Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4624
Gene name
Locationscaffold_369:12147..14166
Strand+
Gene length (bp)2019
Transcript length (bp)1545
Coding sequence length (bp)1542
Protein length (aa) 514

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02752 Arrestin_C Arrestin (or S-antigen), C-terminal domain 1.7E-13 299 454

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O42956|ART1_SCHPO Arrestin family protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=art1 PE=3 SV=1 214 472 1.0E-23

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 48 70 22
2 91 113 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4624
MHHVVDLPVDICRLSIHAFLRIRLAWDLKAMRIEDTRVPGYLIGPDAVVRPSWAVLYYLLPTTYLLPTYLPRGCL
SAPDAPITTLTLRLEGVAFVIVVVVVIIVIAVIAVPSAQISHVRVSGPPNSSFLVGYPGISATLPRIEGKVEIRP
GQGYSMPVSVSLVRICLQRRETIHPDAESLTKRHLGTPRRETADVVGKEVLLFRCSTGKEAESVMAMDLPFVLFI
PFGRGGEETNRRIPPASLQLPSRTAETYYELVVTIQQGHSHQYKFSFPMPLQRYDTLSTFGMYNKPETKLVTADN
VVHLGINLPRWSFGPNDPITVYLKLSPNPDWMTKARRVTIEKITLAIEEEITFNPEGDEPTKKVNKLSKQAQIVK
MKMPEAGYATNIGLVFPSKDLRDPDGIVKRGRPAFPLYEVGSFTTTSSLYKIEFYVTIKVQLSGARDVSLRQPVV
ICPLDQQGCKEEMDAIEQAAKDAALVDPNNPMLPARTIVLASDRDALRSLGLCTVGGQKKPFID
Coding >Ophio5|4624
ATGCACCATGTAGTGGATCTGCCGGTCGACATTTGCCGTCTCTCGATCCATGCCTTTCTACGGATCCGTCTGGCT
TGGGACTTGAAGGCTATGAGGATAGAGGATACGCGTGTACCTGGTTATCTTATCGGCCCCGACGCCGTCGTGCGC
CCATCCTGGGCCGTCCTCTACTACCTCCTACCTACTACCTACCTACTACCTACCTACCTACCTAGAGGCTGTCTT
TCCGCCCCTGACGCTCCAATCACCACTTTGACACTGCGCCTCGAGGGAGTCGCCTTCGTCATCGTCGTCGTCGTC
GTCATCATTGTCATCGCTGTCATCGCCGTGCCATCGGCGCAAATCAGTCACGTGAGGGTCTCGGGGCCCCCCAAC
AGCAGCTTTCTCGTCGGATACCCGGGTATCTCGGCCACGCTCCCGCGCATCGAGGGCAAGGTCGAGATCCGCCCC
GGCCAGGGCTACTCCATGCCCGTCTCCGTCTCCCTCGTCCGTATCTGTCTGCAGCGCCGCGAGACGATACATCCC
GATGCCGAGAGCCTGACAAAGCGTCACCTCGGCACCCCCCGTCGCGAGACTGCCGACGTGGTCGGTAAGGAAGTG
CTGCTCTTTCGATGCTCCACCGGAAAGGAGGCCGAGAGCGTCATGGCCATGGACCTGCCCTTTGTCCTCTTCATC
CCCTTCGGCCGCGGCGGTGAGGAGACGAACCGACGGATTCCGCCGGCCTCGCTACAGCTCCCCAGCCGGACCGCC
GAGACCTATTACGAGCTCGTCGTCACCATCCAGCAGGGTCACAGCCACCAGTACAAGTTCAGTTTCCCCATGCCG
CTACAGCGCTACGACACCCTCTCGACCTTCGGAATGTACAACAAGCCCGAGACCAAGCTTGTCACCGCCGACAAC
GTCGTTCACCTCGGCATCAACTTGCCGCGCTGGAGCTTCGGTCCCAACGACCCCATTACCGTCTACCTCAAGCTG
TCTCCCAACCCGGACTGGATGACCAAGGCCCGCCGCGTCACTATCGAGAAAATCACACTGGCCATCGAGGAGGAA
ATCACGTTTAACCCCGAAGGCGATGAGCCGACCAAGAAGGTCAACAAGCTGTCCAAGCAAGCCCAGATCGTCAAG
ATGAAGATGCCCGAGGCCGGATACGCCACCAACATAGGGCTGGTCTTCCCTTCCAAGGACCTAAGAGACCCGGAC
GGCATCGTCAAGCGGGGGAGGCCGGCGTTTCCTCTCTACGAGGTCGGCTCCTTTACCACCACCTCGAGTCTGTAC
AAGATTGAGTTTTACGTCACCATAAAGGTGCAACTCAGCGGCGCCCGTGATGTCAGCCTGAGGCAACCCGTCGTC
ATCTGTCCGCTGGACCAGCAGGGGTGCAAGGAGGAGATGGACGCCATCGAACAGGCTGCCAAGGACGCCGCCCTT
GTCGACCCCAACAATCCCATGCTCCCGGCCCGCACCATCGTCTTGGCCAGCGACCGCGACGCGCTGCGGAGCCTA
GGGCTGTGCACCGTCGGCGGCCAGAAGAAGCCCTTTATCGAC
Transcript >Ophio5|4624
ATGCACCATGTAGTGGATCTGCCGGTCGACATTTGCCGTCTCTCGATCCATGCCTTTCTACGGATCCGTCTGGCT
TGGGACTTGAAGGCTATGAGGATAGAGGATACGCGTGTACCTGGTTATCTTATCGGCCCCGACGCCGTCGTGCGC
CCATCCTGGGCCGTCCTCTACTACCTCCTACCTACTACCTACCTACTACCTACCTACCTACCTAGAGGCTGTCTT
TCCGCCCCTGACGCTCCAATCACCACTTTGACACTGCGCCTCGAGGGAGTCGCCTTCGTCATCGTCGTCGTCGTC
GTCATCATTGTCATCGCTGTCATCGCCGTGCCATCGGCGCAAATCAGTCACGTGAGGGTCTCGGGGCCCCCCAAC
AGCAGCTTTCTCGTCGGATACCCGGGTATCTCGGCCACGCTCCCGCGCATCGAGGGCAAGGTCGAGATCCGCCCC
GGCCAGGGCTACTCCATGCCCGTCTCCGTCTCCCTCGTCCGTATCTGTCTGCAGCGCCGCGAGACGATACATCCC
GATGCCGAGAGCCTGACAAAGCGTCACCTCGGCACCCCCCGTCGCGAGACTGCCGACGTGGTCGGTAAGGAAGTG
CTGCTCTTTCGATGCTCCACCGGAAAGGAGGCCGAGAGCGTCATGGCCATGGACCTGCCCTTTGTCCTCTTCATC
CCCTTCGGCCGCGGCGGTGAGGAGACGAACCGACGGATTCCGCCGGCCTCGCTACAGCTCCCCAGCCGGACCGCC
GAGACCTATTACGAGCTCGTCGTCACCATCCAGCAGGGTCACAGCCACCAGTACAAGTTCAGTTTCCCCATGCCG
CTACAGCGCTACGACACCCTCTCGACCTTCGGAATGTACAACAAGCCCGAGACCAAGCTTGTCACCGCCGACAAC
GTCGTTCACCTCGGCATCAACTTGCCGCGCTGGAGCTTCGGTCCCAACGACCCCATTACCGTCTACCTCAAGCTG
TCTCCCAACCCGGACTGGATGACCAAGGCCCGCCGCGTCACTATCGAGAAAATCACACTGGCCATCGAGGAGGAA
ATCACGTTTAACCCCGAAGGCGATGAGCCGACCAAGAAGGTCAACAAGCTGTCCAAGCAAGCCCAGATCGTCAAG
ATGAAGATGCCCGAGGCCGGATACGCCACCAACATAGGGCTGGTCTTCCCTTCCAAGGACCTAAGAGACCCGGAC
GGCATCGTCAAGCGGGGGAGGCCGGCGTTTCCTCTCTACGAGGTCGGCTCCTTTACCACCACCTCGAGTCTGTAC
AAGATTGAGTTTTACGTCACCATAAAGGTGCAACTCAGCGGCGCCCGTGATGTCAGCCTGAGGCAACCCGTCGTC
ATCTGTCCGCTGGACCAGCAGGGGTGCAAGGAGGAGATGGACGCCATCGAACAGGCTGCCAAGGACGCCGCCCTT
GTCGACCCCAACAATCCCATGCTCCCGGCCCGCACCATCGTCTTGGCCAGCGACCGCGACGCGCTGCGGAGCCTA
GGGCTGTGCACCGTCGGCGGCCAGAAGAAGCCCTTTATCGACTGA
Gene >Ophio5|4624
ATGCACCATGTAGTGGATCTGCCGGTCGACATTTGCCGTCTCTCGATCCATGCCTTTCTACGGATCCGTCTGGCT
TGGGACTTGAAGGCTATGAGGATAGAGGATACGCGTCCTACGTTCCAGCTCACGCTCCAGCAACGGGCACCAACG
GCTTCTTTCTACTGGGTTGTCCGCCTACTAACTACCTAGGTGTACCTGGTTATCTTATCGGCCCCGACGCCGTCG
TGCGCCCATCCTGGGCCGTCCTCTACTACCTCCTACCTACTACCTACCTACTACCTACCTACCTACCTAGAGGCT
GTCTTTCCGCCCCTGACGGTGAGCCGTTTTCGTGCTTCTCTCTTCCTACCTACCTTCCTACAATATTCTCTCCAT
TCCCTCAGCAGCCTATACATATCAGGTACTGCCGAGACATGCCCGTTGCTTCCCTTCTCTTCCCCATGCCGTTAC
ACGGCACCGCTGCCCCACCCCGATTGTGACTTTGGAAAGCAAGACTGAACCTCCAGCTCTCGAGTCAAAACAGCT
CCAATCACCACTTTGACACTGCGCCTCGAGGGAGTCGCCTTCGTCATCGTCGTCGTCGTCGTCATCATTGTCATC
GCTGTCATCGCCGTGCCATCGGCGCAAATCAGTCAGTCCTGGCACCAGCAGCATTGGCCGCGTCATGGCCTCCGC
CCCGGCCAGCGTGAGGGTCTCGGGGCCCCCCAACAGCAGCTTTCTCGTCGGATACCCGGGTATCTCGGCCACGCT
CGTACGTGACCCCCCTCACCCTCCTCTACTCCTCCAAATCATGTCGCTTGCCGCCTTCATTCCCTGCTGACGCCA
TATGACCAGCCGCGCATCGAGGGCAAGGTCGAGATCCGCCCCGGCCAGGGCTACTCCATGCCCGTCTCCGTCTCC
CTCGTCCGTATCTGTCTGCAGCGCCGCGAGACGATACATCCCGATGCCGAGAGCCTGACAAAGCGTCACCTCGGC
ACCCCCCGTCGCGAGACTGCCGACGTGGTCGGTAAGGAAGTGCTGCTCTTTCGATGCTCCACCGGAAAGGAGGCC
GAGAGCGTCATGGCCATGGACCTGCCCTTTGTCCTCTTCATCCCCTTCGGCCGCGGCGGTGAGGAGACGAACCGA
CGGATTCCGCCGGCCTCGCTACAGCTCCCCAGCCGGACCGCCGAGACCTATTACGAGCTCGTCGTCACCATCCAG
CAGGGTCACAGCCACCAGTACAAGTTCAGTTTCCCCATGCCGCTACAGCGCTACGACACCCTCTCGACCTTCGGA
ATGTACAACAAGCCCGAGACCAAGCTTGTCACCGCCGACAACGTCGTTCACCTCGGCATCAACTTGCCGCGCTGG
AGCTTCGGTCCCAACGACCCCATTACCGTCTACCTCAAGCTGTCTCCCAACCCGGACTGGATGACCAAGGCCCGC
CGCGTCACTATCGAGAAAATCACACTGGCCATCGAGGAGGAAATCACGTTTAACCCCGAAGGCGATGAGCCGACC
AAGAAGGTCAACAAGCTGTCCAAGCAAGCCCAGATCGTCAAGATGAAGATGCCCGAGGCCGGATACGCCACCAAC
ATAGGGCTGGTCTTCCCTTCCAAGGACCTAAGAGACCCGGACGGCATCGTCAAGCGGGGGAGGCCGGCGTTTCCT
CTCTACGAGGTCGGCTCCTTTACCACCACCTCGAGTCTGTACAAGATTGAGTTTTACGTCACCATAAAGGTAACC
GCCTCACCCGCCGCGTTGCTTCTTGTCTATTGCTGACGCCCGCTGCGCCAGGTGCAACTCAGCGGCGCCCGTGAT
GTCAGCCTGAGGCAACCCGTCGTCATCTGTCCGCTGGACCAGCAGGGGTGCAAGGAGGAGATGGACGCCATCGAA
CAGGCTGCCAAGGACGCCGCCCTTGTCGACCCCAACAATCCCATGCTCCCGGCCCGCACCATCGTCTTGGCCAGC
GACCGCGACGCGCTGCGGAGCCTAGGGCTGTGCACCGTCGGCGGCCAGAAGAAGCCCTTTATCGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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