© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|4642 |
| Gene name | |
| Location | scaffold_37:46617..47291 |
| Strand | - |
| Gene length (bp) | 674 |
| Transcript length (bp) | 378 |
| Coding sequence length (bp) | 375 |
| Protein length (aa) | 125 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02136 | NTF2 | Nuclear transport factor 2 (NTF2) domain | 2.0E-31 | 7 | 121 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P87102|NTF2_NEUCR | Nuclear transport factor 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ntf2 PE=2 SV=1 | 3 | 123 | 5.0E-46 |
| sp|Q96VN3|NTF2_EMENI | Nuclear transport factor 2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ntf2 PE=3 SV=1 | 1 | 124 | 8.0E-46 |
| sp|Q8NJ52|NTF2_DAVTA | Nuclear transport factor 2 OS=Davidiella tassiana GN=NTF2 PE=1 SV=1 | 1 | 124 | 2.0E-45 |
| sp|Q10100|NTF2_SCHPO | Nuclear transport factor 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ntf2 PE=3 SV=2 | 1 | 125 | 6.0E-42 |
| sp|Q6CQX4|NTF2_KLULA | Nuclear transport factor 2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=NTF2 PE=3 SV=1 | 3 | 125 | 2.0E-41 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P87102|NTF2_NEUCR | Nuclear transport factor 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ntf2 PE=2 SV=1 | 3 | 123 | 5.0E-46 |
| sp|Q96VN3|NTF2_EMENI | Nuclear transport factor 2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ntf2 PE=3 SV=1 | 1 | 124 | 8.0E-46 |
| sp|Q8NJ52|NTF2_DAVTA | Nuclear transport factor 2 OS=Davidiella tassiana GN=NTF2 PE=1 SV=1 | 1 | 124 | 2.0E-45 |
| sp|Q10100|NTF2_SCHPO | Nuclear transport factor 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ntf2 PE=3 SV=2 | 1 | 125 | 6.0E-42 |
| sp|Q6CQX4|NTF2_KLULA | Nuclear transport factor 2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=NTF2 PE=3 SV=1 | 3 | 125 | 2.0E-41 |
| sp|Q6FRC6|NTF2_CANGA | Nuclear transport factor 2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=NTF2 PE=3 SV=1 | 3 | 125 | 2.0E-41 |
| sp|Q9P926|NTF2_CANAX | Nuclear transport factor 2 OS=Candida albicans GN=NTF2 PE=3 SV=1 | 3 | 125 | 1.0E-40 |
| sp|Q75AA5|NTF2_ASHGO | Nuclear transport factor 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NTF2 PE=3 SV=1 | 3 | 125 | 1.0E-40 |
| sp|Q6BWC0|NTF2_DEBHA | Nuclear transport factor 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=NTF2 PE=3 SV=1 | 3 | 124 | 3.0E-39 |
| sp|P33331|NTF2_YEAST | Nuclear transport factor 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NTF2 PE=1 SV=2 | 3 | 125 | 5.0E-39 |
| sp|Q6CC82|NTF2_YARLI | Nuclear transport factor 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=NTF2 PE=3 SV=1 | 3 | 122 | 4.0E-33 |
| sp|Q9XJ54|NTF2_ORYSJ | Nuclear transport factor 2 OS=Oryza sativa subsp. japonica GN=NTF2 PE=2 SV=1 | 5 | 125 | 1.0E-31 |
| sp|Q9C7F5|NTF2_ARATH | Nuclear transport factor 2 OS=Arabidopsis thaliana GN=NTF2 PE=1 SV=1 | 5 | 124 | 1.0E-29 |
| sp|Q86HW7|NTF2_DICDI | Nuclear transport factor 2 OS=Dictyostelium discoideum GN=nutf2 PE=1 SV=1 | 7 | 123 | 1.0E-20 |
| sp|Q21735|NTF2_CAEEL | Probable nuclear transport factor 2 OS=Caenorhabditis elegans GN=ran-4 PE=3 SV=1 | 3 | 122 | 2.0E-17 |
| sp|Q5R8G4|NTF2_PONAB | Nuclear transport factor 2 OS=Pongo abelii GN=NUTF2 PE=2 SV=1 | 4 | 123 | 3.0E-16 |
| sp|P61972|NTF2_RAT | Nuclear transport factor 2 OS=Rattus norvegicus GN=Nutf2 PE=1 SV=1 | 4 | 123 | 3.0E-16 |
| sp|P61971|NTF2_MOUSE | Nuclear transport factor 2 OS=Mus musculus GN=Nutf2 PE=1 SV=1 | 4 | 123 | 3.0E-16 |
| sp|P61970|NTF2_HUMAN | Nuclear transport factor 2 OS=Homo sapiens GN=NUTF2 PE=1 SV=1 | 4 | 123 | 3.0E-16 |
| sp|Q32KP9|NTF2_BOVIN | Nuclear transport factor 2 OS=Bos taurus GN=NUTF2 PE=2 SV=1 | 4 | 123 | 3.0E-16 |
| sp|O42242|NTF2_XENLA | Nuclear transport factor 2 OS=Xenopus laevis GN=ntf2 PE=2 SV=1 | 4 | 122 | 6.0E-16 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 32 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|4642 MSNYEEIAKQFIEIYYNAFDSDRKSLLSLYREQSMLTFESASCCGSNNIVEKLVSLHFANVKHQVATLDAQPSIA EGGIFIMVTGQLLVDDEQHPMNYTQAFQLARDPSNGQYFVFNDIFKLVYG |
| Coding | >Ophio5|4642 ATGAGTAACTACGAAGAAATCGCGAAGCAATTTATTGAAATCTACTACAATGCCTTTGACTCGGATCGCAAGTCG CTCCTCTCACTCTACCGTGAACAGTCGATGCTCACCTTCGAGTCCGCCTCGTGCTGTGGATCCAACAACATCGTC GAGAAGCTGGTGTCCCTACACTTTGCCAATGTCAAGCACCAGGTCGCCACGCTCGACGCACAGCCATCCATCGCG GAGGGTGGCATCTTCATCATGGTAACAGGCCAGCTGTTGGTCGACGATGAGCAGCACCCCATGAACTACACGCAG GCTTTCCAGTTGGCGCGCGACCCGTCCAATGGCCAATACTTTGTTTTCAACGACATCTTCAAGCTGGTTTACGGT |
| Transcript | >Ophio5|4642 ATGAGTAACTACGAAGAAATCGCGAAGCAATTTATTGAAATCTACTACAATGCCTTTGACTCGGATCGCAAGTCG CTCCTCTCACTCTACCGTGAACAGTCGATGCTCACCTTCGAGTCCGCCTCGTGCTGTGGATCCAACAACATCGTC GAGAAGCTGGTGTCCCTACACTTTGCCAATGTCAAGCACCAGGTCGCCACGCTCGACGCACAGCCATCCATCGCG GAGGGTGGCATCTTCATCATGGTAACAGGCCAGCTGTTGGTCGACGATGAGCAGCACCCCATGAACTACACGCAG GCTTTCCAGTTGGCGCGCGACCCGTCCAATGGCCAATACTTTGTTTTCAACGACATCTTCAAGCTGGTTTACGGT TGA |
| Gene | >Ophio5|4642 ATGAGTAGTAAGCGCATGAGCCCGTCGTGGCGGGAGAGACGGCGGCTAACCATGAGGAAATAGACTACGAAGAAA TCGCGAGTATGCATTCATCACCTTGACCAGAGTCCGGCGGAAGCACCTCCCTGACGTACGACAGAGCAATTTATT GAAATCTACTACAATGCCTTTGACTCGGATCGCAAGTCGCTCCTCTCACTCTACGTGCGTGCGCTCTCCACACTC GTCCATGATTGAGGGCGCCGGCTGACTTGCCCCGCAGCGTGAACAGTCGATGCTCACCTTCGAGTCCGCCTCGTG CTGTGGATCCAACAACATCGTCGAGAAGCTGGTGGTGCGTGAGCCCAGCTTCTGCAACCGCTCTGGCCTCGGTCT GGCTGACCTTTCGTCTCGTCACAGTCCCTACACTTTGCCAATGTCAAGCACCAGGTCGCCACGCTCGACGCACAG CCATCCATCGCGGAGGGTGGCATCTTCATCATGGTAACAGGCCAGCTGTTGGTACGAATGTCTGTCTCCAATTTT CAAGGAAACATGCCGACTAATCCACCCACTCCTAGGTCGACGATGAGCAGCACCCCATGAACTACACGCAGGCTT TCCAGTTGGCGCGCGACCCGTCCAATGGCCAATACTTTGTTTTCAACGACATCTTCAAGCTGGTTTACGGTTGA |