Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4700
Gene name
Locationscaffold_375:11841..12875
Strand-
Gene length (bp)1034
Transcript length (bp)795
Coding sequence length (bp)792
Protein length (aa) 264

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 5 24 19
2 122 144 22
3 241 263 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4700
MRVDLALLLALCLGDTVALALDAATSRNLLYRRRGGGAAGGGGRGAGGGGGSGRGAGGGRGSTTGGGGRGAGGGG
GGSSRPNTTPTSNLGGTSRGGSGPKPSFGGGRFYGGGGRVPYRAGAISPLGIAPFFLVGTALAFWPGLWLHGAHL
YPYSYVHQYHNASSGRDESAKVLCGCDEFEVCGCDENDDKAFYDGLIGNGSYDALNKSVIDVGEFRGQKTLFING
TLPNGTTADGPDSAGASLSAVFTAVASALWMAIFAALFL
Coding >Ophio5|4700
ATGCGAGTCGACTTGGCGCTGCTGCTGGCGCTCTGTCTGGGCGATACCGTCGCCCTCGCCCTCGATGCTGCGACG
AGCCGGAATCTGCTCTACAGACGCAGAGGTGGCGGCGCCGCGGGGGGCGGCGGTAGAGGAGCCGGCGGCGGGGGA
GGAAGCGGTAGGGGAGCCGGCGGAGGCCGAGGCAGTACAACAGGCGGCGGTGGCAGAGGAGCCGGCGGCGGAGGA
GGAGGTTCATCGCGCCCAAACACGACACCCACCTCCAACCTAGGCGGCACCTCTCGCGGCGGCTCCGGCCCGAAA
CCGAGCTTCGGCGGCGGTCGCTTCTACGGTGGCGGCGGACGAGTGCCGTACCGAGCCGGCGCCATAAGCCCCCTC
GGCATCGCGCCCTTCTTCCTCGTCGGGACCGCCCTCGCCTTCTGGCCGGGCCTCTGGCTCCACGGCGCCCACCTG
TACCCGTACTCGTACGTGCATCAGTATCACAACGCGTCGTCCGGCCGCGACGAGTCGGCCAAGGTCTTGTGCGGT
TGCGACGAGTTCGAGGTGTGCGGCTGCGACGAAAACGATGACAAGGCCTTCTATGACGGTCTCATCGGCAACGGC
AGCTACGATGCCCTCAACAAGAGCGTCATCGATGTCGGTGAGTTCCGGGGCCAGAAGACGCTCTTCATCAACGGC
ACACTCCCCAACGGGACCACGGCCGACGGGCCTGATTCGGCTGGCGCCAGCCTTTCAGCTGTTTTCACGGCCGTG
GCATCGGCCCTCTGGATGGCCATTTTCGCGGCCTTGTTTCTC
Transcript >Ophio5|4700
ATGCGAGTCGACTTGGCGCTGCTGCTGGCGCTCTGTCTGGGCGATACCGTCGCCCTCGCCCTCGATGCTGCGACG
AGCCGGAATCTGCTCTACAGACGCAGAGGTGGCGGCGCCGCGGGGGGCGGCGGTAGAGGAGCCGGCGGCGGGGGA
GGAAGCGGTAGGGGAGCCGGCGGAGGCCGAGGCAGTACAACAGGCGGCGGTGGCAGAGGAGCCGGCGGCGGAGGA
GGAGGTTCATCGCGCCCAAACACGACACCCACCTCCAACCTAGGCGGCACCTCTCGCGGCGGCTCCGGCCCGAAA
CCGAGCTTCGGCGGCGGTCGCTTCTACGGTGGCGGCGGACGAGTGCCGTACCGAGCCGGCGCCATAAGCCCCCTC
GGCATCGCGCCCTTCTTCCTCGTCGGGACCGCCCTCGCCTTCTGGCCGGGCCTCTGGCTCCACGGCGCCCACCTG
TACCCGTACTCGTACGTGCATCAGTATCACAACGCGTCGTCCGGCCGCGACGAGTCGGCCAAGGTCTTGTGCGGT
TGCGACGAGTTCGAGGTGTGCGGCTGCGACGAAAACGATGACAAGGCCTTCTATGACGGTCTCATCGGCAACGGC
AGCTACGATGCCCTCAACAAGAGCGTCATCGATGTCGGTGAGTTCCGGGGCCAGAAGACGCTCTTCATCAACGGC
ACACTCCCCAACGGGACCACGGCCGACGGGCCTGATTCGGCTGGCGCCAGCCTTTCAGCTGTTTTCACGGCCGTG
GCATCGGCCCTCTGGATGGCCATTTTCGCGGCCTTGTTTCTCTAA
Gene >Ophio5|4700
ATGCGAGTCGACTTGGCGCTGCTGCTGGCGCTCTGTCTGGGCGATACCGTCGCCCTCGCCCTCGATGCTGCGACG
AGCCGGAATCTGCTCTACAGACGCAGAGGTGGCGGCGCCGCGGGGGGCGGCGGTAGAGGAGCCGGCGGCGGGGGA
GGAAGCGGTAGGGGAGCCGGCGGAGGCCGAGGCAGTACAACAGGCGGCGGTGGCAGAGGAGCCGGCGGCGGAGGA
GGAGGTTCATCGTGAGTCAACCGTCGTGATTTCTCCCATTCCCTAACCCTGTGAGGCAGGGGGGCGAAGGTGGCG
CCCATCTCCCGAGGCCTGGGCGACTCTCCCTCACGACCATTCTTGCATCTCTTGGTGTCACTCTTTCTTCCTCAC
GAGGGAGGGGTGGCCAAAGAAGAAAATTGCAGAGCCACACACGTCGTCGATTGCTAATCATCATAACCTTTGTTC
CTTTAAACTGACCTCGAGCAAATAGGCGCCCAAACACGACACCCACCTCCAACCTAGGCGGCACCTCTCGCGGCG
GCTCCGGCCCGAAACCGAGCTTCGGCGGCGGTCGCTTCTACGGTGGCGGCGGACGAGTGCCGTACCGAGCCGGCG
CCATAAGCCCCCTCGGCATCGCGCCCTTCTTCCTCGTCGGGACCGCCCTCGCCTTCTGGCCGGGCCTCTGGCTCC
ACGGCGCCCACCTGTACCCGTACTCGTACGTGCATCAGTATCACAACGCGTCGTCCGGCCGCGACGAGTCGGCCA
AGGTCTTGTGCGGTTGCGACGAGTTCGAGGTGTGCGGCTGCGACGAAAACGATGACAAGGCCTTCTATGACGGTC
TCATCGGCAACGGCAGCTACGATGCCCTCAACAAGAGCGTCATCGATGTCGGTGAGTTCCGGGGCCAGAAGACGC
TCTTCATCAACGGCACACTCCCCAACGGGACCACGGCCGACGGGCCTGATTCGGCTGGCGCCAGCCTTTCAGCTG
TTTTCACGGCCGTGGCATCGGCCCTCTGGATGGCCATTTTCGCGGCCTTGTTTCTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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