGGCCGCCCCCGGAGCCGGTATCGTCTCCTCCGTCGTGCTCGAGTCGGATGATCTCGATGAGATTGACATG GAGTGGCTCGGTGGTAATGAAAATGAGATGCAGTCTAATTACTTTGGCAAGGGGAAGACGACCGACTATAATCGT GGCAGGTTCCATTCCGTGTCCGGAACCCAGGCCCGCTTCGTCACCTACACCGTCGACTGGACCCCTGATCGCATC GTCTGGGCCGCTGACGACAACATCCTTCGCGTCCTTGCTCAGCCGGAAGCCGAAGCCGGCCAATACCCGCAGACG CCCATGCGCGTCAAGTTCGGCGCCTGGGCCGGCGGCGATGCGGCCTTTAACCCGCCCGGCACCGTAGCCTGGGCC CGCGGGCCGACCGACTACAGCCGCGGGCCCTTTTCCATGCTGGTCCGGTCCGTGGCCGTGACCGACTACTCGACC GGGAAACAGTATCGGTACCGGGACCAGTCCGGTTCGTCCTCGTCCATCGAGGCCGTCGGTGGCACCGTCAACGGC AACGCCAATCGCAACGCCCTCCCCGTCTCTCCCGCCGCCGCCGCCGGAAACGCCGCCTCCCGGTCCGGTGGCCCG GCCTCGATCCCCGTCGGCGGCCTCGCCCCCGACGGCAGCCCCGCCACGCGAACCCAGACCGGCTGGCCTTGGGTC CCCGGCGCCAGCCCGACCGGCGGCCCTATCCCCAGCGGTTGGCACATGACGGCCGACGGCAAGATTATGCGTGAC GCTTCGGCCGCCTCCCGCCGAGGGCTTTCGTCGCCCGTGCTCTTGTCACTGCTGCTGTCCGCGGCCGCCGGAATC ATGTCA |
Transcript | >Ophio5|4730 ATGAGACGACATGGTTCAACATTCGTCGTCCTGCTACTACTACTCAGTATCCTCAGCGAAGCCATCTCAGCCCAA ACCTATAGTCGATGCAATCCCCTCAACACCCAGCAATGCCCCGCCAATACGGCGCTCGGCATGTCGGTCAACATC GACTTCCGCAAAGGCAGCGTAAACTCGTTTGTTGCCGCCGGAAGTCCGTCGTACGGTTCGGAAGGCGTCTCGTTT ACCGTCTCGCAAGGCGGCCAGGCACCTCAGCTCAACTCGCTCTTTTACATCATGTTCGGCCGAGTCGATATCACC ATCAAGGCCGCCCCCGGAGCCGGTATCGTCTCCTCCGTCGTGCTCGAGTCGGATGATCTCGATGAGATTGACATG GAGTGGCTCGGTGGTAATGAAAATGAGATGCAGTCTAATTACTTTGGCAAGGGGAAGACGACCGACTATAATCGT GGCAGGTTCCATTCCGTGTCCGGAACCCAGGCCCGCTTCGTCACCTACACCGTCGACTGGACCCCTGATCGCATC GTCTGGGCCGCTGACGACAACATCCTTCGCGTCCTTGCTCAGCCGGAAGCCGAAGCCGGCCAATACCCGCAGACG CCCATGCGCGTCAAGTTCGGCGCCTGGGCCGGCGGCGATGCGGCCTTTAACCCGCCCGGCACCGTAGCCTGGGCC CGCGGGCCGACCGACTACAGCCGCGGGCCCTTTTCCATGCTGGTCCGGTCCGTGGCCGTGACCGACTACTCGACC GGGAAACAGTATCGGTACCGGGACCAGTCCGGTTCGTCCTCGTCCATCGAGGCCGTCGGTGGCACCGTCAACGGC AACGCCAATCGCAACGCCCTCCCCGTCTCTCCCGCCGCCGCCGCCGGAAACGCCGCCTCCCGGTCCGGTGGCCCG GCCTCGATCCCCGTCGGCGGCCTCGCCCCCGACGGCAGCCCCGCCACGCGAACCCAGACCGGCTGGCCTTGGGTC CCCGGCGCCAGCCCGACCGGCGGCCCTATCCCCAGCGGTTGGCACATGACGGCCGACGGCAAGATTATGCGTGAC GCTTCGGCCGCCTCCCGCCGAGGGCTTTCGTCGCCCGTGCTCTTGTCACTGCTGCTGTCCGCGGCCGCCGGAATC ATGTCATAG |
Gene | >Ophio5|4730 ATGAGACGACATGGTTCAACATTCGTCGTCCTGCTACTACTACTCAGTATCCTCAGCGAAGCCATCTCAGCCCAA ACCTATAGTCGATGCAATCCCCTCAACAGTAAGCCCNNNCCCCCCCCCCCCCTCCCTTTTCCCCGCGCTCAAAAA AAAAAAAAAAAAAAGCCCAGCAATGCCCCGCCAATACGGCGCTCGGCATGTCGGTCAACATCGACTTCCGCAAAG GCAGCGTAAACTCGTTTGTTGCCGCCGGAAGTCCGTCGTACGGTTCGGAAGGCGTCTCGTTTACCGTCTCGCAAG GCGGCCAGGCACCTCAGCTCAACTCGCTCTTTTACATCATGTTCGGCCGAGTCGATATCACCATCAAGGCCGCCC CCGGAGCCGGTATCGTCTCCTCCGTCGTGCTCGAGTCGGATGATCTCGATGAGATTGACATGGAGTGGCTCGGTG GTAATGAAAATGAGATGCAGTCTAATTACTTTGGCAAGGGGAAGACGACCGACTATAATCGTGGCAGGTTCCATT CCGTGTCCGGAACCCAGGCCCGCTTCGTCACCTACACCGTCGACTGGACCCCTGATCGCATCGTCTGGGCCGCTG ACGACAACATCCTTCGCGTCCTTGCTCAGCCGGAAGCCGAAGCCGGCCAATACCCGCAGACGCCCATGCGCGTCA AGTTCGGCGCCTGGGCCGGCGGCGATGCGGCCTTTAACCCGCCCGGCACCGTAGCCTGGGCCCGCGGGCCGACCG ACTACAGCCGCGGGCCCTTTTCCATGCTGGTCCGGTCCGTGGCCGTGACCGACTACTCGACCGGGAAACAGTATC GGTACCGGGACCAGTCCGGTTCGTCCTCGTCCATCGAGGCCGTCGGTGGCACCGTCAACGGCAACGCCAATCGCA ACGCCCTCCCCGTCTCTCCCGCCGCCGCCGCCGGAAACGCCGCCTCCCGGTCCGGTGGCCCGGCCTCGATCCCCG TCGGCGGCCTCGCCCCCGACGGCAGCCCCGCCACGCGAACCCAGACCGGCTGGCCTTGGGTCCCCGGCGCCAGCC CGACCGGCGGCCCTATCCCCAGCGGTTGGCACATGACGGCCGACGGCAAGATTATGCGTGACGCTTCGGCCGCCT CCCGCCGAGGGCTTTCGTCGCCCGTGCTCTTGTCACTGCTGCTGTCCGCGGCCGCCGGAATCATGTCATAG |